Antony K. Chen, Ph.D. - Publications

2008 University of Pennsylvania, Philadelphia, PA, United States 
Biomedical Engineering

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Mao S, Ying Y, Wu X, Krueger CJ, Chen AK. CRISPR/dual-FRET molecular beacon for sensitive live-cell imaging of non-repetitive genomic loci. Nucleic Acids Research. PMID 31504824 DOI: 10.1093/nar/gkz752  0.36
2019 Ying Y, Mao S, Krueger CJ, Chen AK. Live-Cell Imaging of Long Noncoding RNAs Using Molecular Beacons. Methods in Molecular Biology (Clifton, N.J.). 2038: 21-33. PMID 31407275 DOI: 10.1007/978-1-4939-9674-2_2  0.36
2019 Wu X, Mao S, Ying Y, Krueger CJ, Chen AK. Progress and Challenges for Live-cell Imaging of Genomic Loci Using CRISPR-based Platforms. Genomics, Proteomics & Bioinformatics. PMID 30710789 DOI: 10.1016/j.gpb.2018.10.001  0.36
2019 Chen M, Mao S, Wu X, Ma Z, Yang Y, Krueger CJ, Chen AK. Single-Molecule Analysis of RNA Dynamics in Living Cells Using Molecular Beacons. Methods in Molecular Biology (Clifton, N.J.). 1870: 23-39. PMID 30539544 DOI: 10.1007/978-1-4939-8808-2_2  0.36
2018 Yang Y, Qu N, Tan J, Rushdi MN, Krueger CJ, Chen AK. Roles of Gag-RNA interactions in HIV-1 virus assembly deciphered by single-molecule localization microscopy. Proceedings of the National Academy of Sciences of the United States of America. PMID 29891653 DOI: 10.1073/pnas.1805728115  0.36
2018 Wu X, Mao S, Yang Y, Rushdi MN, Krueger CJ, Chen AK. A CRISPR/molecular beacon hybrid system for live-cell genomic imaging. Nucleic Acids Research. PMID 29718399 DOI: 10.1093/nar/gky304  0.36
2018 Chen M, Yang Y, Krueger CJ, Chen AK. Optimizing Molecular Beacons for Intracellular Analysis of RNA. Methods in Molecular Biology (Clifton, N.J.). 1649: 243-257. PMID 29130202 DOI: 10.1007/978-1-4939-7213-5_16  0.36
2018 Yang Y, Chen M, Krueger CJ, Tsourkas A, Chen AK. Quantifying Gene Expression in Living Cells with Ratiometric Bimolecular Beacons. Methods in Molecular Biology (Clifton, N.J.). 1649: 231-242. PMID 29130201 DOI: 10.1007/978-1-4939-7213-5_15  0.92
2017 Ma Z, Wu X, Krueger CJ, Chen AK. Engineering Novel Molecular Beacon Constructs to Study Intracellular RNA Dynamics and Localization. Genomics, Proteomics & Bioinformatics. PMID 28942262 DOI: 10.1016/j.gpb.2017.04.004  0.36
2017 Qu N, Ma Z, Zhang M, Rushdi MN, Krueger CJ, Chen AK. Inhibition of retroviral Gag assembly by non-silencing miRNAs promotes autophagic viral degradation. Protein & Cell. PMID 28884441 DOI: 10.1007/s13238-017-0461-z  0.36
2017 Chen M, Ma Z, Wu X, Mao S, Yang Y, Tan J, Krueger CJ, Chen AK. A molecular beacon-based approach for live-cell imaging of RNA transcripts with minimal target engineering at the single-molecule level. Scientific Reports. 7: 1550. PMID 28484218 DOI: 10.1038/s41598-017-01740-1  0.36
2017 Yu X, Zhang Y, Li T, Ma Z, Jia H, Chen Q, Zhao Y, Zhai L, Zhong R, Li C, Zou X, Meng J, Chen AK, Puri PL, Chen M, et al. Long non-coding RNA Linc-RAM enhances myogenic differentiation by interacting with MyoD. Nature Communications. 8: 14016. PMID 28091529 DOI: 10.1038/ncomms14016  0.36
2016 Zhao D, Yang Y, Qu N, Chen M, Ma Z, Krueger CJ, Behlke MA, Chen AK. Single-molecule detection and tracking of RNA transcripts in living cells using phosphorothioate-optimized 2'-O-methyl RNA molecular beacons. Biomaterials. 100: 172-183. PMID 27261815 DOI: 10.1016/j.biomaterials.2016.05.022  0.92
2013 Chen AK, Delrio FW, Peterson AW, Chung KH, Bhadiraju K, Plant AL. Cell spreading and proliferation in response to the composition and mechanics of engineered fibrillar extracellular matrices. Biotechnology and Bioengineering. 110: 2731-41. PMID 23568715 DOI: 10.1002/bit.24921  0.92
