Ed Reznik, Ph.D. - Publications

Affiliations: 
2013 Biomedical Engineering Boston University, Boston, MA, United States 
Area:
Biomedical Engineering, Applied Mathematics

28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Armenia J, Wankowicz SAM, Liu D, Gao J, Kundra R, Reznik E, Chatila WK, Chakravarty D, Han GC, Coleman I, Montgomery B, Pritchard C, Morrissey C, Barbieri CE, Beltran H, et al. Publisher Correction: The long tail of oncogenic drivers in prostate cancer. Nature Genetics. PMID 31152158 DOI: 10.1038/s41588-019-0451-6  0.4
2019 Xu J, Reznik E, Lee HJ, Gundem G, Jonsson P, Sarungbam J, Bialik A, Sanchez-Vega F, Creighton CJ, Hoekstra JG, Zhang L, Sajjakulnukit P, Kremer D, Tolstyka ZP, Casuscelli J, et al. Abnormal oxidative metabolism in a quiet genomic background underlies clear cell papillary renal cell carcinoma. Elife. 8. PMID 30924768 DOI: 10.7554/eLife.38986  0.48
2018 Wang Q, Armenia J, Zhang C, Penson AV, Reznik E, Zhang L, Minet T, Ochoa A, Gross BE, Iacobuzio-Donahue CA, Betel D, Taylor BS, Gao J, Schultz N. Unifying cancer and normal RNA sequencing data from different sources. Scientific Data. 5: 180061. PMID 29664468 DOI: 10.1038/sdata.2018.61  0.4
2018 Armenia J, Wankowicz SAM, Liu D, Gao J, Kundra R, Reznik E, Chatila WK, Chakravarty D, Han GC, Coleman I, Montgomery B, Pritchard C, Morrissey C, Barbieri CE, Beltran H, et al. The long tail of oncogenic drivers in prostate cancer. Nature Genetics. PMID 29610475 DOI: 10.1038/s41588-018-0078-z  0.4
2018 Reznik E, Luna A, Aksoy BA, Liu EM, La K, Ostrovnaya I, Creighton CJ, Hakimi AA, Sander C. A Landscape of Metabolic Variation across Tumor Types. Cell Systems. PMID 29396322 DOI: 10.1016/j.cels.2017.12.014  0.48
2017 Reznik E, Christodoulou D, Goldford JE, Briars E, Sauer U, Segrè D, Noor E. Genome-Scale Architecture of Small Molecule Regulatory Networks and the Fundamental Trade-Off between Regulation and Enzymatic Activity. Cell Reports. 20: 2666-2677. PMID 28903046 DOI: 10.1016/j.celrep.2017.08.066  0.76
2017 Farshidfar F, Zheng S, Gingras MC, Newton Y, Shih J, Robertson AG, Hinoue T, Hoadley KA, Gibb EA, Roszik J, Covington KR, Wu CC, Shinbrot E, Stransky N, Hegde A, ... ... Reznik E, et al. Integrative Genomic Analysis of Cholangiocarcinoma Identifies Distinct IDH-Mutant Molecular Profiles. Cell Reports. 19: 2878-2880. PMID 28658632 DOI: 10.1016/j.celrep.2017.06.008  0.48
2017 Farshidfar F, Zheng S, Gingras MC, Newton Y, Shih J, Robertson AG, Hinoue T, Hoadley KA, Gibb EA, Roszik J, Covington KR, Wu CC, Shinbrot E, Stransky N, Hegde A, ... ... Reznik E, et al. Integrative Genomic Analysis of Cholangiocarcinoma Identifies Distinct IDH-Mutant Molecular Profiles. Cell Reports. 18: 2780-2794. PMID 28297679 DOI: 10.1016/j.celrep.2017.02.033  0.48
2017 Barenholz U, Davidi D, Reznik E, Bar-On Y, Antonovsky N, Noor E, Milo R. Design principles of autocatalytic cycles constrain enzyme kinetics and force low substrate saturation at flux branch points. Elife. 6. PMID 28169831 DOI: 10.7554/eLife.20667  0.32
2017 Reznik E, Wang Q, La K, Schultz N, Sander C. Mitochondrial respiratory gene expression is suppressed in many cancers. Elife. 6. PMID 28099114 DOI: 10.7554/eLife.21592  0.48
2016 Zhao Q, Stettner AI, Reznik E, Paschalidis ICh, Segrè D. Mapping the landscape of metabolic goals of a cell. Genome Biology. 17: 109. PMID 27215445 DOI: 10.1186/s13059-016-0968-2  0.76
