David B. Bensimon - Publications

Affiliations: 
Chemistry École normale supérieure Paris, Paris, Île-de-France, France 
Area:
Physical

81 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Ding F, Cocco S, Raj S, Manosas M, Nguyen TTT, Spiering MM, Bensimon D, Allemand JF, Croquette V. Displacement and dissociation of oligonucleotides during DNA hairpin closure under strain. Nucleic Acids Research. PMID 36478056 DOI: 10.1093/nar/gkac1113  0.782
2021 Wang Z, Maluenda J, Giraut L, Vieille T, Lefevre A, Salthouse D, Radou G, Moulinas R, Astete S, D'Avezac P, Smith G, André C, Allemand JF, Bensimon D, Croquette V, et al. Publisher Correction: Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA. Communications Biology. 4: 346. PMID 33707601 DOI: 10.1038/s42003-021-01894-9  0.729
2021 Wang Z, Maluenda J, Giraut L, Vieille T, Lefevre A, Salthouse D, Radou G, Moulinas R, Astete S, D'Avezac P, Smith G, André C, Allemand JF, Bensimon D, Croquette V, et al. Detection of genetic variation and base modifications at base-pair resolution on both DNA and RNA. Communications Biology. 4: 128. PMID 33514840 DOI: 10.1038/s42003-021-01648-7  0.77
2018 Duvernoy MC, Mora T, Ardré M, Croquette V, Bensimon D, Quilliet C, Ghigo JM, Balland M, Beloin C, Lecuyer S, Desprat N. Asymmetric adhesion of rod-shaped bacteria controls microcolony morphogenesis. Nature Communications. 9: 1120. PMID 29549338 DOI: 10.1038/S41467-018-03446-Y  0.691
2017 Hodeib S, Raj S, Manosas M, Zhang W, Bagchi D, Ducos B, Fiorini F, Kanaan J, Le Hir H, Allemand JF, Bensimon D, Croquette V. A mechanistic study of helicases with magnetic traps. Protein Science : a Publication of the Protein Society. PMID 28474797 DOI: 10.1002/Pro.3187  0.834
2016 Hodeib S, Raj S, Manosas M, Zhang W, Bagchi D, Ducos B, Allemand JF, Bensimon D, Croquette V. Single molecule studies of helicases with magnetic tweezers. Methods (San Diego, Calif.). PMID 27371121 DOI: 10.1016/J.Ymeth.2016.06.019  0.834
2016 Croquette V, Raj S, Allemand J, Bensimon D, Boulé J. Revisiting Sequencing by Hybridization at the Single Molecule Level using the Unzipping Assay Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.1021  0.717
2013 Julou T, Mora T, Guillon L, Croquette V, Schalk IJ, Bensimon D, Desprat N. Cell-cell contacts confine public goods diffusion inside Pseudomonas aeruginosa clonal microcolonies. Proceedings of the National Academy of Sciences of the United States of America. 110: 12577-82. PMID 23858453 DOI: 10.1073/Pnas.1301428110  0.676
2013 Feng Z, Zhang W, Xu J, Gauron C, Ducos B, Vriz S, Volovitch M, Jullien L, Weiss S, Bensimon D. Optical control and study of biological processes at the single-cell level in a live organism. Reports On Progress in Physics. Physical Society (Great Britain). 76: 072601. PMID 23764902 DOI: 10.1088/0034-4885/76/7/072601  0.339
2012 Julou T, Desprat N, Bensimon D, Croquette V. Monitoring microbial population dynamics at low densities Review of Scientific Instruments. 83: 74301. PMID 22852704 DOI: 10.1063/1.4729796  0.674
2012 Mandal PK, Cattiaux L, Bensimon D, Mallet JM. Monogalactopyranosides of fluorescein and fluorescein methyl ester: synthesis, enzymatic hydrolysis by biotnylated β-galactosidase, and determination of translational diffusion coefficient. Carbohydrate Research. 358: 40-6. PMID 22817995 DOI: 10.1016/J.Carres.2012.05.017  0.631
2012 Piwonski HM, Goomanovsky M, Bensimon D, Horovitz A, Haran G. Allosteric inhibition of individual enzyme molecules trapped in lipid vesicles. Proceedings of the National Academy of Sciences of the United States of America. 109: E1437-43. PMID 22562794 DOI: 10.1073/Pnas.1116670109  0.351
2012 Manosas M, Spiering MM, Ding F, Bensimon D, Allemand JF, Benkovic SJ, Croquette V. Mechanism of strand displacement synthesis by DNA replicative polymerases. Nucleic Acids Research. 40: 6174-86. PMID 22434889 DOI: 10.1093/Nar/Gks253  0.807
2012 Ding F, Manosas M, Spiering MM, Benkovic SJ, Bensimon D, Allemand JF, Croquette V. Single-molecule mechanical identification and sequencing. Nature Methods. 9: 367-72. PMID 22406857 DOI: 10.1038/Nmeth.1925  0.802
