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David Rhodes - Publications

Affiliations: 
Horticulture Purdue University, West Lafayette, IN, United States 
Area:
Plant Physiology, Plant Biochemistry, Metabolic Modeling, Flux Analysis
Website:
https://ag.purdue.edu/hla/Pages/profile.aspx?strAlias=drhodes&intDirDeptID=16
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65 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 McCoy RM, Meyer GW, Rhodes D, Murray GC, Sors TG, Widhalm JR. Exploratory Study on the Foliar Incorporation and Stability of Isotopically Labeled Amino Acids Applied to Turfgrass Agronomy. 10: 358. DOI: 10.3390/Agronomy10030358  0.429
2019 Qian Y, Lynch JH, Guo L, Rhodes D, Morgan JA, Dudareva N. Completion of the cytosolic post-chorismate phenylalanine biosynthetic pathway in plants. Nature Communications. 10: 15. PMID 30604768 DOI: 10.1038/S41467-018-07969-2  0.656
2017 Lynch JH, Orlova I, Zhao C, Guo L, Jaini R, Maeda H, Akhtar T, Cruz-Lebron J, Rhodes D, Morgan J, Pilot G, Pichersky E, Dudareva N. Multifaceted Plant Reponses to Circumvent Phe Hyperaccumulation by Downregulation of Flux through the Shikimate Pathway and by Vacuolar Phe Sequestration. The Plant Journal : For Cell and Molecular Biology. PMID 28977710 DOI: 10.1111/Tpj.13730  0.674
2016 Widhalm JR, Rhodes D. Biosynthesis and molecular actions of specialized 1,4-naphthoquinone natural products produced by horticultural plants. Horticulture Research. 3: 16046. PMID 27688890 DOI: 10.1038/Hortres.2016.46  0.382
2015 Widhalm JR, Gutensohn M, Yoo H, Adebesin F, Qian Y, Guo L, Jaini R, Lynch JH, McCoy RM, Shreve JT, Thimmapuram J, Rhodes D, Morgan JA, Dudareva N. Identification of a plastidial phenylalanine exporter that influences flux distribution through the phenylalanine biosynthetic network. Nature Communications. 6: 8142. PMID 26356302 DOI: 10.1038/Ncomms9142  0.652
2014 Rhodes D, Stewart GR. A procedure for the in vivo determination of enzyme activity in higher plant tissue. Planta. 118: 133-44. PMID 24442259 DOI: 10.1007/Bf00388389  0.524
2014 Rhodes D, Rendon GA, Stewart GR. The control of glutamine synthetase level in Lemna minor L. Planta. 125: 201-11. PMID 24435433 DOI: 10.1007/Bf00385596  0.57
2014 Rhodes D, Rendon GA, Stewart GR. The regulation of ammonia assimilating enzymes in Lemma minor. Planta. 129: 203-10. PMID 24430957 DOI: 10.1007/Bf00398258  0.56
2014 Marshall-Colon A, Sengupta N, Rhodes D, Morgan JA. Simulating labeling to estimate kinetic parameters for flux control analysis. Methods in Molecular Biology (Clifton, N.J.). 1090: 211-22. PMID 24222418 DOI: 10.1007/978-1-62703-688-7_13  0.688
2013 Yoo H, Widhalm JR, Qian Y, Maeda H, Cooper BR, Jannasch AS, Gonda I, Lewinsohn E, Rhodes D, Dudareva N. An alternative pathway contributes to phenylalanine biosynthesis in plants via a cytosolic tyrosine:phenylpyruvate aminotransferase. Nature Communications. 4: 2833. PMID 24270997 DOI: 10.1038/Ncomms3833  0.66
2012 Klempien A, Kaminaga Y, Qualley A, Nagegowda DA, Widhalm JR, Orlova I, Shasany AK, Taguchi G, Kish CM, Cooper BR, D'Auria JC, Rhodes D, Pichersky E, Dudareva N. Contribution of CoA ligases to benzenoid biosynthesis in petunia flowers. The Plant Cell. 24: 2015-30. PMID 22649270 DOI: 10.1105/Tpc.112.097519  0.596
