☰

Nika Shakiba - Publications

Affiliations: 
University of British Columbia, Vancouver, Vancouver, BC, Canada 
Area:
stem cell bioengineering, synthetic biology
Tree Info Similar researchers PubMed Report error

19/31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Maheden K, Hwang K, Egilmez I, Shakiba N. An Optimized Mouse Embryonic Stem Cell Based Reverse Poly-Transfection Technique for Rapid Exploration of Nucleic Acid Ratios. Journal of Visualized Experiments : Jove. PMID 38145374 DOI: 10.3791/65766  0.373
2023 Ilia K, Shakiba N, Bingham T, Jones RD, Kaminski MM, Aravera E, Bruno S, Palacios S, Weiss R, Collins JJ, Del Vecchio D, Schlaeger TM. Synthetic genetic circuits to uncover the OCT4 trajectories of successful reprogramming of human fibroblasts. Science Advances. 9: eadg8495. PMID 38019912 DOI: 10.1126/sciadv.adg8495  0.704
2023 Ilia K, Shakiba N, Bingham T, Jones RD, Kaminski MM, Aravera E, Bruno S, Palacios S, Weiss R, Collins JJ, Del Vecchio D, Schlaeger TM. Synthetic genetic circuits to uncover and enforce the OCT4 trajectories of successful reprogramming of human fibroblasts. Biorxiv : the Preprint Server For Biology. PMID 36747813 DOI: 10.1101/2023.01.25.525529  0.704
2022 Elbaz J, Puri MC, Faiz M, Bang KWA, Nguyen L, Makovoz B, Gertsenstein M, Hussein SMI, Zandstra PW, Briollais L, Shakiba N, Nagy A. Highly efficient reprogrammable mouse lines with integrated reporters to track the route to pluripotency. Proceedings of the National Academy of Sciences of the United States of America. 119: e2207824119. PMID 36454756 DOI: 10.1073/pnas.2207824119  0.619
2022 Maheden K, Zhang VW, Shakiba N. The Field of Cell Competition Comes of Age: Semantics and Technological Synergy. Frontiers in Cell and Developmental Biology. 10: 891569. PMID 35646896 DOI: 10.3389/fcell.2022.891569  0.374
2021 Maheden K, Bashth OS, Shakiba N. Evening the playing field: microenvironmental control over stem cell competition during fate programming. Current Opinion in Genetics & Development. 70: 66-75. PMID 34153929 DOI: 10.1016/j.gde.2021.05.008  0.464
2021 Shakiba N, Jones RD, Weiss R, Del Vecchio D. Context-aware synthetic biology by controller design: Engineering the mammalian cell. Cell Systems. 12: 561-592. PMID 34139166 DOI: 10.1016/j.cels.2021.05.011  0.651
2019 Tewary M, Dziedzicka D, Ostblom J, Prochazka L, Shakiba N, Heydari T, Aguilar-Hidalgo D, Woodford C, Piccinini E, Becerra-Alonso D, Vickers A, Louis B, Rahman N, Danovi D, Geens M, et al. High-throughput micropatterning platform reveals Nodal-dependent bisection of peri-gastrulation-associated versus preneurulation-associated fate patterning. Plos Biology. 17: e3000081. PMID 31634368 DOI: 10.1371/Journal.Pbio.3000081  0.616
2019 Zhang S, Scott EY, Singh J, Chen Y, Zhang Y, Elsayed M, Chamberlain MD, Shakiba N, Adams K, Yu S, Morshead CM, Zandstra PW, Wheeler AR. The optoelectronic microrobot: A versatile toolbox for micromanipulation. Proceedings of the National Academy of Sciences of the United States of America. PMID 31289234 DOI: 10.1073/Pnas.1903406116  0.583
2019 Shakiba N, Fahmy A, Jayakumaran G, McGibbon S, David L, Trcka D, Elbaz J, Puri MC, Nagy A, van der Kooy D, Goyal S, Wrana JL, Zandstra PW. Cell competition during reprogramming gives rise to dominant clones. Science (New York, N.Y.). PMID 30898844 DOI: 10.1126/Science.Aan0925  0.672
2018 Zhang S, Shakiba N, Chen Y, Zhang Y, Tian P, Singh J, Chamberlain MD, Satkauskas M, Flood AG, Kherani NP, Yu S, Zandstra PW, Wheeler AR. Patterned Optoelectronic Tweezers: A New Scheme for Selecting, Moving, and Storing Dielectric Particles and Cells. Small (Weinheim An Der Bergstrasse, Germany). e1803342. PMID 30307718 DOI: 10.1002/Smll.201803342  0.539
2018 Tewary M, Shakiba N, Zandstra PW. Stem cell bioengineering: building from stem cell biology. Nature Reviews. Genetics. PMID 30089805 DOI: 10.1038/S41576-018-0040-Z  0.652
2017 Tewary M, Ostblom J, Prochazka L, Zulueta-Coarasa T, Shakiba N, Fernandez-Gonzalez R, Zandstra PW. A stepwise model of Reaction-Diffusion and Positional-Information governs self-organized human peri-gastrulation-like patterning. Development (Cambridge, England). PMID 28870989 DOI: 10.1242/Dev.149658  0.572
2017 Shakiba N, Zandstra PW. Engineering cell fitness: lessons for regenerative medicine. Current Opinion in Biotechnology. 47: 7-15. PMID 28551499 DOI: 10.1016/J.Copbio.2017.05.005  0.642
