Joseph M. Reinhardt - Publications

Affiliations: 
Biomedical Engineering University of Iowa, Iowa City, IA 

70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Gerard SE, Herrmann J, Kaczka DW, Musch G, Fernandez-Bustamante A, Reinhardt JM. Multi-resolution convolutional neural networks for fully automated segmentation of acutely injured lungs in multiple species. Medical Image Analysis. 60: 101592. PMID 31760194 DOI: 10.1016/j.media.2019.101592  0.44
2019 Lowe KE, Regan EA, Anzueto A, Austin E, Austin JHM, Beaty TH, Benos PV, Benway CJ, Bhatt SP, Bleecker ER, Bodduluri S, Bon J, Boriek AM, Boueiz AR, Bowler RP, ... ... Reinhardt JM, et al. COPDGene 2019: Redefining the Diagnosis of Chronic Obstructive Pulmonary Disease. Chronic Obstructive Pulmonary Diseases (Miami, Fla.). 6: 384-399. PMID 31710793 DOI: 10.15326/jcopdf.6.5.2019.0149  0.72
2019 Niu J, Cai M, Shi Y, Ren S, Xu W, Gao W, Luo Z, Reinhardt JM. A Novel Method for Automatic Identification of Breathing State. Scientific Reports. 9: 103. PMID 30643176 DOI: 10.1038/s41598-018-36454-5  0.6
2018 Kipritidis J, Tahir BA, Cazoulat G, Hofman MS, Siva S, Callahan J, Hardcastle N, Yamamoto T, Christensen GE, Reinhardt JM, Kadoya N, Patton TJ, Gerard SE, Duarte I, Archibald-Heeren B, et al. The VAMPIRE Challenge: A Multi-Institutional Validation Study of CT Ventilation Imaging. Medical Physics. PMID 30575051 DOI: 10.1002/mp.13346  0.72
2018 Bodduluri S, Puliyakote ASK, Gerard SE, Reinhardt JM, Hoffman EA, Newell JD, Nath HP, Han MK, Washko GR, San José Estépar R, Dransfield MT, Bhatt SP, Investigators C. Airway fractal dimension predicts respiratory morbidity and mortality in COPD. The Journal of Clinical Investigation. 128: 5676. PMID 30507605 DOI: 10.1172/JCI125987  0.72
2018 Bodduluri S, Kizhakke Puliyakote AS, Gerard SE, Reinhardt JM, Hoffman EA, Newell JD, Nath HP, Han MK, Washko GR, San José Estépar R, Dransfield MT, Bhatt SP. Airway Fractal Dimension Predicts Respiratory Morbidity and Mortality in COPD. The Journal of Clinical Investigation. PMID 30256767 DOI: 10.1172/JCI120693  0.72
2018 Gerard SE, Patton TJ, Christensen GE, Bayouth JE, Reinhardt JM. FissureNet: A Deep Learning Approach For Pulmonary Fissure Detection in CT Images. Ieee Transactions On Medical Imaging. PMID 30106711 DOI: 10.1109/TMI.2018.2858202  0.72
2018 Patton TJ, Gerard SE, Shao W, Christensen GE, Reinhardt JM, Bayouth JE. Quantifying ventilation change due to radiation therapy using 4DCT Jacobian calculations. Medical Physics. PMID 30047588 DOI: 10.1002/mp.13105  0.72
2017 Bodduluri S, Reinhardt JM, Hoffman EA, Newell JD, Bhatt SP. Recent Advances in CT Imaging in Chronic Obstructive Pulmonary Disease. Annals of the American Thoracic Society. PMID 28812906 DOI: 10.1513/AnnalsATS.201705-377FR  0.72
2017 Bodduluri S, Reinhardt JM, Hoffman EA, Newell JD, Nath H, Dransfield MT, Bhatt SP. Signs of Gas Trapping in Normal Lung Density Regions in Smokers. American Journal of Respiratory and Critical Care Medicine. PMID 28707983 DOI: 10.1164/rccm.201705-0855OC  0.72
