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Mehmet A. Orman, Ph.D. - Publications

Affiliations: 
2011 Graduate School - New Brunswick Rutgers University, New Brunswick, New Brunswick, NJ, United States 
Area:
Biochemistry, Biomedical Engineering, Bioinformatics Biology
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25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Mohiuddin SG, Hoang T, Saba A, Karki P, Orman MA. Identifying Metabolic Inhibitors to Reduce Bacterial Persistence. Frontiers in Microbiology. 11: 472. PMID 32292393 DOI: 10.3389/Fmicb.2020.00472  0.313
2016 Rao R, Yang Q, Orman MA, Berthiaume F, Ierapetritou MG, Androulakis IP. Burn trauma disrupts circadian rhythms in rat liver. International Journal of Burns and Trauma. 6: 12-25. PMID 27335693  0.773
2016 Orman MA, Henry TC, DeCoste CJ, Brynildsen MP. Analyzing Persister Physiology with Fluorescence-Activated Cell Sorting. Methods in Molecular Biology (Clifton, N.J.). 1333: 83-100. PMID 26468102 DOI: 10.1007/978-1-4939-2854-5_8  0.339
2015 Rao R, Orman MA, Berthiaume F, Androulakis IP. Dynamics of hepatic gene expression and serum cytokine profiles in single and double-hit burn and sepsis animal models. Data in Brief. 3: 229-33. PMID 26217749 DOI: 10.1016/J.Dib.2015.02.018  0.73
2015 Mok WW, Orman MA, Brynildsen MP. Impacts of global transcriptional regulators on persister metabolism. Antimicrobial Agents and Chemotherapy. 59: 2713-9. PMID 25712354 DOI: 10.1128/Aac.04908-14  0.44
2015 Orman MA, Mok WW, Brynildsen MP. Aminoglycoside-enabled elucidation of bacterial persister metabolism. Current Protocols in Microbiology. 36: 17.9.1-17.9.14. PMID 25641098 DOI: 10.1002/9780471729259.Mc1709S36  0.409
2014 Nguyen TT, Mattick JS, Yang Q, Orman MA, Ierapetritou MG, Berthiaume F, Androulakis IP. Bioinformatics analysis of transcriptional regulation of circadian genes in rat liver. Bmc Bioinformatics. 15: 83. PMID 24666587 DOI: 10.1186/1471-2105-15-83  0.755
2014 Amato SM, Fazen CH, Henry TC, Mok WW, Orman MA, Sandvik EL, Volzing KG, Brynildsen MP. The role of metabolism in bacterial persistence. Frontiers in Microbiology. 5: 70. PMID 24624123 DOI: 10.3389/Fmicb.2014.00070  0.41
2013 Orman MA, Brynildsen MP. Establishment of a method to rapidly assay bacterial persister metabolism. Antimicrobial Agents and Chemotherapy. 57: 4398-409. PMID 23817376 DOI: 10.1128/Aac.00372-13  0.438
2013 Amato SM, Orman MA, Brynildsen MP. Metabolic control of persister formation in Escherichia coli. Molecular Cell. 50: 475-87. PMID 23665232 DOI: 10.1016/J.Molcel.2013.04.002  0.366
2013 Orman MA, Brynildsen MP. Dormancy is not necessary or sufficient for bacterial persistence. Antimicrobial Agents and Chemotherapy. 57: 3230-9. PMID 23629720 DOI: 10.1128/Aac.00243-13  0.39
2013 Orman MA, Ierapetritou MG, Androulakis IP, Berthiaume F. Effect of fasting on the metabolic response of liver to experimental burn injury. Plos One. 8: e54825. PMID 23393558 DOI: 10.1371/Journal.Pone.0054825  0.78
2013 Mattick JS, Yang Q, Orman MA, Ierapetritou MG, Berthiaume F, Gale SC, Androulakis IP. Impact of burn priming on immune and metabolic functions of whole Liver in a rat cecal ligation and puncture model. International Journal of Burns and Trauma. 3: 55-65. PMID 23386986  0.79
