Barrett C. Foat - Publications
Affiliations: | 2007 | Columbia University, New York, NY |
Year | Citation | Score | |||
---|---|---|---|---|---|
2009 | Foat BC, Stormo GD. Discovering structural cis-regulatory elements by modeling the behaviors of mRNAs. Molecular Systems Biology. 5: 268. PMID 19401680 DOI: 10.1038/Msb.2009.24 | 0.608 | |||
2008 | Foat BC, Tepper RG, Bussemaker HJ. TransfactomeDB: a resource for exploring the nucleotide sequence specificity and condition-specific regulatory activity of trans-acting factors. Nucleic Acids Research. 36: D125-31. PMID 17947326 DOI: 10.1093/Nar/Gkm828 | 0.505 | |||
2007 | Bussemaker HJ, Foat BC, Ward LD. Predictive modeling of genome-wide mRNA expression: from modules to molecules. Annual Review of Biophysics and Biomolecular Structure. 36: 329-47. PMID 17311525 DOI: 10.1146/Annurev.Biophys.36.040306.132725 | 0.734 | |||
2006 | Foat BC, Morozov AV, Bussemaker HJ. Statistical mechanical modeling of genome-wide transcription factor occupancy data by MatrixREDUCE. Bioinformatics (Oxford, England). 22: e141-9. PMID 16873464 DOI: 10.1093/Bioinformatics/Btl223 | 0.752 | |||
2005 | Foat BC, Houshmandi SS, Olivas WM, Bussemaker HJ. Profiling condition-specific, genome-wide regulation of mRNA stability in yeast. Proceedings of the National Academy of Sciences of the United States of America. 102: 17675-80. PMID 16317069 DOI: 10.1073/Pnas.0503803102 | 0.712 | |||
2005 | Boorsma A, Foat BC, Vis D, Klis F, Bussemaker HJ. T-profiler: scoring the activity of predefined groups of genes using gene expression data. Nucleic Acids Research. 33: W592-5. PMID 15980543 DOI: 10.1093/Nar/Gki484 | 0.679 | |||
2004 | Gao F, Foat BC, Bussemaker HJ. Defining transcriptional networks through integrative modeling of mRNA expression and transcription factor binding data. Bmc Bioinformatics. 5: 31. PMID 15113405 DOI: 10.1186/1471-2105-5-31 | 0.735 | |||
2002 | Zhang Y, Ma C, Delohery T, Nasipak B, Foat BC, Bounoutas A, Bussemaker HJ, Kim SK, Chalfie M. Identification of genes expressed in C. elegans touch receptor neurons. Nature. 418: 331-5. PMID 12124626 DOI: 10.1038/Nature00891 | 0.659 | |||
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