Hariharan Subramanian, Ph.D. - Publications

Affiliations: 
2009 Biomedical Engineering Northwestern University, Evanston, IL 
Area:
Biomedical Engineering

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Zhou X, Gladstein S, Almassalha LM, Li Y, Eshein A, Cherkezyan L, Viswanathan P, Subramanian H, Szleifer I, Backman V. Preservation of cellular nano-architecture by the process of chemical fixation for nanopathology. Plos One. 14: e0219006. PMID 31329606 DOI: 10.1371/journal.pone.0219006  1
2019 Gladstein S, Almassalha LM, Cherkezyan L, Chandler JE, Eshein A, Eid A, Zhang D, Wu W, Bauer GM, Stephens AD, Morochnik S, Subramanian H, Marko JF, Ameer GA, Szleifer I, et al. Multimodal interference-based imaging of nanoscale structure and macromolecular motion uncovers UV induced cellular paroxysm. Nature Communications. 10: 1652. PMID 30971691 DOI: 10.1038/s41467-019-09717-6  1
2018 D'Costa S, Ayyadurai S, Gibson AJ, Mackey E, Rajput M, Sommerville LJ, Wilson N, Li Y, Kubat E, Kumar A, Subramanian H, Bhargava A, Moeser AJ. Mast Cell CRF Suppresses Mast Cell Degranulation and Limits the Severity of Anaphylaxis and Stress-Induced Intestinal Permeability. The Journal of Allergy and Clinical Immunology. PMID 30439403 DOI: 10.1016/j.jaci.2018.08.053  0.48
2018 Spicer GLC, Almassalha L, Martinez IA, Ellis R, Chandler JE, Gladstein S, Zhang D, Nguyen TQ, Feder S, Subramanian H, de la Rica R, Thompson SA, Backman V. Label free localization of nanoparticles in live cancer cells using spectroscopic microscopy. Nanoscale. PMID 30298892 DOI: 10.1039/c8nr07481j  1
2018 Kalman R, Stawarz A, Nunes D, Zhang D, Dela Cruz MA, Mohanty A, Subramanian H, Backman V, Roy HK. Biophotonic detection of high order chromatin alterations in field carcinogenesis predicts risk of future hepatocellular carcinoma: A pilot study. Plos One. 13: e0197427. PMID 29771950 DOI: 10.1371/journal.pone.0197427  1
2018 Gladstein S, Damania D, Almassalha LM, Smith LT, Gupta V, Subramanian H, Rex DK, Roy HK, Backman V. Correlating colorectal cancer risk with field carcinogenesis progression using partial wave spectroscopic microscopy. Cancer Medicine. PMID 29573208 DOI: 10.1002/cam4.1357  1
2018 Gladstein S, Stawarz A, Almassalha LM, Cherkezyan L, Chandler JE, Zhou X, Subramanian H, Backman V. Measuring Nanoscale Chromatin Heterogeneity with Partial Wave Spectroscopic Microscopy. Methods in Molecular Biology (Clifton, N.J.). 1745: 337-360. PMID 29476478 DOI: 10.1007/978-1-4939-7680-5_19  1
2017 Bauer GM, Stypula-Cyrus Y, Subramanian H, Cherkezyan L, Viswanathan P, Zhang D, Iyengar R, Bagalkar S, Derbas J, Graff T, Gladstein S, Almassalha LM, Chandler JE, Roy HK, Backman V. The transformation of the nuclear nanoarchitecture in human field carcinogenesis. Future Science Oa. 3: FSO206. PMID 28884003 DOI: 10.4155/fsoa-2017-0027  1
2017 Li Y, Almassalha LM, Chandler JE, Zhou X, Stypula-Cyrus YE, Hujsak KA, Roth EW, Bleher R, Subramanian H, Szleifer I, Dravid VP, Backman V. The Effects of Chemical Fixation on The Cellular Nanostructure. Experimental Cell Research. PMID 28673821 DOI: 10.1016/j.yexcr.2017.06.022  1
2017 Li Y, Zhang D, Capoglu I, Hujsak KA, Damania D, Cherkezyan L, Roth E, Bleher R, Wu JS, Subramanian H, Dravid VP, Backman V. Measuring the Autocorrelation Function of Nanoscale Three-Dimensional Density Distribution in Individual Cells Using Scanning Transmission Electron Microscopy, Atomic Force Microscopy, and a New Deconvolution Algorithm. Microscopy and Microanalysis : the Official Journal of Microscopy Society of America, Microbeam Analysis Society, Microscopical Society of Canada. 1-7. PMID 28416035 DOI: 10.1017/S1431927617000447  1
