J Stephen Lodmell - Publications

Affiliations: 
University of Montana, Missoula, MT 
Area:
Biochemistry, Microbiology Biology

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Bisom TC, Smelser H, Lanchy JM, Lodmell JS. Alternative Splicing of RIOK3 Engages the Noncanonical NFκB Pathway during Rift Valley Fever Virus Infection. Viruses. 15. PMID 37515252 DOI: 10.3390/v15071566  0.345
2021 Hayashi M, Schultz EP, Lanchy JM, Lodmell JS. Time-Resolved Analysis of N-RNA Interactions during RVFV Infection Shows Qualitative and Quantitative Shifts in RNA Encapsidation and Packaging. Viruses. 13. PMID 34960686 DOI: 10.3390/v13122417  0.539
2021 Havranek KE, White LA, Bisom TC, Lanchy JM, Lodmell JS. The Atypical Kinase RIOK3 Limits RVFV Propagation and Is Regulated by Alternative Splicing. Viruses. 13. PMID 33652597 DOI: 10.3390/v13030367  0.336
2019 Stamm S, Lodmell JS. C/D box snoRNAs in viral infections: RNA viruses use old dogs for new tricks. Non-Coding Rna Research. 4: 46-53. PMID 31193534 DOI: 10.1016/J.Ncrna.2019.02.001  0.578
2019 Havranek KE, White LA, Lanchy JM, Lodmell JS. Transcriptome profiling in Rift Valley fever virus infected cells reveals modified transcriptional and alternative splicing programs. Plos One. 14: e0217497. PMID 31136639 DOI: 10.1371/Journal.Pone.0217497  0.457
2016 Hornak KE, Lanchy JM, Lodmell JS. RNA Encapsidation and Packaging in the Phleboviruses. Viruses. 8. PMID 27428993 DOI: 10.3390/v8070194  0.545
2015 Ellenbecker M, St Goddard J, Sundet A, Lanchy JM, Raiford D, Lodmell JS. Computational prediction and biochemical characterization of novel RNA aptamers to Rift Valley fever virus nucleocapsid protein. Computational Biology and Chemistry. 58: 120-5. PMID 26141677 DOI: 10.1016/J.Compbiolchem.2015.06.005  0.79
2014 Ellenbecker M, Lanchy JM, Lodmell JS. Inhibition of Rift Valley fever virus replication and perturbation of nucleocapsid-RNA interactions by suramin. Antimicrobial Agents and Chemotherapy. 58: 7405-15. PMID 25267680 DOI: 10.1128/Aac.03595-14  0.786
2012 Ellenbecker M, Lanchy JM, Lodmell JS. Identification of Rift Valley fever virus nucleocapsid protein-RNA binding inhibitors using a high-throughput screening assay. Journal of Biomolecular Screening. 17: 1062-70. PMID 22644268 DOI: 10.1177/1087057112448100  0.767
2011 Strong CL, Lanchy JM, Lodmell JS. Viral SELEX reveals individual and cooperative roles of the C-box and G-box in HIV-2 replication. Rna (New York, N.Y.). 17: 1307-20. PMID 21613531 DOI: 10.1261/Rna.2564311  0.554
2009 Strong CL, Lanchy JM, Dieng-Sarr A, Kanki PJ, Lodmell JS. A 5'UTR-spliced mRNA isoform is specialized for enhanced HIV-2 gag translation. Journal of Molecular Biology. 391: 426-37. PMID 19559029 DOI: 10.1016/J.Jmb.2009.06.046  0.569
2009 Baig TT, Lanchy JM, Lodmell JS. Randomization and in vivo selection reveal a GGRG motif essential for packaging human immunodeficiency virus type 2 RNA. Journal of Virology. 83: 802-10. PMID 18971263 DOI: 10.1128/Jvi.01521-08  0.779
2008 Baig TT, Strong CL, Lodmell JS, Lanchy JM. Regulation of primate lentiviral RNA dimerization by structural entrapment. Retrovirology. 5: 65. PMID 18637186 DOI: 10.1186/1742-4690-5-65  0.788
2007 Baig TT, Lanchy JM, Lodmell JS. HIV-2 RNA dimerization is regulated by intramolecular interactions in vitro. Rna (New York, N.Y.). 13: 1341-54. PMID 17592043 DOI: 10.1261/Rna.483807  0.788
2007 Fabbretti A, Pon CL, Hennelly SP, Hill WE, Lodmell JS, Gualerzi CO. The real-time path of translation factor IF3 onto and off the ribosome. Molecular Cell. 25: 285-96. PMID 17244535 DOI: 10.1016/J.Molcel.2006.12.011  0.701
2007 Lanchy JM, Lodmell JS. An extended stem-loop 1 is necessary for human immunodeficiency virus type 2 replication and affects genomic RNA encapsidation. Journal of Virology. 81: 3285-92. PMID 17229705 DOI: 10.1128/Jvi.02025-06  0.608