2017 Bhatt SP, Bodduluri S, Hoffman EA, Newell JD, Sieren JC, Dransfield MT, Reinhardt JM. CT Measure of Lung At-risk and Lung Function Decline in Chronic Obstructive Pulmonary Disease. American Journal of Respiratory and Critical Care Medicine. PMID 28481639 DOI: 10.1164/rccm.201701-0050OC  0.72
2017 Bodduluri S, Bhatt SP, Hoffman EA, Newell JD, Martinez CH, Dransfield MT, Han MK, Reinhardt JM. Biomechanical CT metrics are associated with patient outcomes in COPD. Thorax. PMID 28044005 DOI: 10.1136/thoraxjnl-2016-209544  0.72
2016 Bodduluri S, Bhatt SP, Reinhardt JM. Computed Tomography Image Matching in Chronic Obstructive Pulmonary Disease. Critical Reviews in Biomedical Engineering. 44: 411-425. PMID 29431089 DOI: 10.1615/CritRevBiomedEng.2017021299  0.4
2016 Zhang GG, Latifi K, Du K, Reinhardt JM, Christensen GE, Ding K, Feygelman V, Moros EG. Evaluation of the ΔV 4D CT ventilation calculation method using in vivo xenon CT ventilation data and comparison to other methods. Journal of Applied Clinical Medical Physics. 17: 550-560. PMID 28297411 DOI: 10.1120/jacmp.v17i2.5985  0.72
2016 Zhang GG, Latifi K, Du K, Reinhardt JM, Christensen GE, Ding K, Feygelman V, Moros EG. Evaluation of the ΔV 4D CT ventilation calculation method using in vivo xenon CT ventilation data and comparison to other methods. Journal of Applied Clinical Medical Physics / American College of Medical Physics. 17: 5985. PMID 27074479  0.52
2016 Bhatt SP, Bodduluri S, Newell JD, Hoffman EA, Sieren JC, Han MK, Dransfield MT, Reinhardt JM. CT-derived Biomechanical Metrics Improve Agreement Between Spirometry and Emphysema. Academic Radiology. PMID 27055745 DOI: 10.1016/j.acra.2016.02.002  0.72
2014 Sommerfeld Ross S, Tu MH, Falsetta ML, Ketterer MR, Kiedrowski MR, Horswill AR, Apicella MA, Reinhardt JM, Fiegel J. Quantification of confocal images of biofilms grown on irregular surfaces. Journal of Microbiological Methods. 100: 111-20. PMID 24632515 DOI: 10.1016/j.mimet.2014.02.020  0.72
2014 Joshi VS, Reinhardt JM, Garvin MK, Abramoff MD. Automated method for identification and artery-venous classification of vessel trees in retinal vessel networks. Plos One. 9: e88061. PMID 24533066 DOI: 10.1371/journal.pone.0088061  0.72
2014 Amendola RL, Reinhardt JM, Zimmerman MB, Sato Y, Diggelmann HR, Kacmarynski DS. Development of a preliminary pediatric tracheal growth model from magnetic resonance images. The Laryngoscope. 124: 1947-51. PMID 24307560 DOI: 10.1002/lary.24547  0.4
2014 Amelon RE, Cao K, Reinhardt JM, Christensen GE, Raghavan ML. A measure for characterizing sliding on lung boundaries. Annals of Biomedical Engineering. 42: 642-50. PMID 24114112 DOI: 10.1007/s10439-013-0920-5  0.72
2013 Du K, Bayouth JE, Ding K, Christensen GE, Cao K, Reinhardt JM. Reproducibility of intensity-based estimates of lung ventilation. Medical Physics. 40. PMID 28518720 DOI: 10.1118/1.4805106  0.72
2013 Du K, Reinhardt JM, Christensen GE, Ding K, Bayouth JE. Respiratory effort correction strategies to improve the reproducibility of lung expansion measurements. Medical Physics. 40: 123504. PMID 24320544 DOI: 10.1118/1.4829519  0.72
