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Ronald Jackups, Ph.D. - Publications

Affiliations: 
2008 University of Illinois at Chicago, Chicago, IL, United States 
Area:
Bioinformatics Biology, Biostatistics Biology, Biochemistry
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11 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2012 Naveed H, Xu Y, Jackups R, Liang J. Predicting three-dimensional structures of transmembrane domains of β-barrel membrane proteins. Journal of the American Chemical Society. 134: 1775-81. PMID 22148174 DOI: 10.1021/Ja209895M  0.711
2011 Naveed H, Xu Y, Jackups R, Liang J. Intertwined Coil Inspired Modeling of β-Barrel Membrane Protein Structures using Predicted Interstrand Interaction Constraints Biophysical Journal. 100: 206a. DOI: 10.1016/J.Bpj.2010.12.1335  0.722
2010 Jackups R, Liang J. Combinatorial analysis for sequence and spatial motif discovery in short sequence fragments. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 7: 524-36. PMID 20671322 DOI: 10.1109/Tcbb.2008.101  0.493
2010 Naveed H, Jackups R, Liang J. Accurate Ab Initio Prediction of Three Dimensional Structures of Beta-Barrel Membrane Proteins from Sequences Biophysical Journal. 98: 644a. DOI: 10.1016/J.Bpj.2009.12.3529  0.717
2009 Naveed H, Jackups R, Liang J. Predicting weakly stable regions, oligomerization state, and protein-protein interfaces in transmembrane domains of outer membrane proteins. Proceedings of the National Academy of Sciences of the United States of America. 106: 12735-40. PMID 19622743 DOI: 10.1073/Pnas.0902169106  0.721
2009 Naveed H, Jackups R, Liang J. Predicting Strained Regions for Folding and Protein-Protein Interaction in Bacterial Outer Membranes Biophysical Journal. 96: 339a. DOI: 10.1016/J.Bpj.2008.12.3824  0.722
2006 Jackups R, Liang J. Combinatorial model for sequence and spatial motif discovery in short sequence fragments: examples from beta-barrel membrane proteins. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 3470-3. PMID 17947032 DOI: 10.1109/IEMBS.2006.259727  0.471
2006 Jackups R, Cheng S, Liang J. Sequence motifs and antimotifs in beta-barrel membrane proteins from a genome-wide analysis: the Ala-Tyr dichotomy and chaperone binding motifs. Journal of Molecular Biology. 363: 611-23. PMID 16973175 DOI: 10.1016/J.Jmb.2006.07.095  0.564
2005 Jackups R, Liang J. Interstrand pairing patterns in beta-barrel membrane proteins: the positive-outside rule, aromatic rescue, and strand registration prediction. Journal of Molecular Biology. 354: 979-93. PMID 16277990 DOI: 10.1016/J.Jmb.2005.09.094  0.572
2005 Liang J, Adamian L, Jackups R. The membrane-water interface region of membrane proteins: structural bias and the anti-snorkeling effect. Trends in Biochemical Sciences. 30: 355-7. PMID 15935679 DOI: 10.1016/J.Tibs.2005.05.003  0.561
2003 Adamian L, Jackups R, Binkowski TA, Liang J. Higher-order interhelical spatial interactions in membrane proteins. Journal of Molecular Biology. 327: 251-72. PMID 12614623 DOI: 10.1016/S0022-2836(03)00041-X  0.715
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