2010 Maeda H, Shasany AK, Schnepp J, Orlova I, Taguchi G, Cooper BR, Rhodes D, Pichersky E, Dudareva N. RNAi suppression of Arogenate Dehydratase1 reveals that phenylalanine is synthesized predominantly via the arogenate pathway in petunia petals. The Plant Cell. 22: 832-49. PMID 20215586 DOI: 10.1105/Tpc.109.073247  0.628
2010 Colón AM, Sengupta N, Rhodes D, Dudareva N, Morgan J. A kinetic model describes metabolic response to perturbations and distribution of flux control in the benzenoid network of Petunia hybrida. The Plant Journal : For Cell and Molecular Biology. 62: 64-76. PMID 20070567 DOI: 10.1111/J.1365-313X.2010.04127.X  0.626
2010 Peel GJ, Mickelbart MV, Rhodes D. Choline metabolism in glycinebetaine accumulating and non-accumulating near-isogenic lines of Zea mays and Sorghum bicolor. Phytochemistry. 71: 404-14. PMID 20004921 DOI: 10.1016/J.Phytochem.2009.11.002  0.413
2010 Rhodes D, Rich PJ, Brunk DG. Amino Acid Metabolism of Lemna minor L. : IV. N-Labeling Kinetics of the Amide and Amino Groups of Glutamine and Asparagine. Plant Physiology. 89: 1161-71. PMID 16666680 DOI: 10.1104/Pp.89.4.1161  0.372
2010 Rhodes D, Rich PJ. Preliminary Genetic Studies of the Phenotype of Betaine Deficiency in Zea mays L. Plant Physiology. 88: 102-8. PMID 16666247 DOI: 10.1104/Pp.88.1.102  0.336
2010 Brunk DG, Rhodes D. Amino Acid Metabolism of Lemna minor L. : III. Responses to Aminooxyacetate. Plant Physiology. 87: 447-53. PMID 16666162 DOI: 10.1104/Pp.87.2.447  0.404
2010 Binzel ML, Hasegawa PM, Rhodes D, Handa S, Handa AK, Bressan RA. Solute Accumulation in Tobacco Cells Adapted to NaCl. Plant Physiology. 84: 1408-15. PMID 16665618 DOI: 10.1104/Pp.84.4.1408  0.307
2010 Rosenthal GA, Rhodes D. l-Canavanine Transport and Utilization in Developing Jack Bean, Canavalia ensiformis (L.) DC. [Leguminosae]. Plant Physiology. 76: 541-4. PMID 16663877 DOI: 10.1104/Pp.76.2.541  0.429
2010 Hanson AD, Rhodes D. C Tracer Evidence for Synthesis of Choline and Betaine via Phosphoryl Base Intermediates in Salinized Sugarbeet Leaves. Plant Physiology. 71: 692-700. PMID 16662890 DOI: 10.1104/Pp.71.3.692  0.356
2010 Hitz WD, Rhodes D, Hanson AD. Radiotracer evidence implicating phosphoryl and phosphatidyl bases as intermediates in betaine synthesis by water-stressed barley leaves. Plant Physiology. 68: 814-22. PMID 16662004 DOI: 10.1104/Pp.68.4.814  0.361
2010 Hanson AD, May AM, Grumet R, Bode J, Jamieson GC, Rhodes D. Betaine synthesis in chenopods: Localization in chloroplasts. Proceedings of the National Academy of Sciences of the United States of America. 82: 3678-82. PMID 16593569 DOI: 10.1073/Pnas.82.11.3678  0.353
2009 Long MC, Nagegowda DA, Kaminaga Y, Ho KK, Kish CM, Schnepp J, Sherman D, Weiner H, Rhodes D, Dudareva N. Involvement of snapdragon benzaldehyde dehydrogenase in benzoic acid biosynthesis. The Plant Journal : For Cell and Molecular Biology. 59: 256-65. PMID 19292760 DOI: 10.1111/J.1365-313X.2009.03864.X  0.627
2008 Lockwood AL, Filley TR, Rhodes D, Shepson PB. Foliar uptake of atmospheric organic nitrates Geophysical Research Letters. 35. DOI: 10.1029/2008Gl034714  0.302
2006 Orlova I, Marshall-Colón A, Schnepp J, Wood B, Varbanova M, Fridman E, Blakeslee JJ, Peer WA, Murphy AS, Rhodes D, Pichersky E, Dudareva N. Reduction of benzenoid synthesis in petunia flowers reveals multiple pathways to benzoic acid and enhancement in auxin transport. The Plant Cell. 18: 3458-75. PMID 17194766 DOI: 10.1105/Tpc.106.046227  0.675