2015 Hussein SM, Puri MC, Tonge PD, Benevento M, Corso AJ, Clancy JL, Mosbergen R, Li M, Lee DS, Cloonan N, Wood DL, Munoz J, Middleton R, Korn O, Patel HR, ... ... Shakiba N, et al. Corrigendum: Genome-wide characterization of the routes to pluripotency. Nature. PMID 26083747 DOI: 10.1038/Nature14606  0.492
2015 Shakiba N, White CA, Lipsitz YY, Yachie-Kinoshita A, Tonge PD, Hussein SM, Puri MC, Elbaz J, Morrissey-Scoot J, Li M, Munoz J, Benevento M, Rogers IM, Hanna JH, Heck AJ, et al. CD24 tracks divergent pluripotent states in mouse and human cells. Nature Communications. 6: 7329. PMID 26076835 DOI: 10.1038/Ncomms8329  0.654
2014 Hussein SM, Puri MC, Tonge PD, Benevento M, Corso AJ, Clancy JL, Mosbergen R, Li M, Lee DS, Cloonan N, Wood DL, Munoz J, Middleton R, Korn O, Patel HR, ... ... Shakiba N, et al. Genome-wide characterization of the routes to pluripotency. Nature. 516: 198-206. PMID 25503233 DOI: 10.1038/Nature14046  0.619
2012 Fluri DA, Tonge PD, Song H, Baptista RP, Shakiba N, Shukla S, Clarke G, Nagy A, Zandstra PW. Derivation, expansion and differentiation of induced pluripotent stem cells in continuous suspension cultures. Nature Methods. 9: 509-16. PMID 22447133 DOI: 10.1038/Nmeth.1939  0.662
2011 Chen J, Abdelgawad M, Yu L, Shakiba N, Chien W, Lu Z, Geddie WR, Jewett MAS, Sun Y. Electrodeformation for single cell mechanical characterization Journal of Micromechanics and Microengineering. 21: 054012. DOI: 10.1088/0960-1317/21/5/054012  0.382
Low-probability matches (unlikely to be authored by this person)
2022 Shakiba N, Li C, Garcia-Ojalvo J, Cho KH, Patil K, Walczak A, Liu YY, Kuehn S, Nie Q, Klein A, Deco G, Kringelbach M, Iyer-Biswas S. How can Waddington-like landscapes facilitate insights beyond developmental biology? Cell Systems. 13: 4-9. PMID 35051373 DOI: 10.1016/j.cels.2021.12.003  0.221
2022 Hwang KKL, Edholm CJ, Saucedo O, Allen LJS, Shakiba N. A Hybrid Epidemic Model to Explore Stochasticity in COVID-19 Dynamics. Bulletin of Mathematical Biology. 84: 91. PMID 35859080 DOI: 10.1007/s11538-022-01030-6  0.121
2021 Shakiba N, Edholm CJ, Emerenini BO, Murillo AL, Peace A, Saucedo O, Wang X, Allen LJS. Effects of environmental variability on superspreading transmission events in stochastic epidemic models. Infectious Disease Modelling. PMID 33754134 DOI: 10.1016/j.idm.2021.03.001  0.107
2020 Ellis BJ, Shakiba N, Adkins DE, Lester BM. Early external-environmental and internal-health predictors of risky sexual and aggressive behavior in adolescence: An integrative approach. Developmental Psychobiology. PMID 32869286 DOI: 10.1002/Dev.22029  0.101
2019 Shakiba N, Ellis BJ, Bush NR, Boyce WT. Biological sensitivity to context: A test of the hypothesized U-shaped relation between early adversity and stress responsivity. Development and Psychopathology. 1-20. PMID 31347484 DOI: 10.1017/S0954579419000518  0.075
2013 Shakiba N, Rueda L. MicroRNA identification using linear dimensionality reduction with explicit feature mapping. Bmc Proceedings. 7: S8. PMID 24564997 DOI: 10.1186/1753-6561-7-S7-S8  0.072
2019 Bachmann R, Shakiba N, Fischer M, Hackl T. The Assessment of Mixtures by Spectral Superposition. An Approach in the Field of Metabolomics. Journal of Proteome Research. PMID 31058502 DOI: 10.1021/Acs.Jproteome.8B00985  0.069
2019 DelPriore DJ, Shakiba N, Schlomer GL, Hill SE, Ellis BJ. The effects of fathers on daughters' expectations for men. Developmental Psychology. PMID 30998035 DOI: 10.1037/Dev0000741  0.067
2013 Ahmadi S, Rostamzadeh J, Khosravi D, Shariati P, Shakiba N. Association of CTLA-4 gene 49A/G polymorphism with the incidence of type 1 diabetes mellitus in the Iranian Kurdish population. Pakistan Journal of Biological Sciences : Pjbs. 16: 1929-35. PMID 24517008 DOI: 10.3923/pjbs.2013.1929.1935  0.053
2020 Conradt E, Shakiba N, Ostlund B, Terrell S, Kaliush P, Shakib JH, Crowell SE. Prenatal maternal hair cortisol concentrations are related to maternal prenatal emotion dysregulation but not neurodevelopmental or birth outcomes. Developmental Psychobiology. PMID 32002996 DOI: 10.1002/Dev.21952  0.043
2019 Ostlund BD, Vlisides-Henry RD, Crowell SE, Raby KL, Terrell S, Brown MA, Tinajero R, Shakiba N, Monk C, Shakib JH, Buchi KF, Conradt E. Intergenerational transmission of emotion dysregulation: Part II. Developmental origins of newborn neurobehavior. Development and Psychopathology. 1-14. PMID 31057128 DOI: 10.1017/S0954579419000440  0.04
2023 Yachie N, Shakiba N. Tenure time loopers. Nature Biotechnology. 41: 1375-1377. PMID 37626232 DOI: 10.1038/s41587-023-01924-3  0.017
Hide low-probability matches.