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Prabhakar R. Gudla, Ph.D. - Publications

Affiliations: 
2005 University of Maryland, College Park, College Park, MD 
Area:
Biomedical Engineering
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1/31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2004 Gudla PR, Montas HJ, Shirmohamaddi A. Stochastic-wavelet preprocessing of heterogeneous data for finite element analysis Asae Annual International Meeting 2004. 3957-3972.  0.471
Low-probability matches (unlikely to be authored by this person)
2007 Sadegh Zadeh K, Montas HJ, Shirmohammadi A, Sadeghzadeh A, Gudla PR. A diagnosis-prescription system for nitrogen management in environment. Journal of Environmental Science and Health. Part a, Toxic/Hazardous Substances & Environmental Engineering. 42: 557-65. PMID 17454363 DOI: 10.1080/10934520701244003  0.227
2004 Stine CB, Smith DL, Vogelbein WK, Harshbarger JC, Gudla PR, Lipsky MM, Kane AS. Morphometry of hepatic neoplasms and altered foci in the mummichog, Fundulus heteroclitus. Toxicologic Pathology. 32: 375-83. PMID 15307209 DOI: 10.1080/01926230490440899  0.206
2009 Nandy K, Gudla PR, Meaburn KJ, Misteli T, Lockett SJ. Automatic nuclei segmentation and spatial FISH analysis for cancer detection. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 6718-21. PMID 19963931 DOI: 10.1109/IEMBS.2009.5332922  0.173
2007 Gudla PR, Collins J, Meaburn KJ, Misteli T, Lockett SJ. HiFLO - A high-throughput system for spatial analysis of FISH loci in interphase nuclei Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6441. DOI: 10.1117/12.700817  0.165
2012 Nandy K, Gudla PR, Amundsen R, Meaburn KJ, Misteli T, Lockett SJ. Automatic segmentation and supervised learning-based selection of nuclei in cancer tissue images. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 81: 743-54. PMID 22899462 DOI: 10.1002/Cyto.A.22097  0.132
2008 Gudla PR, Nandy K, Collins J, Meaburn KJ, Misteli T, Lockett SJ. A high-throughput system for segmenting nuclei using multiscale techniques. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 73: 451-66. PMID 18338778 DOI: 10.1002/Cyto.A.20550  0.122
2012 Cukierski WJ, Nandy K, Gudla P, Meaburn KJ, Misteli T, Foran DJ, Lockett SJ. Ranked retrieval of segmented nuclei for objective assessment of cancer gene repositioning. Bmc Bioinformatics. 13: 232. PMID 22971117 DOI: 10.1186/1471-2105-13-232  0.119
2020 Zaki G, Gudla PR, Lee K, Kim J, Ozbun L, Shachar S, Gadkari M, Sun J, Fraser IDC, Franco LM, Misteli T, Pegoraro G. A Deep Learning Pipeline for Nucleus Segmentation. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. PMID 33141508 DOI: 10.1002/cyto.a.24257  0.118
2011 Nandy K, Gudla PR, Amundsen R, Meaburn KJ, Misteli T, Lockett SJ. Supervised learning framework for screening nuclei in tissue sections. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2011: 5989-92. PMID 22255704 DOI: 10.1109/IEMBS.2011.6091480  0.108
2009 Cui C, JaJa J, Turbyville T, Beutler J, Gudla P, Nandy K, Lockett S. Quantifying the astrocytoma cell response to candidate pharmaceutical from F-ACTIN image analysis. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 5768-71. PMID 19963655 DOI: 10.1109/IEMBS.2009.5332528  0.087
2017 Gudla PR, Nakayama K, Pegoraro G, Misteli T. SpotLearn: Convolutional Neural Network for Detection of Fluorescence In Situ Hybridization (FISH) Signals in High-Throughput Imaging Approaches. Cold Spring Harbor Symposia On Quantitative Biology. PMID 29183987 DOI: 10.1101/sqb.2017.82.033761  0.086
2014 Nandy K, Kim J, McCullough DP, McAuliffe M, Meaburn KJ, Yamaguchi TP, Gudla PR, Lockett SJ. Segmentation and quantitative analysis of individual cells in developmental tissues. Methods in Molecular Biology (Clifton, N.J.). 1092: 235-53. PMID 24318825 DOI: 10.1007/978-1-60327-292-6_16  0.082
2010 Chen D, Motiejunaite R, Kazlauskas A, Gudla P, Collins J, Lockett S. Automatic image analysis method for quantification of tube formation by endothelial cells in vitro Progress in Biomedical Optics and Imaging - Proceedings of Spie. 7568. DOI: 10.1117/12.841290  0.074
2009 Meaburn KJ, Gudla PR, Khan S, Lockett SJ, Misteli T. Disease-specific gene repositioning in breast cancer. The Journal of Cell Biology. 187: 801-12. PMID 19995938 DOI: 10.1083/Jcb.200909127  0.068
2015 Nandy K, Gudla PR, Chellappa R, Lockett SJ. Probabilistic edge detection in 3D optical microscopy images of tissue samples Proceedings - International Symposium On Biomedical Imaging. 2015: 1462-1465. DOI: 10.1109/ISBI.2015.7164152  0.066