2006 Kaminaga Y, Schnepp J, Peel G, Kish CM, Ben-Nissan G, Weiss D, Orlova I, Lavie O, Rhodes D, Wood K, Porterfield DM, Cooper AJ, Schloss JV, Pichersky E, Vainstein A, et al. Plant phenylacetaldehyde synthase is a bifunctional homotetrameric enzyme that catalyzes phenylalanine decarboxylation and oxidation. The Journal of Biological Chemistry. 281: 23357-66. PMID 16766535 DOI: 10.1074/Jbc.M602708200  0.638
2005 Dudareva N, Andersson S, Orlova I, Gatto N, Reichelt M, Rhodes D, Boland W, Gershenzon J. The nonmevalonate pathway supports both monoterpene and sesquiterpene formation in snapdragon flowers. Proceedings of the National Academy of Sciences of the United States of America. 102: 933-8. PMID 15630092 DOI: 10.1073/Pnas.0407360102  0.633
2004 Boatright J, Negre F, Chen X, Kish CM, Wood B, Peel G, Orlova I, Gang D, Rhodes D, Dudareva N. Understanding in vivo benzenoid metabolism in petunia petal tissue. Plant Physiology. 135: 1993-2011. PMID 15286288 DOI: 10.1104/Pp.104.045468  0.626
2004 Inan G, Zhang Q, Li P, Wang Z, Cao Z, Zhang H, Zhang C, Quist TM, Goodwin SM, Zhu J, Shi H, Damsz B, Charbaji T, Gong Q, Ma S, ... ... Rhodes D, et al. Salt cress. A halophyte and cryophyte Arabidopsis relative model system and its applicability to molecular genetic analyses of growth and development of extremophiles. Plant Physiology. 135: 1718-37. PMID 15247369 DOI: 10.1104/Pp.104.041723  0.334
2004 Goyer A, Johnson TL, Olsen LJ, Collakova E, Shachar-Hill Y, Rhodes D, Hanson AD. Characterization and metabolic function of a peroxisomal sarcosine and pipecolate oxidase from Arabidopsis. The Journal of Biological Chemistry. 279: 16947-53. PMID 14766747 DOI: 10.1074/Jbc.M400071200  0.465
2003 Rontein D, Rhodes D, Hanson AD. Evidence from engineering that decarboxylation of free serine is the major source of ethanolamine moieties in plants. Plant & Cell Physiology. 44: 1185-91. PMID 14634155 DOI: 10.1093/Pcp/Pcg144  0.441
2003 Kocsis MG, Ranocha P, Gage DA, Simon ES, Rhodes D, Peel GJ, Mellema S, Saito K, Awazuhara M, Li C, Meeley RB, Tarczynski MC, Wagner C, Hanson AD. Insertional inactivation of the methionine s-methyltransferase gene eliminates the s-methylmethionine cycle and increases the methylation ratio. Plant Physiology. 131: 1808-15. PMID 12692340 DOI: 10.1104/Pp.102.018846  0.328
2003 Yang W, Rich PJ, Axtell JD, Wood KV, Bonham CC, Ejeta G, Mickelbart MV, Rhodes D. Genotypic Variation for Glycinebetaine in Sorghum Crop Science. 43: 162-169. DOI: 10.2135/Cropsci2003.1620  0.316
2003 Mickelbart MV, Peel G, Joly RJ, Rhodes D, Ejeta G, Goldsbrough PB. Development and characterization of near-isogenic lines of sorghum segregating for glycinebetaine accumulation Physiologia Plantarum. 118: 253-261. DOI: 10.1034/J.1399-3054.2003.00106.X  0.327
2002 Morgan JA, Rhodes D. Mathematical modeling of plant metabolic pathways. Metabolic Engineering. 4: 80-9. PMID 11800577 DOI: 10.1006/Mben.2001.0211  0.423
2000 McNeil SD, Rhodes D, Russell BL, Nuccio ML, Shachar-Hill Y, Hanson AD. Metabolic modeling identifies key constraints on an engineered glycine betaine synthesis pathway in tobacco. Plant Physiology. 124: 153-62. PMID 10982430 DOI: 10.1104/Pp.124.1.153  0.412
2000 Jenks MA, Rich PJ, Rhodes D, Ashwort EN, Axtell JD, Din CK. Leaf sheath cuticular waxes on bloomless and sparse-bloom mutants of Sorghum bicolor. Phytochemistry. 54: 577-84. PMID 10963450 DOI: 10.1016/S0031-9422(00)00153-9  0.322
