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Nicholas J. Marra, Ph.D. - Publications

Affiliations: 
2013 PULSe (Life Sciences) Purdue University, West Lafayette, IN, United States 
Area:
Genetics
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18 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Stanhope MJ, Ceres KM, Sun Q, Wang M, Zehr JD, Marra NJ, Wilder AP, Zou C, Bernard AM, Pavinski-Bitar P, Lokey MG, Shivji MS. Genomes of endangered great hammerhead and shortfin mako sharks reveal historic population declines and high levels of inbreeding in great hammerhead. Iscience. 26: 105815. PMID 36632067 DOI: 10.1016/j.isci.2022.105815  0.377
2022 Harder AM, Walden KKO, Marra NJ, Willoughby JR. High-quality reference genome for an arid-adapted mammal, the banner-tailed kangaroo rat (Dipodomys spectabilis). Genome Biology and Evolution. PMID 35026029 DOI: 10.1093/gbe/evac005  0.394
2019 Gorman J, Marra N, Shivji MS, Stanhope MJ. The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, . Mitochondrial Dna. Part B, Resources. 4: 3642-3643. PMID 33366122 DOI: 10.1080/23802359.2019.1677524  0.442
2019 Marra NJ, Stanhope MJ, Jue NK, Wang M, Sun Q, Pavinski Bitar P, Richards VP, Komissarov A, Rayko M, Kliver S, Stanhope BJ, Winkler C, O'Brien SJ, Antunes A, Jorgensen S, et al. White shark genome reveals ancient elasmobranch adaptations associated with wound healing and the maintenance of genome stability. Proceedings of the National Academy of Sciences of the United States of America. PMID 30782839 DOI: 10.1073/Pnas.1819778116  0.475
2019 Gorman J, Marra N, Shivji MS, Stanhope MJ. The complete mitochondrial genome of an Atlantic Ocean Shortfin Mako Shark, Isurus oxyrinchus Mitochondrial Dna Part B. 4: 3642-3643. DOI: 10.1080/23802359.2019.1677524  0.445
2017 Ruck CL, Marra N, Shivji MS, Stanhope MJ. The complete mitochondrial genome of the endangered great hammerhead shark, . Mitochondrial Dna. Part B, Resources. 2: 246-248. PMID 33473787 DOI: 10.1080/23802359.2017.1318682  0.489
2017 Marra NJ, Richards VP, Early A, Bogdanowicz SM, Pavinski Bitar PD, Stanhope MJ, Shivji MS. Comparative transcriptomics of elasmobranchs and teleosts highlight important processes in adaptive immunity and regional endothermy. Bmc Genomics. 18: 87. PMID 28132643 DOI: 10.1186/S12864-016-3411-X  0.413
2017 Ruck CL, Marra N, Shivji MS, Stanhope MJ. The complete mitochondrial genome of the endangered great hammerhead shark, Sphyrna mokarran Mitochondrial Dna Part B. 2: 246-248. DOI: 10.1080/23802359.2017.1318682  0.514
2016 Marra NJ, Wang M, Sun Q, Pavinski Bitar PD, Stanhope MJ, Shivji MS. Mitochondrial genome of an Atlantic white shark (). Mitochondrial Dna. Part B, Resources. 1: 717-719. PMID 33473604 DOI: 10.1080/23802359.2016.1222248  0.421
2016 Lutz HL, Marra NJ, Grewe F, Carlson JS, Palinauskas V, Valkiūnas G, Stanhope MJ. Laser capture microdissection microscopy and genome sequencing of the avian malaria parasite, Plasmodium relictum. Parasitology Research. PMID 27651044 DOI: 10.1007/S00436-016-5237-5  0.369
2016 Marra NJ, Wang M, Sun Q, Pavinski Bitar PD, Stanhope MJ, Shivji MS. Mitochondrial genome of an Atlantic white shark (Carcharodon carcharias) Mitochondrial Dna Part B. 1: 717-719. DOI: 10.1080/23802359.2016.1222248  0.406
2015 Ji Y, Marra NJ, DeWoody JA. Comparative analysis of active retrotransposons in the transcriptomes of three species of heteromyid rodents. Gene. 562: 95-106. PMID 25704534 DOI: 10.1016/J.Gene.2015.02.058  0.472
2015 Willoughby JR, Sundaram M, Wijayawardena BK, Kimble SJA, Ji Y, Fernandez NB, Antonides JD, Lamb MC, Marra NJ, DeWoody JA. The reduction of genetic diversity in threatened vertebrates and new recommendations regarding IUCN conservation rankings Biological Conservation. 191: 495-503. DOI: 10.1016/J.Biocon.2015.07.025  0.382
2014 Marra NJ, DeWoody JA. Transcriptomic characterization of the immunogenetic repertoires of heteromyid rodents. Bmc Genomics. 15: 929. PMID 25341737 DOI: 10.1186/1471-2164-15-929  0.495
2014 Marra NJ, Romero A, DeWoody JA. Natural selection and the genetic basis of osmoregulation in heteromyid rodents as revealed by RNA-seq. Molecular Ecology. 23: 2699-711. PMID 24754676 DOI: 10.1111/Mec.12764  0.517
2013 Doyle JM, Siegmund G, Ruhl JD, Eo SH, Hale MC, Marra NJ, Waser PM, Dewoody JA. Microsatellite analyses across three diverse vertebrate transcriptomes (Acipenser fulvescens, Ambystoma tigrinum, and Dipodomys spectabilis). Genome / National Research Council Canada = Gã©Nome / Conseil National De Recherches Canada. 56: 407-14. PMID 24099393 DOI: 10.1139/Gen-2013-0056  0.497
2012 Marra NJ, Eo SH, Hale MC, Waser PM, DeWoody JA. A priori and a posteriori approaches for finding genes of evolutionary interest in non-model species: osmoregulatory genes in the kidney transcriptome of the desert rodent Dipodomys spectabilis (banner-tailed kangaroo rat). Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 7: 328-39. PMID 22841684 DOI: 10.1016/J.Cbd.2012.07.001  0.443
2012 Eo SH, Doyle JM, Hale MC, Marra NJ, Ruhl JD, DeWoody JA. Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed by pyrosequencing. Gene. 492: 329-38. PMID 22138480 DOI: 10.1016/J.Gene.2011.11.018  0.391
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