2016 Chen F, Zhang Y, Şenbabaoğlu Y, Ciriello G, Yang L, Reznik E, Shuch B, Micevic G, De Velasco G, Shinbrot E, Noble MS, Lu Y, Covington KR, Xi L, Drummond JA, et al. Multilevel Genomics-Based Taxonomy of Renal Cell Carcinoma. Cell Reports. PMID 26947078 DOI: 10.1016/j.celrep.2016.02.024  0.76
2016 Reznik E, Miller ML, Şenbabaoğlu Y, Riaz N, Sarungbam J, Tickoo SK, Al-Ahmadie HA, Lee W, Seshan VE, Hakimi AA, Sander C. Mitochondrial DNA copy number variation across human cancers. Elife. 5. PMID 26901439 DOI: 10.7554/eLife.10769  0.76
2016 Hakimi AA, Reznik E, Lee CH, Creighton CJ, Brannon AR, Luna A, Aksoy BA, Liu EM, Shen R, Lee W, Chen Y, Stirdivant SM, Russo P, Chen YB, Tickoo SK, et al. An Integrated Metabolic Atlas of Clear Cell Renal Cell Carcinoma. Cancer Cell. 29: 104-116. PMID 26766592 DOI: 10.1016/j.ccell.2015.12.004  0.76
2016 Zhao Q, Stettner A, Reznik E, Segre D, Paschalidis IC. Learning cellular objectives from fluxes by inverse optimization Proceedings of the Ieee Conference On Decision and Control. 2016: 1271-1276. DOI: 10.1109/CDC.2015.7402386  0.76
2015 Miller ML, Reznik E, Gauthier NP, Aksoy BA, Korkut A, Gao J, Ciriello G, Schultz N, Sander C. Pan-Cancer Analysis of Mutation Hotspots in Protein Domains. Cell Systems. 1: 197-209. PMID 27135912 DOI: 10.1016/j.cels.2015.08.014  0.48
2015 Gauthier NP, Reznik E, Gao J, Sumer SO, Schultz N, Sander C, Miller ML. MutationAligner: a resource of recurrent mutation hotspots in protein domains in cancer. Nucleic Acids Research. PMID 26590264 DOI: 10.1093/nar/gkv1132  0.76
2015 Sandhu R, Georgiou T, Reznik E, Zhu L, Kolesov I, Senbabaoglu Y, Tannenbaum A. Graph Curvature for Differentiating Cancer Networks. Scientific Reports. 5: 12323. PMID 26169480 DOI: 10.1038/srep12323  0.76
2015 Reznik E, Sander C. Extensive decoupling of metabolic genes in cancer. Plos Computational Biology. 11: e1004176. PMID 25961905 DOI: 10.1371/journal.pcbi.1004176  0.76
2015 Miller ML, Reznik E, Gauthier NP, Aksoy BA, Korkut A, Gao J, Ciriello G, Schultz N, Sander C. Pan-Cancer Analysis of Mutation Hotspots in Protein Domains Cell Systems. 1: 197-209. DOI: 10.1016/j.cels.2015.08.014  0.76
2014 Noor E, Bar-Even A, Flamholz A, Reznik E, Liebermeister W, Milo R. Pathway thermodynamics highlights kinetic obstacles in central metabolism. Plos Computational Biology. 10: e1003483. PMID 24586134 DOI: 10.1371/journal.pcbi.1003483  0.76
2013 Reznik E, Mehta P, Segrè D. Flux imbalance analysis and the sensitivity of cellular growth to changes in metabolite pools. Plos Computational Biology. 9: e1003195. PMID 24009492 DOI: 10.1371/journal.pcbi.1003195  0.76
2013 Reznik E, Chaudhary O, Segrè D. The average enzyme principle. Febs Letters. 587: 2891-4. PMID 23892076 DOI: 10.1016/j.febslet.2013.07.032  0.76
2013 Reznik E, Kaper TJ, Segrè D. The dynamics of hybrid metabolic-genetic oscillators. Chaos (Woodbury, N.Y.). 23: 013132. PMID 23556969 DOI: 10.1063/1.4793573  0.76
2013 Reznik E, Watson A, Chaudhary O. The stubborn roots of metabolic cycles. Journal of the Royal Society, Interface / the Royal Society. 10: 20130087. PMID 23554346 DOI: 10.1098/rsif.2013.0087  0.76
2013 Reznik E, Yohe S, Segrè D. Invariance and optimality in the regulation of an enzyme. Biology Direct. 8: 7. PMID 23522082 DOI: 10.1186/1745-6150-8-7  0.76
2012 Collins SB, Reznik E, Segrè D. Temporal expression-based analysis of metabolism. Plos Computational Biology. 8: e1002781. PMID 23209390 DOI: 10.1371/journal.pcbi.1002781  0.76
2010 Reznik E, Segrè D. On the stability of metabolic cycles. Journal of Theoretical Biology. 266: 536-49. PMID 20673772 DOI: 10.1016/j.jtbi.2010.07.023  0.76
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