Amit Meller - Publications

Affiliations: 
Biomedical Engineering Boston University, Boston, MA, United States 
Area:
Biomedical Engineering, Nanotechnology

65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Wang R, Gilboa T, Song J, Huttner D, Grinstaff MW, Meller A. Single-Molecule Discrimination of Labeled DNAs and Polypeptides Using Background-Free TiO Nanopores. Acs Nano. PMID 30372037 DOI: 10.1021/acsnano.8b07055  0.48
2018 Gilboa T, Zrehen A, Girsault A, Meller A. Optically-Monitored Nanopore Fabrication Using a Focused Laser Beam. Scientific Reports. 8: 9765. PMID 29950607 DOI: 10.1038/s41598-018-28136-z  0.48
2017 Rudnizky S, Khamis H, Malik O, Squires AH, Meller A, Melamed P, Kaplan A. Single-molecule DNA unzipping reveals asymmetric modulation of a transcription factor by its binding site sequence and context. Nucleic Acids Research. PMID 29253225 DOI: 10.1093/nar/gkx1252  0.68
2017 Zrehen A, Gilboa T, Meller A. Real-time visualization and sub-diffraction limit localization of nanometer-scale pore formation by dielectric breakdown. Nanoscale. PMID 29058736 DOI: 10.1039/c7nr02629c  0.48
2016 Assad ON, Gilboa T, Spitzberg J, Juhasz M, Weinhold E, Meller A. Light-Enhancing Plasmonic-Nanopore Biosensor for Superior Single-Molecule Detection. Advanced Materials (Deerfield Beach, Fla.). PMID 28026129 DOI: 10.1002/adma.201605442  0.68
2016 Gilboa T, Torfstein C, Juhasz M, Grunwald A, Ebenstein Y, Weinhold E, Meller A. Single-Molecule DNA Methylation Quantification Using Electro-optical Sensing in Solid-State Nanopores. Acs Nano. PMID 27580095 DOI: 10.1021/acsnano.6b04748  0.48
2015 Squires AH, Atas E, Meller A. Genomic Pathogen Typing Using Solid-State Nanopores. Plos One. 10: e0142944. PMID 26562833 DOI: 10.1371/journal.pone.0142944  1
2015 Hersey JS, Meller A, Grinstaff MW. Functionalized Nanofiber Meshes Enhance Immunosorbent Assays. Analytical Chemistry. 87: 11863-70. PMID 26551162 DOI: 10.1021/acs.analchem.5b03386  1
2015 Squires A, Atas E, Meller A. Nanopore sensing of individual transcription factors bound to DNA. Scientific Reports. 5: 11643. PMID 26109509 DOI: 10.1038/srep11643  1
2015 Nir I, Huttner D, Meller A. Direct Sensing and Discrimination among Ubiquitin and Ubiquitin Chains Using Solid-State Nanopores. Biophysical Journal. 108: 2340-9. PMID 25954891 DOI: 10.1016/j.bpj.2015.03.025  1
2015 Gilboa T, Meller A. Optical sensing and analyte manipulation in solid-state nanopores. The Analyst. 140: 4733-47. PMID 25684652 DOI: 10.1039/c4an02388a  1
2015 Assad ON, Di Fiori N, Squires AH, Meller A. Two color DNA barcode detection in photoluminescence suppressed silicon nitride nanopores. Nano Letters. 15: 745-52. PMID 25522780 DOI: 10.1021/nl504459c  1
2015 Hersey JS, Squires AH, Meller A, Grinstaff MW. Orthogonally tunable solid-state nanopore modifications for improved biosensing 2015 41st Annual Northeast Biomedical Engineering Conference, Nebec 2015. DOI: 10.1109/NEBEC.2015.7117050  1
2014 Anderson BN, Assad ON, Gilboa T, Squires AH, Bar D, Meller A. Probing solid-state nanopores with light for the detection of unlabeled analytes. Acs Nano. 8: 11836-45. PMID 25363680 DOI: 10.1021/nn505545h  1
2014 Shemesh J, Ben Arye T, Avesar J, Kang JH, Fine A, Super M, Meller A, Ingber DE, Levenberg S. Stationary nanoliter droplet array with a substrate of choice for single adherent/nonadherent cell incubation and analysis. Proceedings of the National Academy of Sciences of the United States of America. 111: 11293-8. PMID 25053808 DOI: 10.1073/pnas.1404472111  1
