Scott Nelson - Publications

Affiliations: 
BBMB Iowa State University, Ames, IA, United States 

34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Delzell SB, Nelson SW, Frost MP, Klingbeil MM. Mitochondrial DNA Polymerase POLIB Contains a Novel Polymerase Domain Insertion That Confers Dominant Exonuclease Activity. Biochemistry. PMID 36399653 DOI: 10.1021/acs.biochem.2c00392  0.329
2022 Nieto NS, Parrott EE, Nelson SW. Ribonucleotide Misincorporation and Reverse Transcriptase Activities of Apicoplast DNA Polymerase. Biochemistry. PMID 36346714 DOI: 10.1021/acs.biochem.2c00450  0.314
2022 Chheda PR, Nieto N, Kaur S, Beck JM, Beck JR, Honzatko R, Kerns RJ, Nelson SW. Promising antimalarials targeting apicoplast DNA polymerase from Plasmodium falciparum. European Journal of Medicinal Chemistry. 243: 114751. PMID 36191407 DOI: 10.1016/j.ejmech.2022.114751  0.366
2020 Streff HE, Gao Y, Nelson SW. Functional evaluation of the C-terminal region of bacteriophage T4 Rad50. Biochemical and Biophysical Research Communications. PMID 32238267 DOI: 10.1016/j.bbrc.2020.02.172  0.33
2018 Teklemariam TA, Rivera OD, Nelson SW. Kinetic Analysis of the Exonuclease Activity of the Bacteriophage T4 Mre11-Rad50 Complex. Methods in Enzymology. 600: 135-156. PMID 29458756 DOI: 10.1016/bs.mie.2017.12.007  0.314
2016 Milton ME, Choe JY, Honzatko RB, Nelson SW. Crystal structure of the apicoplast DNA polymerase from Plasmodium falciparum: the first look at a plastidic A-family DNA polymerase. Journal of Molecular Biology. PMID 27487482 DOI: 10.1016/J.Jmb.2016.07.016  0.722
2016 Milton ME, Nelson SW. Replication and Maintenance of the Plasmodium falciparum Apicoplast Genome. Molecular and Biochemical Parasitology. PMID 27338018 DOI: 10.1016/J.Molbiopara.2016.06.006  0.705
2016 Milton M, Honzatko R, Nelson S. Crystal structure of the Plasmodium falciparum apicoplast DNA polymerase F1000research. 5. DOI: 10.7490/F1000Research.1111479.1  0.729
2016 Milton M, Nelson S. X-ray crystallography and high-throughput assay to identify inhibitors of the Plasmodium falciparum apicoplast DNA polymerase F1000research. 5. DOI: 10.7490/F1000Research.1111476.1  0.721
2016 Milton M, Parrot E, Singh R, Nelson S. Anti-malaria drug discovery: high-throughput assay to identify inhibitors of the Plasmodium falciparum apicoplast DNA polymerase F1000research. 5. DOI: 10.7490/F1000Research.1111468.1  0.722
2015 Milton ME, Choe JY, Honzatko RB, Nelson SW. Crystallization and preliminary X-ray analysis of the Plasmodium falciparum apicoplast DNA polymerase. Acta Crystallographica. Section F, Structural Biology Communications. 71: 333-7. PMID 25760711 DOI: 10.1107/S2053230X15002423  0.719
2014 Miller ME, Parrott EE, Singh R, Nelson SW. A High-Throughput Assay to Identify Inhibitors of the Apicoplast DNA Polymerase from Plasmodium falciparum. Journal of Biomolecular Screening. 19: 966-972. PMID 24687154 DOI: 10.1177/1087057114528738  0.342
2013 van Dongen SF, Clerx J, Nørgaard K, Bloemberg TG, Cornelissen JJ, Trakselis MA, Nelson SW, Benkovic SJ, Rowan AE, Nolte RJ. A clamp-like biohybrid catalyst for DNA oxidation. Nature Chemistry. 5: 945-51. PMID 24153373 DOI: 10.1038/Nchem.1752  0.658
2013 Wingert BM, Parrott EE, Nelson SW. Fidelity, mismatch extension, and proofreading activity of the Plasmodium falciparum apicoplast DNA polymerase. Biochemistry. 52: 7723-30. PMID 24147857 DOI: 10.1021/bi400708m  0.335
2013 Perumal SK, Nelson SW, Benkovic SJ. Interaction of T4 UvsW helicase and single-stranded DNA binding protein gp32 through its carboxy-terminal acidic tail. Journal of Molecular Biology. 425: 2823-39. PMID 23732982 DOI: 10.1016/J.Jmb.2013.05.012  0.47
2011 Herdendorf TJ, Albrecht DW, Benkovic SJ, Nelson SW. Biochemical characterization of bacteriophage T4 Mre11-Rad50 complex. The Journal of Biological Chemistry. 286: 2382-92. PMID 21081488 DOI: 10.1074/Jbc.M110.178871  0.456
2010 Nelson SW, Benkovic SJ. Response of the bacteriophage T4 replisome to noncoding lesions and regression of a stalled replication fork. Journal of Molecular Biology. 401: 743-56. PMID 20600127 DOI: 10.1016/J.Jmb.2010.06.027  0.46