2017 Cherkezyan L, Zhang D, Subramanian H, Capoglu I, Taflove A, Backman V. Review of interferometric spectroscopy of scattered light for the quantification of subdiffractional structure of biomaterials. Journal of Biomedical Optics. 22: 30901. PMID 28290596 DOI: 10.1117/1.JBO.22.3.030901  1
2016 Almassalha LM, Bauer GM, Chandler JE, Gladstein S, Cherkezyan L, Stypula-Cyrus Y, Weinberg S, Zhang D, Thusgaard Ruhoff P, Roy HK, Subramanian H, Chandel NS, Szleifer I, Backman V. Label-free imaging of the native, living cellular nanoarchitecture using partial-wave spectroscopic microscopy. Proceedings of the National Academy of Sciences of the United States of America. PMID 27702891 DOI: 10.1073/pnas.1608198113  1
2016 Zhang D, Capoglu I, Li Y, Cherkezyan L, Chandler J, Spicer G, Subramanian H, Taflove A, Backman V. Finite-difference time-domain-based optical microscopy simulation of dispersive media facilitates the development of optical imaging techniques. Journal of Biomedical Optics. 21: 65004. PMID 27283256 DOI: 10.1117/1.JBO.21.6.065004  1
2016 Chandler JE, Cherkezyan L, Subramanian H, Backman V. Nanoscale refractive index fluctuations detected via sparse spectral microscopy. Biomedical Optics Express. 7: 883-93. PMID 27231596 DOI: 10.1364/BOE.7.000883  1
2016 Chandler JE, Stypula-Cyrus Y, Almassalha L, Bauer G, Bowen L, Subramanian H, Szleifer I, Backman V. Colocalization of cellular nanostructure using confocal fluorescence and partial wave spectroscopy. Journal of Biophotonics. PMID 27111884 DOI: 10.1002/jbio.201500298  1
2016 Miao Q, Derbas J, Eid A, Subramanian H, Backman V. Automated Cell Selection Using Support Vector Machine for Application to Spectral Nanocytology. Biomed Research International. 2016: 6090912. PMID 26904682 DOI: 10.1155/2016/6090912  1
2016 Cherkezyan L, Zhang D, Subramanian H, Taflove A, Backman V. Reconstruction of explicit structural properties at the nanoscale via spectroscopic microscopy. Journal of Biomedical Optics. 21: 25007. PMID 26886803 DOI: 10.1117/1.JBO.21.2.025007  1
2015 Zhang D, Cherkezyan L, Capoglu I, Subramanian H, Chandler J, Thompson S, Taflove A, Backman V. Spectroscopic microscopy can quantify the statistics of subdiffractional refractive-index fluctuations in media with random rough surfaces. Optics Letters. 40: 4931-4. PMID 26512486  1
2015 Jovanovic BD, Subramanian H, Helenowski IB, Roy HK, Backman V. Clinical Trial Laboratory Data Nested With in Subject: Components of Variance, Sample Size and Cost. Biometrics & Biostatistics International Journal. 2. PMID 26457336  1
2015 Roy HK, Brendler CB, Subramanian H, Zhang D, Maneval C, Chandler J, Bowen L, Kaul KL, Helfand BT, Wang CH, Quinn M, Petkewicz J, Paterakos M, Backman V. Nanocytological field carcinogenesis detection to mitigate overdiagnosis of prostate cancer: a proof of concept study. Plos One. 10: e0115999. PMID 25706755 DOI: 10.1371/journal.pone.0115999  1
2015 Zhang D, Capoglu I, Cherkezyan L, Subramanian H, Taflove A, Backman V. Subdiffraction-scale surface roughness impact upon spectroscopic microscopy detection of internal refractive index fluctuations: Applications to early-state cancer detection 2015 Usnc-Ursi Radio Science Meeting (Joint With Ap-S Symposium), Usnc-Ursi 2015 - Proceedings. 202. DOI: 10.1109/USNC-URSI.2015.7303486  1