2013 Chung KH, Chen AK, Anderton CR, Bhadriraju K, Plant AL, Bush BG, Cook RF, Delrio FW. Frictional properties of native and functionalized type i collagen thin films Applied Physics Letters. 103. DOI: 10.1063/1.4824685  0.92
2011 Chen AK, Rhee WJ, Bao G, Tsourkas A. Delivery of molecular beacons for live-cell imaging and analysis of RNA. Methods in Molecular Biology (Clifton, N.J.). 714: 159-74. PMID 21431740 DOI: 10.1007/978-1-61779-005-8_10  0.92
2011 Crayton SH, Chen AK, Cheng Z, Tsourkas A. Molecular imaging Comprehensive Biomaterials. 3: 305-328.  0.92
2010 Cheng Z, Chen AK, Lee HY, Tsourkas A. Examination of folate-targeted liposomes with encapsulated poly(2-propylacrylic acid) as a pH-responsive nanoplatform for cytosolic drug delivery. Small (Weinheim An Der Bergstrasse, Germany). 6: 1398-401. PMID 20564486 DOI: 10.1002/smll.201000347  0.92
2010 Chen AK, Davydenko O, Behlke MA, Tsourkas A. Ratiometric bimolecular beacons for the sensitive detection of RNA in single living cells. Nucleic Acids Research. 38: e148. PMID 20507905 DOI: 10.1093/nar/gkq436  0.92
2010 Chen AK, Tsourkas A. Developing novel molecular beacon constructs for improved live-cell analysis and imaging of RNA American Biotechnology Laboratory. 28: 10-13.  0.92
2009 Chen AK, Behlke MA, Tsourkas A. Sub-cellular trafficking and functionality of 2'-O-methyl and 2'-O-methyl-phosphorothioate molecular beacons. Nucleic Acids Research. 37: e149. PMID 19820111 DOI: 10.1093/nar/gkp837  0.92
2009 Chen AK, Tsourkas A. Imaging RNA in living cells with molecular beacons: Current perspectives and challenges Journal of Innovative Optical Health Sciences. 2: 315-324. DOI: 10.1142/S179354580900070X  0.92
2008 Elias DR, Thorek DL, Chen AK, Czupryna J, Tsourkas A. In vivo imaging of cancer biomarkers using activatable molecular probes. Cancer Biomarkers : Section a of Disease Markers. 4: 287-305. PMID 19126958  0.92
2008 Chen AK, Cheng Z, Behlke MA, Tsourkas A. Assessing the sensitivity of commercially available fluorophores to the intracellular environment. Analytical Chemistry. 80: 7437-44. PMID 18700780 DOI: 10.1021/ac8011347  0.92
2008 Chen AK, Behlke MA, Tsourkas A. Efficient cytosolic delivery of molecular beacon conjugates and flow cytometric analysis of target RNA. Nucleic Acids Research. 36: e69. PMID 18503086 DOI: 10.1093/nar/gkn331  0.92
2008 Thorek DLJ, Czupryna J, Chen AK, Tsourkas A. Molecular imaging of cancer with superparamagnetic iron-oxide nanoparticles Cancer Imaging. 85-95. DOI: 10.1016/B978-012374212-4.50079-1  0.92
2007 Chen AK, Behlke MA, Tsourkas A. Avoiding false-positive signals with nuclease-vulnerable molecular beacons in single living cells. Nucleic Acids Research. 35: e105. PMID 17702767 DOI: 10.1093/nar/gkm593  0.92
2007 Chen AK, Latz MI, Sobolewski P, Frangos JA. Evidence for the role of G-proteins in flow stimulation of dinoflagellate bioluminescence. American Journal of Physiology. Regulatory, Integrative and Comparative Physiology. 292: R2020-7. PMID 17322118 DOI: 10.1152/ajpregu.00649.2006  0.92
2006 Thorek DL, Chen AK, Czupryna J, Tsourkas A. Superparamagnetic iron oxide nanoparticle probes for molecular imaging. Annals of Biomedical Engineering. 34: 23-38. PMID 16496086 DOI: 10.1007/s10439-005-9002-7  0.92
2003 Chen AK, Latz MI, Frangos JA. The use of dinoflagellate bioluminescence to characterize cell stimulation in bioreactors. Biotechnology and Bioengineering. 83: 93-103. PMID 12740936 DOI: 10.1002/bit.10647  0.92
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