2000 McNeil SD, Nuccio ML, Rhodes D, Shachar-Hill Y, Hanson AD. Radiotracer and computer modeling evidence that phospho-base methylation is the main route of choline synthesis in tobacco Plant Physiology. 123: 371-380. PMID 10806254 DOI: 10.1104/Pp.123.1.371  0.413
2000 Ranocha P, Bourgis F, Ziemak MJ, Rhodes D, Gage DA, Hanson AD. Characterization and functional expression of cDNAs encoding methionine-sensitive and -insensitive homocysteine S-methyltransferases from Arabidopsis. The Journal of Biological Chemistry. 275: 15962-8. PMID 10747987 DOI: 10.1074/Jbc.M001116200  0.368
2000 Joly RJ, Jones ML, Verlinden S, Rhodes D, Woodson WR. Learning in An Inquiry-Driven Plant Physiology Laboratory Journal of Natural Resources and Life Sciences Education. 29: 31-35. DOI: 10.2134/Jnrlse.2000.0031  0.335
1998 Kocsis MG, Nolte KD, Rhodes D, Shen TL, Gage DA, Hanson AD. Dimethylsulfoniopropionate biosynthesis in Spartina alterniflora1. Evidence that S-methylmethionine and dimethylsulfoniopropylamine are intermediates. Plant Physiology. 117: 273-81. PMID 9576797 DOI: 10.1104/Pp.117.1.273  0.396
1998 Rhodes D. Drought Tolerance in Higher Plants: Genetical, Physiological and Molecular Biological Analysis Crop Science. 38: 532-533. DOI: 10.2135/Cropsci1998.0011183X003800020046X  0.336
1998 Summers PS, Nolte KD, Cooper AJ, Borgeas H, Leustek T, Rhodes D, Hanson AD. Identification and Stereospecificity of the First Three Enzymes of 3-Dimethylsulfoniopropionate Biosynthesis in a Chlorophyte Alga Plant Physiology. 116: 369-378. DOI: 10.1104/Pp.116.1.369  0.38
1997 Rhodes D, Gage DA, Cooper A, Hanson AD. S-Methylmethionine Conversion to Dimethylsulfoniopropionate: Evidence for an Unusual Transamination Reaction. Plant Physiology. 115: 1541-1548. PMID 12223879 DOI: 10.1104/Pp.115.4.1541  0.388
1997 Cánovas D, Vargas C, Iglesias-Guerra F, Csonka LN, Rhodes D, Ventosa A, Nieto JJ. Isolation and characterization of salt-sensitive mutants of the moderate halophile Halomonas elongata and cloning of the ectoine synthesis genes. The Journal of Biological Chemistry. 272: 25794-801. PMID 9325308 DOI: 10.1074/Jbc.272.41.25794  0.326
1997 Gage DA, Rhodes D, Nolte KD, Hicks WA, Leustek T, Cooper AJ, Hanson AD. A new route for synthesis of dimethylsulphoniopropionate in marine algae. Nature. 387: 891-4. PMID 9202120 DOI: 10.1038/43160  0.419
1997 Wood AJ, Saneoka H, Rhodes D, Joly RJ, Goldsbrough PB. Betaine aldehyde dehydrogenase in sorghum. Plant Physiology. 110: 1301-8. PMID 8934627 DOI: 10.1104/Pp.110.4.1301  0.406
1996 Liu D, Rhodes D, D'Urzo MP, Xu Y, Narasimhan ML, Hasegawa PM, Bressan RA, Abad L. In vivo and in vitro activity of truncated osmotin that is secreted into the extracellular matrix Plant Science. 121: 123-131. DOI: 10.1016/S0168-9452(96)04514-1  0.411
1995 Saneoka H, Nagasaka C, Hahn DT, Yang WJ, Premachandra GS, Joly RJ, Rhodes D. Salt Tolerance of Glycinebetaine-Deficient and -Containing Maize Lines Plant Physiology. 107: 631-638. DOI: 10.1104/Pp.107.2.631  0.313
1991 Lerma C, Rich PJ, Ju GC, Yang WJ, Hanson AD, Rhodes D. Betaine deficiency in maize : complementation tests and metabolic basis. Plant Physiology. 95: 1113-9. PMID 16668098 DOI: 10.1104/Pp.95.4.1113  0.378