2014 Cherkezyan L, Subramanian H, Backman V. What structural length scales can be detected by the spectral variance of a microscope image? Optics Letters. 39: 4290-3. PMID 25078159 DOI: 10.1364/OL.39.004290  1
2014 Cherkezyan L, Stypula-Cyrus Y, Subramanian H, White C, Dela Cruz M, Wali RK, Goldberg MJ, Bianchi LK, Roy HK, Backman V. Nanoscale changes in chromatin organization represent the initial steps of tumorigenesis: a transmission electron microscopy study. Bmc Cancer. 14: 189. PMID 24629088 DOI: 10.1186/1471-2407-14-189  1
2014 Damania D, Subramanian H, Backman V, Anderson EC, Wong MH, McCarty OJ, Phillips KG. Network signatures of nuclear and cytoplasmic density alterations in a model of pre and postmetastatic colorectal cancer. Journal of Biomedical Optics. 19: 16016. PMID 24441943 DOI: 10.1117/1.JBO.19.1.016016  1
2013 Chandler JE, Subramanian H, Maneval CD, White CA, Levenson RM, Backman V. High-speed spectral nanocytology for early cancer screening. Journal of Biomedical Optics. 18: 117002. PMID 24193949 DOI: 10.1117/1.JBO.18.11.117002  1
2013 Konda VJ, Cherkezyan L, Subramanian H, Wroblewski K, Damania D, Becker V, Gonzalez MH, Koons A, Goldberg M, Ferguson MK, Waxman I, Roy HK, Backman V. Nanoscale markers of esophageal field carcinogenesis: potential implications for esophageal cancer screening. Endoscopy. 45: 983-8. PMID 24019132 DOI: 10.1055/s-0033-1344617  1
2013 Roy HK, Damania DP, DelaCruz M, Kunte DP, Subramanian H, Crawford SE, Tiwari AK, Wali RK, Backman V. Nano-architectural alterations in mucus layer fecal colonocytes in field carcinogenesis: potential for screening. Cancer Prevention Research (Philadelphia, Pa.). 6: 1111-9. PMID 23983085 DOI: 10.1158/1940-6207.CAPR-13-0138  1
2013 Cherkezyan L, Capoglu I, Subramanian H, Rogers JD, Damania D, Taflove A, Backman V. Interferometric spectroscopy of scattered light can quantify the statistics of subdiffractional refractive-index fluctuations. Physical Review Letters. 111: 033903. PMID 23909326 DOI: 10.1103/PhysRevLett.111.033903  1
2013 Stypula-Cyrus Y, Damania D, Kunte DP, Cruz MD, Subramanian H, Roy HK, Backman V. HDAC up-regulation in early colon field carcinogenesis is involved in cell tumorigenicity through regulation of chromatin structure. Plos One. 8: e64600. PMID 23724067 DOI: 10.1371/journal.pone.0064600  1
2013 Agus DB, Alexander JF, Arap W, Ashili S, Aslan JE, Austin RH, Backman V, Bethel KJ, Bonneau R, Chen WC, Chen-Tanyolac C, Choi NC, Curley SA, Dallas M, ... ... Subramanian H, et al. A physical sciences network characterization of non-tumorigenic and metastatic cells. Scientific Reports. 3: 1449. PMID 23618955 DOI: 10.1038/srep01449  1
2013 Damania D, Roy HK, Kunte D, Hurteau JA, Subramanian H, Cherkezyan L, Krosnjar N, Shah M, Backman V. Insights into the field carcinogenesis of ovarian cancer based on the nanocytology of endocervical and endometrial epithelial cells. International Journal of Cancer. Journal International Du Cancer. 133: 1143-52. PMID 23436651 DOI: 10.1002/ijc.28122  1
2012 Cherkezyan L, Subramanian H, Stoyneva V, Rogers JD, Yang S, Damania D, Taflove A, Backman V. Targeted alteration of real and imaginary refractive index of biological cells by histological staining. Optics Letters. 37: 1601-3. PMID 22627509 DOI: 10.1364/OL.37.001601  1
2012 Damania D, Roy HK, Subramanian H, Weinberg DS, Rex DK, Goldberg MJ, Muldoon J, Cherkezyan L, Zhu Y, Bianchi LK, Shah D, Pradhan P, Borkar M, Lynch H, Backman V. Nanocytology of rectal colonocytes to assess risk of colon cancer based on field cancerization. Cancer Research. 72: 2720-7. PMID 22491589 DOI: 10.1158/0008-5472.CAN-11-3807  1