2005 Hennelly SP, Antoun A, Ehrenberg M, Gualerzi CO, Knight W, Lodmell JS, Hill WE. A time-resolved investigation of ribosomal subunit association. Journal of Molecular Biology. 346: 1243-58. PMID 15713478 DOI: 10.1016/J.Jmb.2004.12.054  0.69
2005 Bowen WS, Van Dyke N, Murgola EJ, Lodmell JS, Hill WE. Interaction of thiostrepton and elongation factor-G with the ribosomal protein L11-binding domain. The Journal of Biological Chemistry. 280: 2934-43. PMID 15492007 DOI: 10.1074/Jbc.M407008200  0.408
2004 Lanchy JM, Szafran QN, Lodmell JS. Splicing affects presentation of RNA dimerization signals in HIV-2 in vitro. Nucleic Acids Research. 32: 4585-95. PMID 15333691 DOI: 10.1093/Nar/Gkh800  0.656
2003 Lanchy JM, Ivanovitch JD, Lodmell JS. A structural linkage between the dimerization and encapsidation signals in HIV-2 leader RNA. Rna (New York, N.Y.). 9: 1007-18. PMID 12869711 DOI: 10.1261/Rna.5590603  0.69
2003 Marzi S, Knight W, Brandi L, Caserta E, Soboleva N, Hill WE, Gualerzi CO, Lodmell JS. Ribosomal localization of translation initiation factor IF2. Rna (New York, N.Y.). 9: 958-69. PMID 12869707 DOI: 10.1261/Rna.2116303  0.373
2003 Deer EL, Douk B, Lanchy JM, Lodmell JS. Elucidation and characterization of oligonucleotide-accessible sites on HIV-2 leader region RNA. Antisense & Nucleic Acid Drug Development. 13: 45-55. PMID 12691535 DOI: 10.1089/108729003764097331  0.653
2003 Lanchy JM, Rentz CA, Ivanovitch JD, Lodmell JS. Elements located upstream and downstream of the major splice donor site influence the ability of HIV-2 leader RNA to dimerize in vitro. Biochemistry. 42: 2634-42. PMID 12614158 DOI: 10.1021/Bi0271190  0.657
2002 Lanchy JM, Lodmell JS. Alternate usage of two dimerization initiation sites in HIV-2 viral RNA in vitro. Journal of Molecular Biology. 319: 637-48. PMID 12054860 DOI: 10.1016/S0022-2836(02)00369-8  0.629
2001 Lodmell JS, Ehresmann C, Ehresmann B, Marquet R. Structure and dimerization of HIV-1 kissing loop aptamers. Journal of Molecular Biology. 311: 475-90. PMID 11493002 DOI: 10.1006/Jmbi.2001.4879  0.595
2001 Jossinet F, Lodmell JS, Ehresmann C, Ehresmann B, Marquet R. Identification of the in vitro HIV-2/SIV RNA dimerization site reveals striking differences with HIV-1. The Journal of Biological Chemistry. 276: 5598-604. PMID 11092889 DOI: 10.1074/Jbc.M008642200  0.6
2000 Lodmell JS, Ehresmann C, Ehresmann B, Marquet R. Convergence of natural and artificial evolution on an RNA loop-loop interaction: the HIV-1 dimerization initiation site. Rna (New York, N.Y.). 6: 1267-76. PMID 10999604 DOI: 10.1017/S1355838200000698  0.566
1999 Jossinet F, Paillart JC, Westhof E, Hermann T, Skripkin E, Lodmell JS, Ehresmann C, Ehresmann B, Marquet R. Dimerization of HIV-1 genomic RNA of subtypes A and B: RNA loop structure and magnesium binding. Rna (New York, N.Y.). 5: 1222-34. PMID 10496223 DOI: 10.1017/S1355838299990982  0.596
1998 Lodmell JS, Paillart JC, Mignot D, Ehresmann B, Ehresmann C, Marquet R. Oligonucleotide-mediated inhibition of genomic RNA dimerization of HIV-1 strains MAL and LAI: a comparative analysis. Antisense & Nucleic Acid Drug Development. 8: 517-29. PMID 9918116 DOI: 10.1089/Oli.1.1998.8.517  0.656
1997 Lodmell JS, Dahlberg AE. A conformational switch in Escherichia coli 16S ribosomal RNA during decoding of messenger RNA. Science (New York, N.Y.). 277: 1262-7. PMID 9271564 DOI: 10.1126/Science.277.5330.1262  0.56
1993 Lodmell JS, Tapprich WE, Hill WE. Evidence for a conformational change in the exit site of the Escherichia coli ribosome upon tRNA binding. Biochemistry. 32: 4067-72. PMID 8385994 DOI: 10.1021/Bi00066A030  0.447
1990 Marconi RT, Lodmell JS, Hill WE. Identification of a rRNA/chloramphenicol interaction site within the peptidyltransferase center of the 50 S subunit of the Escherichia coli ribosome. The Journal of Biological Chemistry. 265: 7894-9. PMID 1692317  0.33
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