2013 Adam RJ, Michalski AS, Bauer C, Abou Alaiwa MH, Gross TJ, Awadalla MS, Bouzek DC, Gansemer ND, Taft PJ, Hoegger MJ, Diwakar A, Ochs M, Reinhardt JM, Hoffman EA, Beichel RR, et al. Air trapping and airflow obstruction in newborn cystic fibrosis piglets. American Journal of Respiratory and Critical Care Medicine. 188: 1434-41. PMID 24168209 DOI: 10.1164/rccm.201307-1268OC  0.72
2013 Du K, Bayouth JE, Ding K, Christensen GE, Cao K, Reinhardt JM. Reproducibility of intensity-based estimates of lung ventilation. Medical Physics. 40: 063504. PMID 23718615 DOI: 10.1118/1.4805106  0.72
2013 Bodduluri S, Newell JD, Hoffman EA, Reinhardt JM. Registration-based lung mechanical analysis of chronic obstructive pulmonary disease (COPD) using a supervised machine learning framework. Academic Radiology. 20: 527-36. PMID 23570934 DOI: 10.1016/j.acra.2013.01.019  0.72
2013 Tang L, Niemeijer M, Reinhardt JM, Garvin MK, Abràmoff MD. Splat feature classification with application to retinal hemorrhage detection in fundus images. Ieee Transactions On Medical Imaging. 32: 364-75. PMID 23193310 DOI: 10.1109/TMI.2012.2227119  0.72
2012 Kacmarynski DS, Amendola R, Reinhardt JM, Smith RJ. Flexible models for planning repair of complex tracheal anomalies. The Laryngoscope. 122: S77. PMID 23254611 DOI: 10.1002/lary.23802  0.4
2012 Cao K, Ding K, Reinhardt JM, Christensen GE. Improving Intensity-Based Lung CT Registration Accuracy Utilizing Vascular Information. International Journal of Biomedical Imaging. 2012: 285136. PMID 23251141 DOI: 10.1155/2012/285136  0.72
2012 Xu X, Reinhardt JM, Hu Q, Bakall B, Tlucek PS, Bertelsen G, Abràmoff MD. Retinal vessel width measurement at branchings using an improved electric field theory-based graph approach. Plos One. 7: e49668. PMID 23209588 DOI: 10.1371/journal.pone.0049668  0.56
2012 Cao K, Christensen GE, Ding K, Du K, Raghavan ML, Amelon RE, Baker KM, Hoffman EA, Reinhardt JM. Tracking regional tissue volume and function change in lung using image registration. International Journal of Biomedical Imaging. 2012: 956248. PMID 23118740 DOI: 10.1155/2012/956248  0.72
2012 Li B, Christensen GE, Hoffman EA, McLennan G, Reinhardt JM. Establishing a normative atlas of the human lung: computing the average transformation and atlas construction. Academic Radiology. 19: 1368-81. PMID 22951110 DOI: 10.1016/j.acra.2012.04.025  0.72
2012 Joshi VS, Maude RJ, Reinhardt JM, Tang L, Garvin MK, Abu Sayeed A, Ghose A, Hassan MU, Abràmoff MD. Automated detection of malarial retinopathy-associated retinal hemorrhages. Investigative Ophthalmology & Visual Science. 53: 6582-8. PMID 22915035 DOI: 10.1167/iovs.12-10191  0.72
2012 Ding K, Cao K, Fuld MK, Du K, Christensen GE, Hoffman EA, Reinhardt JM. Comparison of image registration based measures of regional lung ventilation from dynamic spiral CT with Xe-CT. Medical Physics. 39: 5084-98. PMID 22894434 DOI: 10.1118/1.4736808  0.72
2012 Lo P, van Ginneken B, Reinhardt JM, Yavarna T, de Jong PA, Irving B, Fetita C, Ortner M, Pinho R, Sijbers J, Feuerstein M, FabijaÅ„ska A, Bauer C, Beichel R, Mendoza CS, et al. Extraction of airways from CT (EXACT'09). Ieee Transactions On Medical Imaging. 31: 2093-107. PMID 22855226 DOI: 10.1109/TMI.2012.2209674  0.72