2011 Çapoğlu İR, White CA, Rogers JD, Subramanian H, Taflove A, Backman V. Numerical simulation of partially coherent broadband optical imaging using the finite-difference time-domain method. Optics Letters. 36: 1596-8. PMID 21540939 DOI: 10.1364/OL.36.001596  1
2011 Pradhan P, Damania D, Joshi HM, Turzhitsky V, Subramanian H, Roy HK, Taflove A, Dravid VP, Backman V. Quantification of nanoscale density fluctuations by electron microscopy: probing cellular alterations in early carcinogenesis. Physical Biology. 8: 026012. PMID 21441647 DOI: 10.1088/1478-3975/8/2/026012  1
2010 Pradhan P, Damania D, Joshi HM, Turzhitsky V, Subramanian H, Roy HK, Taflove A, Dravid VP, Backman V. Quantification of nanoscale density fluctuations using electron microscopy: Light-localization properties of biological cells. Applied Physics Letters. 97: 243704. PMID 21221251 DOI: 10.1063/1.3524523  1
2010 Roy HK, Subramanian H, Damania D, Hensing TA, Rom WN, Pass HI, Ray D, Rogers JD, Bogojevic A, Shah M, Kuzniar T, Pradhan P, Backman V. Optical detection of buccal epithelial nanoarchitectural alterations in patients harboring lung cancer: implications for screening. Cancer Research. 70: 7748-54. PMID 20924114 DOI: 10.1158/0008-5472.CAN-10-1686  1
2010 Damania D, Subramanian H, Tiwari AK, Stypula Y, Kunte D, Pradhan P, Roy HK, Backman V. Role of cytoskeleton in controlling the disorder strength of cellular nanoscale architecture. Biophysical Journal. 99: 989-96. PMID 20682278 DOI: 10.1016/j.bpj.2010.05.023  1
2009 Backman V, Subramanian H, Pradhan P, Liu Y, Capoglu I, Rogers JD, Roy HK, Taflove A. Detecting alterations in cell ultrastructure with optical imaging. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 6325-6. PMID 19964153 DOI: 10.1109/IEMBS.2009.5333173  1
2009 Subramanian H, Roy HK, Pradhan P, Goldberg MJ, Muldoon J, Brand RE, Sturgis C, Hensing T, Ray D, Bogojevic A, Mohammed J, Chang JS, Backman V. Nanoscale cellular changes in field carcinogenesis detected by partial wave spectroscopy. Cancer Research. 69: 5357-63. PMID 19549915 DOI: 10.1158/0008-5472.CAN-08-3895  1
2009 Subramanian H, Pradhan P, Liu Y, Capoglu IR, Rogers JD, Roy HK, Brand RE, Backman V. Partial-wave microscopic spectroscopy detects subwavelength refractive index fluctuations: an application to cancer diagnosis. Optics Letters. 34: 518-20. PMID 19373360 DOI: 10.1364/OL.34.000518  1
2009 Subramanian H, Pradhan P, Damania D, Balikov D, Maheshwari S, Backman V. Detecting nanoscale refractive index fluctuations using partial wave spectroscopic microscopy Optics Infobase Conference Papers 1
2008 Subramanian H, Pradhan P, Liu Y, Capoglu IR, Li X, Rogers JD, Heifetz A, Kunte D, Roy HK, Taflove A, Backman V. Optical methodology for detecting histologically unapparent nanoscale consequences of genetic alterations in biological cells. Proceedings of the National Academy of Sciences of the United States of America. 105: 20118-23. PMID 19073935 DOI: 10.1073/pnas.0804723105  1
2008 Subramanian H, Pradhan P, Kunte D, Deep N, Roy H, Backman V. Single-cell partial wave spectroscopic microscopy Biomedical Optics, Biomed 2008 1
2008 Backman V, Subramanian H, Pradhan P, Liu Y, Capoglu I, Rogers J. Detecting alterations in cell nanoarchitecture with optical imaging: Implications for cancer detection Optics Infobase Conference Papers 1
2007 Backman V, Kim Y, Liu Y, Turzhitsky V, Subramanian H, Pradhan P, Roy H, Goldberg M. Low-coherence enhanced backscattering and its applications. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2007: 521-3. PMID 18002007 DOI: 10.1109/IEMBS.2007.4352341  1