2009 Nelson SW, Perumal SK, Benkovic SJ. Processive and unidirectional translocation of monomeric UvsW helicase on single-stranded DNA. Biochemistry. 48: 1036-46. PMID 19154117 DOI: 10.1021/Bi801792Q  0.503
2009 Nelson SW, Zhuang Z, Spiering MM, Benkovic SJ. T4 phage replisome Viral Genome Replication. 337-364. DOI: 10.1007/b135974_16  0.325
2008 Spiering MM, Nelson SW, Benkovic SJ. Repetitive lagging strand DNA synthesis by the bacteriophage T4 replisome. Molecular Biosystems. 4: 1070-4. PMID 18931782 DOI: 10.1039/B812163J  0.438
2008 Nelson SW, Kumar R, Benkovic SJ. RNA primer handoff in bacteriophage T4 DNA replication: the role of single-stranded DNA-binding protein and polymerase accessory proteins. The Journal of Biological Chemistry. 283: 22838-46. PMID 18511422 DOI: 10.1074/Jbc.M802762200  0.488
2007 Nelson SW, Benkovic SJ. The T4 phage UvsW protein contains both DNA unwinding and strand annealing activities. The Journal of Biological Chemistry. 282: 407-16. PMID 17092935 DOI: 10.1074/Jbc.M608153200  0.503
2006 Yang J, Nelson SW, Benkovic SJ. The control mechanism for lagging strand polymerase recycling during bacteriophage T4 DNA replication. Molecular Cell. 21: 153-64. PMID 16427006 DOI: 10.1016/J.Molcel.2005.11.029  0.466
2006 Nelson SW, Yang J, Benkovic SJ. Site-directed mutations of T4 helicase loading protein (gp59) reveal multiple modes of DNA polymerase inhibition and the mechanism of unlocking by gp41 helicase. The Journal of Biological Chemistry. 281: 8697-706. PMID 16407253 DOI: 10.1074/Jbc.M512185200  0.481
2005 Nelson SW, Binkowski DJ, Honzatko RB, Fromm HJ. Mechanism of action of Escherichia coli phosphoribosylaminoimidazolesuccinocarboxamide synthetase. Biochemistry. 44: 766-74. PMID 15641804 DOI: 10.1021/Bi048191W  0.491
2004 Nelson SW, Honzatko RB, Fromm HJ. Origin of cooperativity in the activation of fructose-1,6-bisphosphatase by Mg2+. The Journal of Biological Chemistry. 279: 18481-7. PMID 14978036 DOI: 10.1074/Jbc.M308811200  0.487
2003 Choe JY, Nelson SW, Arienti KL, Axe FU, Collins TL, Jones TK, Kimmich RD, Newman MJ, Norvell K, Ripka WC, Romano SJ, Short KM, Slee DH, Fromm HJ, Honzatko RB. Inhibition of fructose-1,6-bisphosphatase by a new class of allosteric effectors. The Journal of Biological Chemistry. 278: 51176-83. PMID 14530289 DOI: 10.1074/Jbc.M308396200  0.52
2003 Choe JY, Nelson SW, Fromm HJ, Honzatko RB. Interaction of Tl+ with product complexes of fructose-1,6-bisphosphatase. The Journal of Biological Chemistry. 278: 16008-14. PMID 12595529 DOI: 10.1074/Jbc.M212394200  0.482
2002 Nelson SW, Honzatko RB, Fromm HJ. Hybrid tetramers of porcine liver fructose-1,6-bisphosphatase reveal multiple pathways of allosteric inhibition. The Journal of Biological Chemistry. 277: 15539-45. PMID 11854289 DOI: 10.1074/Jbc.M112304200  0.503
2001 Wen J, Nelson SW, Honzatko RB, Fromm HJ, Petrich JW. Environment of tryptophan 57 in porcine fructose-1,6-bisphosphatase studied by time-resolved fluorescence and site-directed mutagenesis. Photochemistry and Photobiology. 74: 679-85. PMID 11723795 DOI: 10.1562/0031-8655(2001)074<0679:Eotipf>2.0.Co;2  0.49
2001 Nelson SW, Honzatko RB, Fromm HJ. Spontaneous subunit exchange in porcine liver fructose-1,6-bisphosphatase Febs Letters. 492: 254-258. PMID 11257504 DOI: 10.1016/S0014-5793(01)02262-1  0.458
2001 Nelson SW, Kurbanov FT, Honzatko RB, Fromm HJ. The N-terminal Segment of Recombinant Porcine Fructose-1,6-bisphosphatase Participates in the Allosteric Regulation of Catalysis Journal of Biological Chemistry. 276: 6119-6124. PMID 11096109 DOI: 10.1074/Jbc.M009485200  0.505
2000 Nelson SW, Iancu CV, Choe JY, Honzatko RB, Fromm HJ. Tryptophan fluorescence reveals the conformational state of a dynamic loop in recombinant porcine fructose-1,6-bisphosphatase. Biochemistry. 39: 11100-6. PMID 10998248 DOI: 10.1021/Bi000609C  0.48
2000 Nelson SW, Choe JY, Honzatko RB, Fromm HJ. Mutations in the hinge of a dynamic loop broadly influence functional properties of fructose-1,6-bisphosphatase Journal of Biological Chemistry. 275: 29986-29992. PMID 10896931 DOI: 10.1074/Jbc.M000473200  0.472
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