2012 Sommerfeld Ross S, Reinhardt JM, Fiegel J. Enhanced analysis of bacteria susceptibility in connected biofilms. Journal of Microbiological Methods. 90: 9-14. PMID 22542520 DOI: 10.1016/j.mimet.2012.04.008  0.72
2012 Du K, Bayouth JE, Cao K, Christensen GE, Ding K, Reinhardt JM. Reproducibility of registration-based measures of lung tissue expansion. Medical Physics. 39: 1595-608. PMID 22380392 DOI: 10.1118/1.3685589  0.72
2011 Amelon R, Cao K, Ding K, Christensen GE, Reinhardt JM, Raghavan ML. Three-dimensional characterization of regional lung deformation. Journal of Biomechanics. 44: 2489-95. PMID 21802086 DOI: 10.1016/j.jbiomech.2011.06.009  0.72
2011 Gabe LM, Baker KM, van Beek EJ, Hunninghake GW, Reinhardt JM, Hoffman EA. Effect of segmental bronchoalveolar lavage on quantitative computed tomography of the lung. Academic Radiology. 18: 876-84. PMID 21669353 DOI: 10.1016/j.acra.2011.03.006  0.72
2011 Murphy K, van Ginneken B, Reinhardt JM, Kabus S, Ding K, Deng X, Cao K, Du K, Christensen GE, Garcia V, Vercauteren T, Ayache N, Commowick O, Malandain G, Glocker B, et al. Evaluation of registration methods on thoracic CT: the EMPIRE10 challenge. Ieee Transactions On Medical Imaging. 30: 1901-20. PMID 21632295 DOI: 10.1109/TMI.2011.2158349  0.72
2011 Xu X, Niemeijer M, Song Q, Sonka M, Garvin MK, Reinhardt JM, Abràmoff MD. Vessel boundary delineation on fundus images using graph-based approach. Ieee Transactions On Medical Imaging. 30: 1184-91. PMID 21216707 DOI: 10.1109/TMI.2010.2103566  0.72
2011 Yin Y, Hoffman EA, Ding K, Reinhardt JM, Lin CL. A cubic B-spline-based hybrid registration of lung CT images for a dynamic airway geometric model with large deformation. Physics in Medicine and Biology. 56: 203-18. PMID 21149947 DOI: 10.1088/0031-9155/56/1/013  0.72
2010 Thiesse J, Namati E, Sieren JC, Smith AR, Reinhardt JM, Hoffman EA, McLennan G. Lung structure phenotype variation in inbred mouse strains revealed through in vivo micro-CT imaging. Journal of Applied Physiology (Bethesda, Md. : 1985). 109: 1960-8. PMID 20671036 DOI: 10.1152/japplphysiol.01322.2009  0.72
2010 Tang L, Scheetz TE, Mackey DA, Hewitt AW, Fingert JH, Kwon YH, Quellec G, Reinhardt JM, Abràmoff MD. Automated quantification of inherited phenotypes from color images: a twin study of the variability of optic nerve head shape. Investigative Ophthalmology & Visual Science. 51: 5870-7. PMID 20505201 DOI: 10.1167/iovs.10-5527  0.72
2010 Lee S, Reinhardt JM, Cattin PC, Abràmoff MD. Objective and expert-independent validation of retinal image registration algorithms by a projective imaging distortion model. Medical Image Analysis. 14: 539-49. PMID 20493760 DOI: 10.1016/j.media.2010.04.001  0.56
2010 Abràmoff MD, Reinhardt JM, Russell SR, Folk JC, Mahajan VB, Niemeijer M, Quellec G. Automated early detection of diabetic retinopathy. Ophthalmology. 117: 1147-54. PMID 20399502 DOI: 10.1016/j.ophtha.2010.03.046  0.72
2010 Ding K, Bayouth JE, Buatti JM, Christensen GE, Reinhardt JM. 4DCT-based measurement of changes in pulmonary function following a course of radiation therapy. Medical Physics. 37: 1261-72. PMID 20384264 DOI: 10.1118/1.3312210  0.72