2007 Subramanian H, Pradhan P, Kim YL, Backman V. Penetration depth of low-coherence enhanced backscattered light in subdiffusion regime. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 041914. PMID 17500928 DOI: 10.1103/PhysRevE.75.041914  1
2007 Subramanian H, Pradhan P, Kim YL, Backman V. Penetration depth of low-coherence enhanced backscattering photons in the sub-diffusion regime Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6436. DOI: 10.1117/12.700974  1
2007 Subramanian H, Pradhan P, Backman V. Understanding cell nano-architecture and its alteration in carcinogenesis via partial-wave spectroscopy Optics Infobase Conference Papers 1
2006 Kim YL, Turzhitsky VM, Liu Y, Roy HK, Wali RK, Subramanian H, Pradhan P, Backman V. Low-coherence enhanced backscattering: review of principles and applications for colon cancer screening. Journal of Biomedical Optics. 11: 041125. PMID 16965153 DOI: 10.1117/1.2236292  1
2006 Subramanian H, Pradhan P, Kim YL, Liu Y, Li X, Backman V. Modeling low-coherence enhanced backscattering using Monte Carlo simulation. Applied Optics. 45: 6292-300. PMID 16892135 DOI: 10.1364/AO.45.006292  1
2006 Kim YL, Pradhan P, Subramanian H, Liu Y, Kim MH, Backman V. Origin of low-coherence enhanced backscattering. Optics Letters. 31: 1459-61. PMID 16642138 DOI: 10.1364/OL.31.001459  1
2006 Subramanian H, Pradhan P, Kim YL, Liu Y, Backman V. Modeling low-coherence enhanced backscattering (LEBS) using photon random walk model of light scattering Proceedings of Spie - the International Society For Optical Engineering. 6085. DOI: 10.1117/12.646868  1
2006 Pradhan P, Kim YL, Subramanian H, Backman V. Effects of the anisotropy factor of scattering and the finite spatial coherence length of light source on enhanced backscattering Progress in Biomedical Optics and Imaging - Proceedings of Spie. 6091.  1
2006 Subramanian H, Pradhan P, Kim YL, Liu Y, Backman V. Monte carlo model of low-coherence enhanced backscattering (LEBS) from anisotropic disordered media Optics Infobase Conference Papers 1
2006 Kim YL, Pradhan P, Subramanian H, Liu Y, Kim MH, Backman V. Minimal scattering events in enhanced backscattering (EBS) of light: Origin of low-coherence EBS in discrete tissue models Optics Infobase Conference Papers 1
2006 Kim YL, Pradhan P, Subramanian H, Liu Y, Kim MH, Backman V. Probing minimal scattering events in coherent backscattering of light using low-coherence induced dephasing Optics Infobase Conference Papers 1
2005 Subramanian H, Ibey BL, Xu W, Wilson MA, Ericson MN, Coté GL. Real-time separation of perfusion and oxygenation signals for an implantable sensor using adaptive filtering. Ieee Transactions On Bio-Medical Engineering. 52: 2016-23. PMID 16366225 DOI: 10.1109/TBME.2005.857667  1
2005 Subramanian H, Ibey BL, Xu W, Wilson MA, Ericson MN, Coté GL. An autocorrelation-based time domain analysis technique for monitoring perfusion and oxygenation in transplanted organs. Ieee Transactions On Bio-Medical Engineering. 52: 1355-8. PMID 16042002 DOI: 10.1109/TBME.2005.847552  1
2005 Ibey B, Subramanian H, Ericson N, Xu W, Wilson M, Cote GL. Processing of pulse oximeter signals using adaptive filtering and autocorrelation to isolate perfusion and oxygenation components Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5702: 54-60. DOI: 10.1117/12.585306  1
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