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Tao Zhao - Publications

Affiliations: 
2014-2018 Biosystematics Wageningen University and Research Center, The Netherlands 
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhang Y, Kashkooli AB, Blom S, Zhao T, Bouwmeester HJ, Kappers IF. The Capsicum terpenoid biosynthetic module is affected by spider-mite herbivory. Plant Molecular Biology. PMID 37995005 DOI: 10.1007/s11103-023-01390-0  0.443
2023 Yang F, Luo J, Guo W, Zhang Y, Liu Y, Yu Z, Sun Y, Li M, Ma F, Zhao T. Origin and early divergence of tandem duplicated sorbitol transporter genes in Rosaceae: insights from evolutionary analysis of the SOT gene family in angiosperms. The Plant Journal : For Cell and Molecular Biology. PMID 37983569 DOI: 10.1111/tpj.16533  0.4
2023 Li C, Zhang L, Wang X, Yu C, Zhao T, Liu B, Li H, Liu J, Zhang C. The transcription factor HBF1 directly activates expression of multiple flowering time repressors to delay rice flowering. Abiotech. 4: 213-223. PMID 37970466 DOI: 10.1007/s42994-023-00107-7  0.343
2023 Qin C, Li YH, Li D, Zhang X, Kong L, Zhou Y, Lyu X, Ji R, Wei X, Cheng Q, Jia Z, Li X, Wang Q, Wang Y, Huang W, ... ... Zhao T, et al. PH13 improves soybean shade traits and enhances yield for high-density planting at high latitudes. Nature Communications. 14: 6813. PMID 37884530 DOI: 10.1038/s41467-023-42608-5  0.357
2023 Xiong W, Risse J, Berke L, Zhao T, van de Geest H, Oplaat C, Busscher M, Ferreira de Carvalho J, van der Meer IM, Verhoeven KJF, Schranz ME, Vijverberg K. Phylogenomic analysis provides insights into and gene diversification and floral development of the Asteraceae, supported by genome and transcriptome sequences from dandelion (). Frontiers in Plant Science. 14: 1198909. PMID 37457342 DOI: 10.3389/fpls.2023.1198909  0.651
2023 Li Z, Zhao T, Liu J, Li H, Liu B. Shade-Induced Leaf Senescence in Plants. Plants (Basel, Switzerland). 12. PMID 37050176 DOI: 10.3390/plants12071550  0.329
2023 Sun Y, Liu Y, Liang J, Luo J, Yang F, Feng P, Wang H, Guo B, Ma F, Zhao T. Identification of PLATZ genes in and expression characteristics of MdPLATZs in response to drought and ABA stresses. Frontiers in Plant Science. 13: 1109784. PMID 36743567 DOI: 10.3389/fpls.2022.1109784  0.4
2023 Xue JY, Li Z, Hu SY, Kao SM, Zhao T, Wang JY, Wang Y, Chen M, Qiu Y, Fan HY, Liu Y, Shao ZQ, Van de Peer Y. The Saururus chinensis genome provides insights into the evolution of pollination strategies and herbaceousness in magnoliids. The Plant Journal : For Cell and Molecular Biology. PMID 36602036 DOI: 10.1111/tpj.16097  0.459
2023 Almeida-Silva F, Zhao T, Ullrich KK, Schranz ME, Van de Peer Y. syntenet: an R/Bioconductor package for the inference and analysis of synteny networks. Bioinformatics (Oxford, England). 39. PMID 36539202 DOI: 10.1093/bioinformatics/btac806  0.576
2022 Li Y, Liu H, Steenwyk JL, LaBella AL, Harrison MC, Groenewald M, Zhou X, Shen XX, Zhao T, Hittinger CT, Rokas A. Contrasting modes of macro and microsynteny evolution in a eukaryotic subphylum. Current Biology : Cb. PMID 36334587 DOI: 10.1016/j.cub.2022.10.025  0.374