2010 Sieren JC, Weydert J, Namati E, Thiesse J, Sieren JP, Reinhardt JM, Hoffman EA, McLennan G. A process model for direct correlation between computed tomography and histopathology application in lung cancer. Academic Radiology. 17: 169-80. PMID 19926496 DOI: 10.1016/j.acra.2009.09.006  0.72
2009 Ding K, Yin Y, Cao K, Christensen GE, Lin CL, Hoffman EA, Reinhardt JM. Evaluation of lobar biomechanics during respiration using image registration. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 12: 739-46. PMID 20426054 DOI: 10.1007/978-3-642-04268-3_91  0.72
2009 Robinson TE, Long FR, Raman P, Saha P, Emond MJ, Reinhardt JM, Raman R, Brody AS. An airway phantom to standardize CT acquisition in multicenter clinical trials. Academic Radiology. 16: 1134-41. PMID 19467609 DOI: 10.1016/j.acra.2009.02.018  0.72
2009 Ryken TC, Kim J, Owen BD, Christensen GE, Reinhardt JM. Engineering patient-specific drill templates and bioabsorbable posterior cervical plates: a feasibility study. Journal of Neurosurgery. Spine. 10: 129-32. PMID 19278326 DOI: 10.3171/2008.11.SPI0817677  0.72
2009 Ukil S, Reinhardt JM. Anatomy-guided lung lobe segmentation in X-ray CT images. Ieee Transactions On Medical Imaging. 28: 202-14. PMID 19188109 DOI: 10.1109/TMI.2008.929101  1
2009 Ryken TC, Owen BD, Christensen GE, Reinhardt JM. Image-based drill templates for cervical pedicle screw placement. Journal of Neurosurgery. Spine. 10: 21-6. PMID 19119928 DOI: 10.3171/2008.9.SPI08229  0.72
2008 Li B, Christensen GE, Hoffman EA, McLennan G, Reinhardt JM. Pulmonary CT image registration and warping for tracking tissue deformation during the respiratory cycle through 3D consistent image registration. Medical Physics. 35: 5575-83. PMID 19175115 DOI: 10.1118/1.3005633  0.72
2008 Reinhardt JM, Ding K, Cao K, Christensen GE, Hoffman EA, Bodas SV. Registration-based estimates of local lung tissue expansion compared to xenon CT measures of specific ventilation. Medical Image Analysis. 12: 752-63. PMID 18501665 DOI: 10.1016/j.media.2008.03.007  0.72
2008 Suter MJ, Reinhardt JM, McLennan G. Integrated CT/bronchoscopy in the central airways: preliminary results. Academic Radiology. 15: 786-98. PMID 18486014 DOI: 10.1016/j.acra.2008.03.001  0.72
2008 Fuld MK, Easley RB, Saba OI, Chon D, Reinhardt JM, Hoffman EA, Simon BA. CT-measured regional specific volume change reflects regional ventilation in supine sheep. Journal of Applied Physiology (Bethesda, Md. : 1985). 104: 1177-84. PMID 18258804 DOI: 10.1152/japplphysiol.00212.2007  0.72
2007 Lee S, Abramoff MD, Reinhardt JM. Validation of retinal image registration algorithms by a projective imaging distortion model. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2007: 6472-5. PMID 18003507 DOI: 10.1109/IEMBS.2007.4353841  0.72
2007 Owen BD, Christensen GE, Reinhardt JM, Ryken TC. Rapid prototype patient-specific drill template for cervical pedicle screw placement. Computer Aided Surgery : Official Journal of the International Society For Computer Aided Surgery. 12: 303-8. PMID 17957538 DOI: 10.3109/10929080701662826  0.72