2014 Sun Y, Atas E, Lindqvist LM, Sonenberg N, Pelletier J, Meller A. Single-molecule kinetics of the eukaryotic initiation factor 4AI upon RNA unwinding. Structure (London, England : 1993). 22: 941-8. PMID 24909782 DOI: 10.1016/j.str.2014.04.014  1
2013 Di Fiori N, Squires A, Bar D, Gilboa T, Moustakas TD, Meller A. Optoelectronic control of surface charge and translocation dynamics in solid-state nanopores. Nature Nanotechnology. 8: 946-51. PMID 24185943 DOI: 10.1038/nnano.2013.221  1
2013 Squires AH, Hersey JS, Grinstaff MW, Meller A. A nanopore-nanofiber mesh biosensor to control DNA translocation. Journal of the American Chemical Society. 135: 16304-7. PMID 24143914 DOI: 10.1021/ja408685x  1
2013 Squires A, Meller A. DNA capture and translocation through nanoscale pores-a fine balance of electrophoresis and electroosmosis. Biophysical Journal. 105: 543-4. PMID 23931300 DOI: 10.1016/j.bpj.2013.06.008  1
2013 Anderson BN, Muthukumar M, Meller A. pH tuning of DNA translocation time through organically functionalized nanopores. Acs Nano. 7: 1408-14. PMID 23259840 DOI: 10.1021/nn3051677  1
2013 Meller A. Nanopores: Single-molecule sensors of nucleic acid-based complexes Advances in Chemical Physics. 149: 251-268.  1
2012 Atas E, Singer A, Meller A. DNA sequencing and bar-coding using solid-state nanopores. Electrophoresis. 33: 3437-47. PMID 23109189 DOI: 10.1002/elps.201200266  1
2012 dela Torre R, Larkin J, Singer A, Meller A. Fabrication and characterization of solid-state nanopore arrays for high-throughput DNA sequencing. Nanotechnology. 23: 385308. PMID 22948520 DOI: 10.1088/0957-4484/23/38/385308  0.56
2012 Singer A, McNally B, Torre RD, Meller A. DNA sequencing by nanopore-induced photon emission. Methods in Molecular Biology (Clifton, N.J.). 870: 99-114. PMID 22528260 DOI: 10.1007/978-1-61779-773-6_6  1
2012 Sun Y, Atas E, Lindqvist L, Sonenberg N, Pelletier J, Meller A. The eukaryotic initiation factor eIF4H facilitates loop-binding, repetitive RNA unwinding by the eIF4A DEAD-box helicase. Nucleic Acids Research. 40: 6199-207. PMID 22457067 DOI: 10.1093/nar/gks278  1
2012 Lin J, Fabian M, Sonenberg N, Meller A. Nanopore detachment kinetics of poly(A) binding proteins from RNA molecules reveals the critical role of C-terminus interactions. Biophysical Journal. 102: 1427-34. PMID 22455926 DOI: 10.1016/j.bpj.2012.02.025  1
2012 Singer A, Rapireddy S, Ly DH, Meller A. Electronic barcoding of a viral gene at the single-molecule level. Nano Letters. 12: 1722-8. PMID 22352964 DOI: 10.1021/nl300372a  0.56
2011 Kim MC, Isenberg BC, Sutin J, Meller A, Wong JY, Klapperich CM. Programmed trapping of individual bacteria using micrometre-size sieves. Lab On a Chip. 11: 1089-95. PMID 21293825 DOI: 10.1039/c0lc00362j  1
2010 Singer A, Kuhn H, Frank-Kamenetskii M, Meller A. Detection of urea-induced internal denaturation of dsDNA using solid-state nanopores. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 22: 454111. PMID 21339599 DOI: 10.1088/0953-8984/22/45/454111  0.56
2010 Dudko OK, Mathé J, Meller A. Nanopore force spectroscopy tools for analyzing single biomolecular complexes. Methods in Enzymology. 475: 565-89. PMID 20627171 DOI: 10.1016/S0076-6879(10)75021-7  1
2010 Di Fiori N, Meller A. The Effect of dye-dye interactions on the spatial resolution of single-molecule FRET measurements in nucleic acids. Biophysical Journal. 98: 2265-72. PMID 20483335 DOI: 10.1016/j.bpj.2010.02.008  1