2022 Xu Z, Wang R, Kong K, Begum N, Almakas A, Liu J, Li H, Liu B, Zhao T, Zhao T. An APETALA2/ethylene responsive factor transcription factor GmCRF4a regulates plant height and auxin biosynthesis in soybean. Frontiers in Plant Science. 13: 983650. PMID 36147224 DOI: 10.3389/fpls.2022.983650  0.442
2022 Gamboa-Tuz SD, Pereira-Santana A, Zhao T, Schranz ME. Applying Synteny Networks (SynNet) to Study Genomic Arrangements of Protein-Coding Genes in Plants. Methods in Molecular Biology (Clifton, N.J.). 2512: 199-215. PMID 35818007 DOI: 10.1007/978-1-0716-2429-6_12  0.65
2022 Ji R, Xu X, Liu J, Zhao T, Li H, Zhai J, Liu B. Induced Mutation in Enhances the Performance of Soybean under Dense Planting Conditions. International Journal of Molecular Sciences. 23. PMID 35628205 DOI: 10.3390/ijms23105394  0.347
2022 Xu Z, Li Z, Ren F, Gao R, Wang Z, Zhang J, Zhao T, Ma X, Pu X, Xin T, Rombauts S, Sun W, Van de Peer Y, Chen S, Song J. The genome of Corydalis reveals the evolution of benzylisoquinoline alkaloid biosynthesis in Ranunculales. The Plant Journal : For Cell and Molecular Biology. PMID 35476217 DOI: 10.1111/tpj.15788  0.367
2021 Zhao T, Zwaenepoel A, Xue JY, Kao SM, Li Z, Schranz ME, Van de Peer Y. Whole-genome microsynteny-based phylogeny of angiosperms. Nature Communications. 12: 3498. PMID 34108452 DOI: 10.1038/s41467-021-23665-0  0.634
2020 Pereira-Santana A, Gamboa-Tuz SD, Zhao T, Schranz ME, Vinuesa P, Bayona A, Rodríguez-Zapata LC, Castano E. Fibrillarin evolution through the Tree of Life: Comparative genomics and microsynteny network analyses provide new insights into the evolutionary history of Fibrillarin. Plos Computational Biology. 16: e1008318. PMID 33075080 DOI: 10.1371/journal.pcbi.1008318  0.671
2020 Li C, Li YH, Li Y, Lu H, Hong H, Yu T, Li H, Zhao T, Zhou X, Liu J, Zhou X, Jackson SA, Liu B, Qiu LJ. A Domestication-Associated Gene GmPRR3b Regulates Circadian Clock and Flowering Time in Soybean. Molecular Plant. PMID 32017998 DOI: 10.1016/J.Molp.2020.01.014  0.342
2019 Xue JY, Zhao T, Liu Y, Liu Y, Zhang YX, Zhang GQ, Chen H, Zhou GC, Zhang SZ, Shao ZQ. Genome- Wide Analysis of the Nucleotide Binding Site Leucine-Rich Repeat Genes of Four Orchids Revealed Extremely Low Numbers of Disease Resistance Genes. Frontiers in Genetics. 10: 1286. PMID 31998358 DOI: 10.3389/fgene.2019.01286  0.385
2019 Han Y, Yu J, Zhao T, Cheng T, Wang J, Yang W, Pan H, Zhang Q. Dissecting the Genome-Wide Evolution and Function of R2R3-MYB Transcription Factor Family in . Genes. 10. PMID 31635348 DOI: 10.3390/genes10100823  0.516
2019 Chen Q, Jiang T, Liu YX, Liu H, Zhao T, Liu Z, Gan X, Hallab A, Wang X, He J, Ma Y, Zhang F, Jin T, Schranz ME, Wang Y, et al. Recently duplicated sesterterpene (C25) gene clusters in Arabidopsis thaliana modulate root microbiota. Science China. Life Sciences. PMID 31079337 DOI: 10.1007/S11427-019-9521-2  0.659
2019 Xiong L, Li C, Li H, Lyu X, Zhao T, Liu J, Zuo Z, Liu B. A transient expression system in soybean mesophyll protoplasts reveals the formation of cytoplasmic GmCRY1 photobody-like structures. Science China. Life Sciences. PMID 30929191 DOI: 10.1007/S11427-018-9496-5  0.337
2019 Zhao T, Schranz ME. Network-based microsynteny analysis identifies major differences and genomic outliers in mammalian and angiosperm genomes. Proceedings of the National Academy of Sciences of the United States of America. PMID 30674676 DOI: 10.1073/pnas.1801757116  0.654