2008 McCullough DP, Gudla PR, Harris BS, Collins JA, Meaburn KJ, Nakaya MA, Yamaguchi TP, Misteli T, Lockett SJ. Segmentation of whole cells and cell nuclei from 3-D optical microscope images using dynamic programming. Ieee Transactions On Medical Imaging. 27: 723-34. PMID 18450544 DOI: 10.1109/TMI.2007.913135  0.062
2018 Jowhar Z, Gudla P, Shachar S, Wangsa D, Russ JL, Pegoraro G, Ried T, Raznahan A, Misteli T. HiCTMap: Detection and Analysis of Chromosome Territory Structure and Position by High-throughput Imaging. Methods (San Diego, Calif.). PMID 29408376 DOI: 10.1016/J.Ymeth.2018.01.013  0.059
2021 Wan Y, Anastasakis DG, Rodriguez J, Palangat M, Gudla P, Zaki G, Tandon M, Pegoraro G, Chow CC, Hafner M, Larson DR. Dynamic imaging of nascent RNA reveals general principles of transcription dynamics and stochastic splice site selection. Cell. PMID 33979654 DOI: 10.1016/j.cell.2021.04.012  0.056
2008 Takizawa T, Gudla PR, Guo L, Lockett S, Misteli T. Allele-specific nuclear positioning of the monoallelically expressed astrocyte marker GFAP. Genes & Development. 22: 489-98. PMID 18281462 DOI: 10.1101/gad.1634608  0.054
2014 Lockett S, Verma C, Brafman A, Gudla P, Nandy K, Mimaki Y, Fuchs PL, Jaja J, Reilly KM, Beutler J, Turbyville TJ. Quantitative analysis of F-actin redistribution in astrocytoma cells treated with candidate pharmaceuticals. Cytometry. Part a : the Journal of the International Society For Analytical Cytology. 85: 512-21. PMID 24515854 DOI: 10.1002/Cyto.A.22442  0.052
2007 McCullough DP, Gudla PR, Meaburn K, Kumar A, Kuehn M, Lockett SJ. 3D segmentation of whole cells and cell nuclei in tissue using dynamic programming 2007 4th Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 276-279. DOI: 10.1109/ISBI.2007.356842  0.048
2020 Goswami D, Chen, Yang Y, Gudla PR, Columbus J, Worthy K, Rigby M, Wheeler M, Mukhopadhyay S, Powell K, Burgan W, Wall V, Esposito D, Simanshu D, Lightstone FC, et al. Membrane interactions of the globular domain and the hypervariable region of KRAS4b define its unique diffusion behavior. Elife. 9. PMID 31958057 DOI: 10.7554/Elife.47654  0.042
2017 Comas-Garcia M, Datta SA, Baker L, Varma R, Gudla PR, Rein A. Dissection of specific binding of HIV-1 Gag to the "packaging signal" in viral RNA. Elife. 6. PMID 28726630 DOI: 10.7554/Elife.27055  0.038
2019 Gudla PR, Zaki G, Shachar S, Misteli T, Pegoraro G. Deep Learning Based Segmentation of Nuclei from Fluorescence Microscopy Images Microscopy and Microanalysis. 25: 1376-1377. DOI: 10.1017/S143192761900761X  0.037
2014 Crites TJ, Padhan K, Muller J, Krogsgaard M, Gudla PR, Lockett SJ, Varma R. TCR Microclusters pre-exist and contain molecules necessary for TCR signal transduction. Journal of Immunology (Baltimore, Md. : 1950). 193: 56-67. PMID 24860189 DOI: 10.4049/jimmunol.1400315  0.034
2014 Rao RP, Scheffer L, Srideshikan SM, Parthibane V, Kosakowska-Cholody T, Masood MA, Nagashima K, Gudla P, Lockett S, Acharya U, Acharya JK. Ceramide transfer protein deficiency compromises organelle function and leads to senescence in primary cells. Plos One. 9: e92142. PMID 24642596 DOI: 10.1371/journal.pone.0092142  0.034
2010 Van Prooyen N, Gold H, Andresen V, Schwartz O, Jones K, Ruscetti F, Lockett S, Gudla P, Venzon D, Franchini G. Human T-cell leukemia virus type 1 p8 protein increases cellular conduits and virus transmission. Proceedings of the National Academy of Sciences of the United States of America. 107: 20738-43. PMID 21076035 DOI: 10.1073/Pnas.1009635107  0.033
2018 Jowhar Z, Shachar S, Gudla PR, Wangsa D, Torres E, Russ JL, Pegoraro G, Ried T, Raznahan A, Misteli T. Effects of Human Sex Chromosome Dosage on Spatial Chromosome Organization. Molecular Biology of the Cell. mbcE18060359. PMID 30091656 DOI: 10.1091/Mbc.E18-06-0359  0.029
2019 Stavreva DA, Garcia DA, Fettweis G, Gudla PR, Zaki GF, Soni V, McGowan A, Williams G, Huynh A, Palangat M, Schiltz RL, Johnson TA, Presman DM, Ferguson ML, Pegoraro G, et al. Transcriptional Bursting and Co-bursting Regulation by Steroid Hormone Release Pattern and Transcription Factor Mobility. Molecular Cell. PMID 31421980 DOI: 10.1016/J.Molcel.2019.06.042  0.027
2020 Sebastian R, Hosogane EK, Sun EG, Tran AD, Reinhold WC, Burkett S, Sturgill DM, Gudla PR, Pommier Y, Aladjem MI, Oberdoerffer P. Epigenetic Regulation of DNA Repair Pathway Choice by MacroH2A1 Splice Variants Ensures Genome Stability. Molecular Cell. PMID 32649884 DOI: 10.1016/J.Molcel.2020.06.028  0.025
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