2010 Lin J, Kolomeisky A, Meller A. Helix-coil kinetics of individual polyadenylic acid molecules in a protein channel. Physical Review Letters. 104: 158101. PMID 20482020 DOI: 10.1103/PhysRevLett.104.158101  1
2010 Livingstone M, Atas E, Meller A, Sonenberg N. Mechanisms governing the control of mRNA translation. Physical Biology. 7: 021001. PMID 20463379 DOI: 10.1088/1478-3975/7/2/021001  1
2010 McNally B, Singer A, Yu Z, Sun Y, Weng Z, Meller A. Optical recognition of converted DNA nucleotides for single-molecule DNA sequencing using nanopore arrays. Nano Letters. 10: 2237-44. PMID 20459065 DOI: 10.1021/nl1012147  1
2010 Soni GV, Singer A, Yu Z, Sun Y, McNally B, Meller A. Synchronous optical and electrical detection of biomolecules traversing through solid-state nanopores. The Review of Scientific Instruments. 81: 014301. PMID 20113116 DOI: 10.1063/1.3277116  1
2010 Singer A, Wanunu M, Morrison W, Kuhn H, Frank-Kamenetskii M, Meller A. Nanopore based sequence specific detection of duplex DNA for genomic profiling. Nano Letters. 10: 738-42. PMID 20088590 DOI: 10.1021/nl100058y  0.6
2010 Wanunu M, Morrison W, Rabin Y, Grosberg AY, Meller A. Electrostatic focusing of unlabelled DNA into nanoscale pores using a salt gradient Nature Nanotechnology. 5: 160-165. PMID 20023645 DOI: 10.1038/nnano.2009.379  1
2009 Di Fiori N, Meller A. Automated system for single molecule fluorescence measurements of surface-immobilized biomolecules. Journal of Visualized Experiments : Jove. PMID 19884878 DOI: 10.3791/1542  1
2009 Valencia-Burton M, Shah A, Sutin J, Borogovac A, McCullough RM, Cantor CR, Meller A, Broude NE. Spatiotemporal patterns and transcription kinetics of induced RNA in single bacterial cells. Proceedings of the National Academy of Sciences of the United States of America. 106: 16399-404. PMID 19805311 DOI: 10.1073/pnas.0907495106  1
2009 Wanunu M, Sutin J, Meller A. DNA profiling using solid-state nanopores: detection of DNA-binding molecules. Nano Letters. 9: 3498-502. PMID 19585985 DOI: 10.1021/nl901691v  1
2009 Singer A, Meller A. Nanopore-based sensing of individual nucleic acid complexes Israel Journal of Chemistry. 49: 323-331. DOI: 10.1560/IJC.49.3-4.323  1
2008 Branton D, Deamer DW, Marziali A, Bayley H, Benner SA, Butler T, Di Ventra M, Garaj S, Hibbs A, Huang X, Jovanovich SB, Krstic PS, Lindsay S, Ling XS, Mastrangelo CH, ... Meller A, et al. The potential and challenges of nanopore sequencing. Nature Biotechnology. 26: 1146-53. PMID 18846088 DOI: 10.1038/nbt.1495  1
2008 McNally B, Wanunu M, Meller A. Electromechanical unzipping of individual DNA molecules using synthetic sub-2 nm pores. Nano Letters. 8: 3418-22. PMID 18759490 DOI: 10.1021/nl802218f  1
2008 Wanunu M, Sutin J, McNally B, Chow A, Meller A. DNA translocation governed by interactions with solid-state nanopores. Biophysical Journal. 95: 4716-25. PMID 18708467 DOI: 10.1529/biophysj.108.140475  1
2008 Wanunu M, Chakrabarti B, Mathé J, Nelson DR, Meller A. Orientation-dependent interactions of DNA with an alpha-hemolysin channel. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 77: 031904. PMID 18517419  0.6
2007 Soni GV, Meller A. Progress toward ultrafast DNA sequencing using solid-state nanopores. Clinical Chemistry. 53: 1996-2001. PMID 17890440 DOI: 10.1373/clinchem.2007.091231  1
2007 Wanunu M, Meller A. Chemically modified solid-state nanopores. Nano Letters. 7: 1580-5. PMID 17503868 DOI: 10.1021/nl070462b  1