2018 Artur MAS, Zhao T, Ligterink W, Schranz ME, Hilhorst HWM. Dissecting the genomic diversification of LATE EMBRYOGENESIS ABUNDANT (LEA) protein gene families in plants. Genome Biology and Evolution. PMID 30407531 DOI: 10.1093/gbe/evy248  0.687
2018 Arisz SA, Heo JY, Koevoets IT, Zhao T, van Egmond P, Meyer J, Zeng W, Niu X, Wang B, Mitchell-Olds T, Schranz ME, Testerink C. Diacylglycerol acyltransferase 1 contributes to freezing tolerance. Plant Physiology. PMID 29907701 DOI: 10.1104/Pp.18.00503  0.543
2018 Gamboa-Tuz SD, Pereira-Santana A, Zhao T, Eric Schranz M, Castano E, Rodriguez-Zapata LC. New Insights into the Phylogeny of the TMBIM Superfamily across the Three of Life: Comparative Genomics and Synteny Networks Reveal Independent Evolution of the BI and LFG Families in Plants. Molecular Phylogenetics and Evolution. PMID 29702215 DOI: 10.1016/j.ympev.2018.04.032  0.434
2017 Zhang Y, Yu C, Lin J, Liu J, Liu B, Wang J, Huang A, Li H, Zhao T. OsMPH1 regulates plant height and improves grain yield in rice. Plos One. 12: e0180825. PMID 28708834 DOI: 10.1371/Journal.Pone.0180825  0.434
2017 Zhao T, Holmer R, Bruijn S, Angenent GC, van den Burg HA, Schranz ME. Phylogenomic Synteny Network Analysis of MADS-Box Transcription Factor Genes Reveals Lineage-Specific Transpositions, Ancient Tandem Duplications, and Deep Positional Conservation. The Plant Cell. PMID 28584165 DOI: 10.1105/tpc.17.00312  0.682
2017 Zhao T, Schranz ME. Network approaches for plant phylogenomic synteny analysis. Current Opinion in Plant Biology. 36: 129-134. PMID 28327435 DOI: 10.1016/j.pbi.2017.03.001  0.64
2016 Li C, Zou X, Zhang C, Shao Q, Liu J, Liu B, Li H, Zhao T. OsLBD3-7 Overexpression Induced Adaxially Rolled Leaves in Rice. Plos One. 11: e0156413. PMID 27258066 DOI: 10.1371/Journal.Pone.0156413  0.342
2016 Zhang C, Liu J, Zhao T, Gomez A, Li C, Yu C, Li H, Lin J, Yang Y, Liu B, Lin C. A Drought-inducible bZIP Transcription Factor OsABF1 Delays Reproductive Timing in Rice. Plant Physiology. PMID 26945049 DOI: 10.1104/Pp.16.01691  0.343
2015 Li W, Zhang F, Chang Y, Zhao T, Schranz ME, Wang G. Nicotinate O-Glucosylation Is an Evolutionarily Metabolic Trait Important for Seed Germination under Stress Conditions in Arabidopsis thaliana. The Plant Cell. PMID 26116607 DOI: 10.1105/Tpc.15.00223  0.611
2014 Zhao T, Xia H, Liu J, Ma F. The gene family of dehydration responsive element-binding transcription factors in grape (Vitis vinifera): genome-wide identification and analysis, expression profiles, and involvement in abiotic stress resistance. Molecular Biology Reports. 41: 1577-90. PMID 24402876 DOI: 10.1007/s11033-013-3004-6  0.398
2012 Zhao T, Liang D, Wang P, Liu J, Ma F. Genome-wide analysis and expression profiling of the DREB transcription factor gene family in Malus under abiotic stress. Molecular Genetics and Genomics : Mgg. 287: 423-36. PMID 22526429 DOI: 10.1007/s00438-012-0687-7  0.368
2006 Zhao T, Ni Z, Dai Y, Yao Y, Nie X, Sun Q. Characterization and expression of 42 MADS-box genes in wheat (Triticum aestivum L.). Molecular Genetics and Genomics : Mgg. 276: 334-50. PMID 16858583 DOI: 10.1007/s00438-006-0147-3  0.357
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