1991 LaRosa PC, Rhodes D, Rhodes JC, Bressan RA, Csonka LN. Elevated accumulation of proline in NaCl-Adapted Tobacco Cells Is Not Due to Altered Δ1-Pyrroline-5-carboxylate reductase Plant Physiology. 96: 245-250. DOI: 10.1104/Pp.96.1.245  0.359
1990 Mayer RR, Cherry JH, Rhodes D. Effects of heat shock on amino Acid metabolism of cowpea cells. Plant Physiology. 94: 796-810. PMID 16667781 DOI: 10.1104/Pp.94.2.796  0.36
1990 Magalhães JR, Ju GC, Rich PJ, Rhodes D. Kinetics of NH(4) Assimilation in Zea mays: Preliminary Studies with a Glutamate Dehydrogenase (GDH1) Null Mutant. Plant Physiology. 94: 647-56. PMID 16667761 DOI: 10.1104/Pp.94.2.647  0.398
1989 Weretilnyk EA, Bednarek S, McCue KF, Rhodes D, Hanson AD. Comparative biochemical and immunological studies of the glycine betaine synthesis pathway in diverse families of dicotyledons. Planta. 178: 342-52. PMID 24212901 DOI: 10.1007/Bf00391862  0.375
1989 Rhodes D, Rich PJ, Brunk DG, Ju GC, Rhodes JC, Pauly MH, Hansen LA. Development of two isogenic sweet corn hybrids differing for glycinebetaine content. Plant Physiology. 91: 1112-21. PMID 16667120 DOI: 10.1104/Pp.91.3.1112  0.344
1989 Brouquisse R, Weigel P, Rhodes D, Yocum CF, Hanson AD. Evidence for a ferredoxin-dependent choline monooxygenase from spinach chloroplast stroma. Plant Physiology. 90: 322-9. PMID 16666757 DOI: 10.1104/Pp.90.1.322  0.399
1987 Larosa PC, Hasegawa PM, Rhodes D, Clithero JM, Watad AE, Bressan RA. Abscisic Acid Stimulated Osmotic Adjustment and Its Involvement in Adaptation of Tobacco Cells to NaCl. Plant Physiology. 85: 174-81. PMID 16665653 DOI: 10.1104/Pp.85.1.174  0.31
1987 Rhodes D, Rich PJ, Myers AC, Reuter CC, Jamieson GC. Determination of Betaines by Fast Atom Bombardment Mass Spectrometry : Identification of Glycine Betaine Deficient Genotypes of Zea mays. Plant Physiology. 84: 781-8. PMID 16665522 DOI: 10.1104/Pp.84.3.781  0.346
1987 Rhodes D, Hogan AL, Deal L, Jamieson GC, Haworth P. Amino Acid Metabolism of Lemna minor L. : II. Responses to Chlorsulfuron. Plant Physiology. 84: 775-80. PMID 16665521 DOI: 10.1104/Pp.84.3.775  0.416
1986 Rhodes D, Handa S, Bressan RA. Metabolic changes associated with adaptation of plant cells to water stress. Plant Physiology. 82: 890-903. PMID 16665163 DOI: 10.1104/Pp.82.4.890  0.431
1986 Rhodes D, Deal L, Haworth P, Jamieson GC, Reuter CC, Ericson MC. Amino Acid Metabolism of Lemna minor L. : I. Responses to Methionine Sulfoximine. Plant Physiology. 82: 1057-62. PMID 16665134 DOI: 10.1104/Pp.82.4.1057  0.409
1981 Rhodes D, Myers AC, Jamieson G. Gas Chromatography-Mass Spectrometry of N- Heptafluorobutyryl Isobutyl Esters of Amino Acids in the Analysis of the Kinetics of [N]H(4) Assimilation in Lemna minor L. Plant Physiology. 68: 1197-205. PMID 16662074 DOI: 10.1104/Pp.68.5.1197  0.351
1980 Rhodes D, Sims AP, Folkes BF. Pathway of ammonia assimilation in illuminated Lemna minor Phytochemistry. 19: 357-365. DOI: 10.1016/0031-9422(80)83182-7  0.313
1978 STEWART GR, RHODES D. NITROGEN METABOLISM OF HALOPHYTES III. ENZYMES OF AMMONIA ASSIMILATION New Phytologist. 80: 307-316. DOI: 10.1111/J.1469-8137.1978.Tb01563.X  0.367
1977 STEWART GR, RHODES D. A COMPARISON OF THE CHARACTERISTICS OF GLUTAMINE SYNTHETASE AND GLUTAMATE DEHYDROGENASE FROM LEMNA MINOR L. New Phytologist. 79: 257-268. DOI: 10.1111/J.1469-8137.1977.Tb02203.X  0.366
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