2007 Edel JB, Eid JS, Meller A. Accurate single molecule FRET efficiency determination for surface immobilized DNA using maximum likelihood calculated lifetimes. The Journal of Physical Chemistry. B. 111: 2986-90. PMID 17388421 DOI: 10.1021/jp066530k  1
2007 Hornblower B, Coombs A, Whitaker RD, Kolomeisky A, Picone SJ, Meller A, Akeson M. Single-molecule analysis of DNA-protein complexes using nanopores. Nature Methods. 4: 315-7. PMID 17339846 DOI: 10.1038/nmeth1021  1
2007 Lee JW, Meller A. Chapter 8 Rapid DNA Sequencing by Direct Nanoscale Reading of Nucleotide Bases on Individual DNA chains Perspectives in Bioanalysis. 2: 245-263. DOI: 10.1016/S1871-0069(06)02008-8  1
2006 Bonthuis DJ, Zhang J, Hornblower B, Mathé J, Shklovskii BI, Meller A. Self-energy-limited ion transport in subnanometer channels Physical Review Letters. 97. PMID 17026003 DOI: 10.1103/PhysRevLett.97.128104  1
2006 Mathé J, Arinstein A, Rabin Y, Meller A. Equilibrium and irreversible unzipping of DNA in a nanopore Europhysics Letters. 73: 128-134. DOI: 10.1209/epl/i2005-10368-7  1
2006 Bell DC, Kim MJ, Wanunu M, Meller A. Nanoscale engineering with a TEM for DNA sequencing Microscopy and Microanalysis. 12: 638-639. DOI: 10.1017/S1431927606069157  1
2005 Sabanayagam CR, Eid JS, Meller A. Long time scale blinking kinetics of cyanine fluorophores conjugated to DNA and its effect on Förster resonance energy transfer. The Journal of Chemical Physics. 123: 224708. PMID 16375496 DOI: 10.1063/1.2136157  1
2005 Mathé J, Aksimentiev A, Nelson DR, Schulten K, Meller A. Orientation discrimination of single-stranded DNA inside the alpha-hemolysin membrane channel. Proceedings of the National Academy of Sciences of the United States of America. 102: 12377-82. PMID 16113083 DOI: 10.1073/pnas.0502947102  1
2005 Sabanayagam CR, Eid JS, Meller A. Using fluorescence resonance energy transfer to measure distances along individual DNA molecules: corrections due to nonideal transfer. The Journal of Chemical Physics. 122: 061103. PMID 15740360 DOI: 10.1063/1.1854120  1
2004 Sabanayagam CR, Eid JS, Meller A. High-throughput scanning confocal microscope for single molecule analysis Applied Physics Letters. 84: 1216-1218. DOI: 10.1063/1.1646725  1
2003 Bates M, Burns M, Meller A. Dynamics of DNA molecules in a membrane channel probed by active control techniques. Biophysical Journal. 84: 2366-72. PMID 12668445 DOI: 10.1016/S0006-3495(03)75042-5  1
2003 Meller A. Dynamics of polynucleotide transport through nanometre-scale pores Journal of Physics Condensed Matter. 15. DOI: 10.1088/0953-8984/15/17/202  1
2002 Meller A, Branton D. Single molecule measurements of DNA transport through a nanopore. Electrophoresis. 23: 2583-91. PMID 12210161 DOI: 10.1002/1522-2683(200208)23:16<2583::AID-ELPS2583>3.0.CO;2-H  1
2001 Meller A, Nivon L, Branton D. Voltage-driven DNA translocations through a nanopore. Physical Review Letters. 86: 3435-8. PMID 11327989 DOI: 10.1103/PhysRevLett.86.3435  1
1998 Tlusty T, Meller A, Bar-Ziv R. Optical gradient forces of strongly localized fields Physical Review Letters. 81: 1738-1741.  1
1996 Meller A, Stavans J. Stability of emulsions with nonadsorbing polymers Langmuir. 12: 301-304.  1
1995 Steiner U, Meller A, Stavans J. Entropy driven phase separation in binary emulsions. Physical Review Letters. 74: 4750-4753. PMID 10058589 DOI: 10.1103/PhysRevLett.74.4750  1
1992 Meller A, Stavans J. Glass transition and phase diagrams of strongly interacting binary colloidal mixtures. Physical Review Letters. 68: 3646-3649. PMID 10045757 DOI: 10.1103/PhysRevLett.68.3646  1
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