2012 Orman MA, Mattick J, Androulakis IP, Berthiaume F, Ierapetritou MG. Stoichiometry based steady-state hepatic flux analysis: computational and experimental aspects. Metabolites. 2: 268-91. PMID 24957379 DOI: 10.3390/Metabo2010268  0.786
2012 Mattick JS, Yang Q, Orman MA, Ierapetritou MG, Berthiaume F, Androulakis IP. Long-term gene expression profile dynamics following cecal ligation and puncture in the rat. The Journal of Surgical Research. 178: 431-42. PMID 22572618 DOI: 10.1016/J.Jss.2012.03.052  0.75
2012 Orman MA, Ierapetritou MG, Berthiaume F, Androulakis IP. Long-term dynamic profiling of inflammatory mediators in double-hit burn and sepsis animal models. Cytokine. 58: 307-15. PMID 22402033 DOI: 10.1016/J.Cyto.2012.01.017  0.755
2012 Yang Q, Mattick JS, Orman MA, Nguyen TT, Ierapetritou MG, Berthiaume F, Androulakis IP. Dynamics of hepatic gene expression profile in a rat cecal ligation and puncture model. The Journal of Surgical Research. 176: 583-600. PMID 22381171 DOI: 10.1016/J.Jss.2011.11.1031  0.771
2012 Yang Q, Orman MA, Berthiaume F, Ierapetritou MG, Androulakis IP. Dynamics of short-term gene expression profiling in liver following thermal injury. The Journal of Surgical Research. 176: 549-58. PMID 22099593 DOI: 10.1016/J.Jss.2011.09.052  0.785
2012 Orman MA, Androulakis IP, Berthiaume F, Ierapetritou MG. Metabolic network analysis of perfused livers under fed and fasted states: incorporating thermodynamic and futile-cycle-associated regulatory constraints. Journal of Theoretical Biology. 293: 101-10. PMID 22037644 DOI: 10.1016/J.Jtbi.2011.10.019  0.776
2011 Orman MA, Berthiaume F, Androulakis IP, Ierapetritou MG. Advanced stoichiometric analysis of metabolic networks of mammalian systems. Critical Reviews in Biomedical Engineering. 39: 511-34. PMID 22196224 DOI: 10.1615/Critrevbiomedeng.V39.I6.30  0.745
2011 Orman MA, Ierapetritou MG, Berthiaume F, Androulakis IP. The dynamics of the early inflammatory response in double-hit burn and sepsis animal models. Cytokine. 56: 494-502. PMID 21824784 DOI: 10.1016/J.Cyto.2011.07.001  0.731
2011 Orman MA, Ierapetritou MG, Androulakis IP, Berthiaume F. Metabolic response of perfused livers to various oxygenation conditions. Biotechnology and Bioengineering. 108: 2947-57. PMID 21755498 DOI: 10.1002/Bit.23261  0.751
2011 Orman MA, Nguyen TT, Ierapetritou MG, Berthiaume F, Androulakis IP. Comparison of the cytokine and chemokine dynamics of the early inflammatory response in models of burn injury and infection. Cytokine. 55: 362-71. PMID 21652218 DOI: 10.1016/J.Cyto.2011.05.010  0.757
2011 Orman MA, Berthiaume F, Androulakis IP, Ierapetritou MG. Pathway analysis of liver metabolism under stressed condition. Journal of Theoretical Biology. 272: 131-40. PMID 21163266 DOI: 10.1016/J.Jtbi.2010.11.042  0.773
2010 Orman MA, Arai K, Yarmush ML, Androulakis IP, Berthiaume F, Ierapetritou MG. Metabolic flux determination in perfused livers by mass balance analysis: effect of fasting. Biotechnology and Bioengineering. 107: 825-35. PMID 20661905 DOI: 10.1002/Bit.22878  0.78
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