David L. Weaver, Ph.D. - Publications

Affiliations: 
Physics and Astronomy Tufts University, Boston 

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2004 Islam SA, Karplus M, Weaver DL. The role of sequence and structure in protein folding kinetics; the diffusion-collision model applied to proteins L and G. Structure (London, England : 1993). 12: 1833-45. PMID 15458632 DOI: 10.1016/J.Str.2004.06.024  0.625
2004 Vasilkoski Z, Weaver DL. Diffusion-collision model algorithms for protein folding kinetics. Journal of Computational Chemistry. 25: 1101-7. PMID 15067685 DOI: 10.1002/Jcc.20032  0.662
2002 Islam SA, Karplus M, Weaver DL. Application of the diffusion-collision model to the folding of three-helix bundle proteins. Journal of Molecular Biology. 318: 199-215. PMID 12054779 DOI: 10.1016/S0022-2836(02)00029-3  0.664
2002 Jun B, Weaver DL. One-dimensional potential barrier model of protein folding with intermediates The Journal of Chemical Physics. 116: 418. DOI: 10.1063/1.1425819  0.726
2001 Beck C, Siemens X, Weaver DL. Diffusion-collision model study of misfolding in a four-helix bundle protein Biophysical Journal. 81: 3105-3115. PMID 11720978 DOI: 10.1016/S0006-3495(01)75948-6  0.55
2000 Jun B, Weaver DL. Diffusion-controlled kinetics of the helix–coil transition with square barrier hydrogen bonds The Journal of Chemical Physics. 112: 4394-4401. DOI: 10.1063/1.480985  0.691
2000 Vasilkoski Z, Weaver DL. A generator of protein folding kinetics states for the diffusion-collision model Journal of Computational Chemistry. 21: 923-932. DOI: 10.1002/1096-987X(200008)21:11<923::Aid-Jcc2>3.0.Co;2-J  0.472
1998 Pappu RV, Weaver DL. The early folding kinetics of apomyoglobin Protein Science. 7: 480-490. PMID 9521125 DOI: 10.1002/Pro.5560070229  0.616
1996 Yapa KK, Weaver DL. Protein Folding Dynamics:  Application of the Diffusion-Collision Model to the Folding of a Four-Helix Bundle The Journal of Physical Chemistry. 100: 2498-2509. DOI: 10.1021/Jp952543E  0.533
1996 Pappu RV, Schneller WJ, Weaver DL. Electrostatic multipole representation of a polypeptide chain: An algorithm for simulation of polypeptide properties Journal of Computational Chemistry. 17: 1033-1055. DOI: 10.1002/(Sici)1096-987X(199606)17:8<1033::Aid-Jcc12>3.0.Co;2-F  0.539
1994 Karplus M, Weaver DL. Protein folding dynamics: the diffusion-collision model and experimental data. Protein Science : a Publication of the Protein Society. 3: 650-68. PMID 8003983 DOI: 10.1002/Pro.5560030413  0.627
1993 Schneller W, Weaver DL. Simulation of alpha-helix-coil transitions in simplified polyvaline: equilibrium properties and Brownian dynamics. Biopolymers. 33: 1519-35. PMID 8218921 DOI: 10.1002/Bip.360331004  0.454
1992 Yapa K, Weaver DL, Karplus M. Beta-sheet coil transitions in a simple polypeptide model. Proteins. 12: 237-65. PMID 1557351 DOI: 10.1002/Prot.340120304  0.534
1992 Weaver DL. Modeling microdomains: the surface area of globin helices. Proteins. 13: 327-35. PMID 1518802 DOI: 10.1002/Prot.340130405  0.429
1992 Weaver DL. Hydrophobic interaction between globin helices. Biopolymers. 32: 477-90. PMID 1515540 DOI: 10.1002/Bip.360320504  0.337
1992 Yapa KK, Weaver DL. Folding kinetics of designer proteins. Application of the diffusion-collision model to a de novo designed four-helix bundle. Biophysical Journal. 63: 296-9. PMID 1420873 DOI: 10.1016/S0006-3495(92)81593-X  0.526
1990 Bryant SH, Islam SA, Weaver DL. The surface area of monomeric proteins: significance of power law behavior. Proteins. 6: 418-23. PMID 2622911 DOI: 10.1002/Prot.340060408  0.372
1990 Islam SA, Weaver DL. Molecular interactions in protein crystals: solvent accessible surface and stability. Proteins. 8: 1-5. PMID 2217159 DOI: 10.1002/Prot.340080103  0.372
1988 Bashford D, Cohen FE, Karplus M, Kuntz ID, Weaver DL. Diffusion-collision model for the folding kinetics of myoglobin. Proteins. 4: 211-27. PMID 3237719 DOI: 10.1002/Prot.340040308  0.627
1987 Lee SY, Karplus M, Bashford D, Weaver D. Brownian dynamics simulation of protein folding: a study of the diffusion-collision model. Biopolymers. 26: 481-506. PMID 3567323 DOI: 10.1002/Bip.360260404  0.639
1984 Weaver DL. Alternative pathways in diffusion-collision controlled protein folding. Biopolymers. 23: 675-94. PMID 6713076 DOI: 10.1002/Bip.360230408  0.552
1984 Bashford D, Weaver DL, Karplus M. Diffusion-collision model for the folding kinetics of the lambda-repressor operator-binding domain. Journal of Biomolecular Structure & Dynamics. 1: 1243-55. PMID 6400820 DOI: 10.1080/07391102.1984.10507515  0.564
1984 Bashford D, Weaver DL, Lee S, Karplus M. Dynamics of protein folding Acta Crystallographica Section a Foundations of Crystallography. 40: C21-C22. DOI: 10.1107/S0108767384099165  0.552
1982 Weaver DL. Microdomain dynamics in folding proteins Biopolymers. 21: 1275-1300. DOI: 10.1002/Bip.360210703  0.471
1980 Weaver D. Diffusion and the “fast-exchange” model Journal of Magnetic Resonance (1969). 37: 543-546. DOI: 10.1016/0022-2364(80)90059-1  0.352
1979 Karplus M, Weaver DL. Diffusion-collision model for protein folding Biopolymers. 18: 1421-1437. DOI: 10.1002/Bip.1979.360180608  0.633
1976 Karplus M, Weaver DL. Protein-folding dynamics. Nature. 260: 404-6. PMID 1256583 DOI: 10.1038/260404A0  0.585
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