2007 Reinhardt JM, Christensen GE, Hoffman EA, Ding K, Cao K. Registration-derived estimates of local lung expansion as surrogates for regional ventilation. Information Processing in Medical Imaging : Proceedings of the ... Conference. 20: 763-74. PMID 17633746  0.72
2007 Meinel LA, Stolpen AH, Berbaum KS, Fajardo LL, Reinhardt JM. Breast MRI lesion classification: improved performance of human readers with a backpropagation neural network computer-aided diagnosis (CAD) system. Journal of Magnetic Resonance Imaging : Jmri. 25: 89-95. PMID 17154399 DOI: 10.1002/jmri.20794  0.32
2006 Zhang L, Hoffman EA, Reinhardt JM. Atlas-driven lung lobe segmentation in volumetric X-ray CT images. Ieee Transactions On Medical Imaging. 25: 1-16. PMID 16398410 DOI: 10.1109/TMI.2005.859209  0.72
2005 Simon BA, Christensen GE, Low DA, Reinhardt JM. Computed tomography studies of lung mechanics. Proceedings of the American Thoracic Society. 2: 517-21, 506-7. PMID 16352757 DOI: 10.1513/pats.200507-076DS  0.72
2005 Ukil S, Reinhardt JM. Smoothing lung segmentation surfaces in three-dimensional X-ray CT images using anatomic guidance. Academic Radiology. 12: 1502-11. PMID 16321738 DOI: 10.1016/j.acra.2005.08.008  1
2005 Suter M, McLennan G, Reinhardt JM, Riker D, Hoffman EA. Macro-optical color assessment of the pulmonary airways with subsequent three-dimensional multidetector-x-ray-computed-tomography assisted display. Journal of Biomedical Optics. 10: 051703. PMID 16292955 DOI: 10.1117/1.2112767  0.72
2004 Hoffman EA, Clough AV, Christensen GE, Lin CL, McLennan G, Reinhardt JM, Simon BA, Sonka M, Tawhai MH, van Beek EJ, Wang G. The comprehensive imaging-based analysis of the lung: a forum for team science. Academic Radiology. 11: 1370-80. PMID 15596375 DOI: 10.1016/j.acra.2004.09.005  0.72
2003 Hoffman EA, Reinhardt JM, Sonka M, Simon BA, Guo J, Saba O, Chon D, Samrah S, Shikata H, Tschirren J, Palagyi K, Beck KC, McLennan G. Characterization of the interstitial lung diseases via density-based and texture-based analysis of computed tomography images of lung structure and function. Academic Radiology. 10: 1104-18. PMID 14587629 DOI: 10.1016/S1076-6332(03)00330-1  0.72
2003 Aykac D, Hoffman EA, McLennan G, Reinhardt JM. Segmentation and analysis of the human airway tree from three-dimensional X-ray CT images. Ieee Transactions On Medical Imaging. 22: 940-50. PMID 12906248 DOI: 10.1109/TMI.2003.815905  0.72
2003 Saba OI, Hoffman EA, Reinhardt JM. Maximizing quantitative accuracy of lung airway lumen and wall measures obtained from X-ray CT imaging Journal of Applied Physiology. 95: 1063-1075. PMID 12754180  0.72
2003 Li B, Christensen GE, Hoffman EA, McLennan G, Reinhardt JM. Establishing a normative atlas of the human lung: intersubject warping and registration of volumetric CT images. Academic Radiology. 10: 255-65. PMID 12643552 DOI: 10.1016/S1076-6332(03)80099-5  0.72
2002 Kiraly AP, Higgins WE, McLennan G, Hoffman EA, Reinhardt JM. Three-dimensional human airway segmentation methods for clinical virtual bronchoscopy. Academic Radiology. 9: 1153-68. PMID 12385510 DOI: 10.1016/S1076-6332(03)80517-2  0.72
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