2012 Cian AD, Praly E, Ding F, Singh V, Lavelle C, Cam EL, Croquette V, Piétrement O, Bensimon D. ATP-Independent Cooperative Binding of Yeast Isw1a to Bare and Nucleosomal DNA Plos One. 7. PMID 22359636 DOI: 10.1371/Journal.Pone.0031845  0.806
2012 Lionnet T, Allemand JF, Revyakin A, Strick TR, Saleh OA, Bensimon D, Croquette V. Magnetic Trap Construction Cold Spring Harbor Protocols. 7: 133-138. PMID 22194260 DOI: 10.1101/Pdb.Prot067496  0.782
2012 Lionnet T, Allemand JF, Revyakin A, Strick TR, Saleh OA, Bensimon D, Croquette V. Single-molecule studies using magnetic traps Cold Spring Harbor Protocols. 7: 34-49. PMID 22194259 DOI: 10.1101/Pdb.Top067488  0.789
2011 Lavelle C, Praly E, Bensimon D, Cam EL, Croquette V. Nucleosome-remodelling machines and other molecular motors observed at the single-molecule level Febs Journal. 278: 3596-3607. PMID 21810177 DOI: 10.1111/J.1742-4658.2011.08280.X  0.763
2011 Chaves RC, Bensimon D, Freitas PP. Single molecule actuation and detection on a lab-on-a-chip magnetoresistive platform Journal of Applied Physics. 109: 64702. DOI: 10.1063/1.3560853  0.44
2010 Manosas M, Meglio A, Spiering MM, Ding F, Benkovic SJ, Barre FX, Saleh OA, Allemand JF, Bensimon D, Croquette V. Magnetic tweezers for the study of DNA tracking motors. Methods in Enzymology. 475: 297-320. PMID 20627163 DOI: 10.1016/S0076-6879(10)75013-8  0.762
2010 Manosas M, Xi XG, Bensimon D, Croquette V. Active and passive mechanisms of helicases Nucleic Acids Research. 38: 5518-5526. PMID 20423906 DOI: 10.1093/Nar/Gkq273  0.731
2009 Meglio A, Praly E, Ding F, Allemand J, Bensimon D, Croquette V. Single DNA/protein studies with magnetic traps Current Opinion in Structural Biology. 19: 615-622. PMID 19783425 DOI: 10.1016/J.Sbi.2009.08.005  0.801
2009 Neuman KC, Charvin G, Bensimon D, Croquette V. Mechanisms of chiral discrimination by topoisomerase IV. Proceedings of the National Academy of Sciences of the United States of America. 106: 6986-91. PMID 19359479 DOI: 10.1073/Pnas.0900574106  0.802
2009 Mosconi F, Allemand JF, Bensimon D, Croquette V. Measurement of the torque on a single stretched and twisted DNA using magnetic tweezers. Physical Review Letters. 102: 78301. PMID 19257716 DOI: 10.1103/Physrevlett.102.078301  0.78
2009 Yokota H, Han Y, Allemand J, Xi XG, Bensimon D, Croquette V, Ito Y, Harada Y. Single-molecule Visualization of Binding Modes of Helicase to DNA on PEGylated Surfaces Chemistry Letters. 38: 308-309. DOI: 10.1246/Cl.2009.308  0.761
2008 Lia G, Semsey S, Lewis DEA, Adhya S, Bensimon D, Dunlap D, Finzi L. The antiparallel loops in gal DNA Nucleic Acids Research. 36: 4204-4210. PMID 18573800 DOI: 10.1093/Nar/Gkn389  0.555
2008 Yokota H, Han Y, Allemand J, Xi X, Croquette V, Bensimon D, Harada Y. 3TP3-01 Single-molecule observation of DNA-helicase interaction(The 47th Annual Meeting of the Biophysical Society of Japan) Seibutsu Butsuri. 48. DOI: 10.2142/Biophys.48.S126_2  0.789
2008 Mosconi F, Julou T, Desprat N, Sinha DK, Allemand J, Croquette V, Bensimon D. Some nonlinear challenges in biology Nonlinearity. 21. DOI: 10.1088/0951-7715/21/8/T03  0.685
2007 Lionnet T, Spiering MM, Benkovic SJ, Bensimon D, Croquette V. Real-time observation of bacteriophage T4 gp41 helicase reveals an unwinding mechanism. Proceedings of the National Academy of Sciences of the United States of America. 104: 19790-5. PMID 18077411 DOI: 10.1073/Pnas.0709793104  0.779
2007 Yokota H, Han Y, Allemand J, Xuguang X, Vincent C, Bensimon D, Harada Y. 3P320 Single-molecule observation of DNA/helicase interaction by novel microscopy(Bioimaging. Behavior. Development and differentiation. Molecular genetics. Others,Oral Presentations) Biophysics. 47. DOI: 10.2142/Biophys.47.S283_1  0.465
2007 Allemand J, Charvin G, Croquette V, Lia G, Bensimon D. The manipulation of single biomolecules Interdisciplinary Science Reviews. 32: 149-161. DOI: 10.1179/030801807X163625  0.773
2006 Lionnet T, Dawid A, Bigot S, Barre FX, Saleh OA, Heslot F, Allemand JF, Bensimon D, Croquette V. DNA mechanics as a tool to probe helicase and translocase activity Nucleic Acids Research. 34: 4232-4244. PMID 16935884 DOI: 10.1093/Nar/Gkl451  0.814
2006 Lionnet T, Joubaud S, Lavery R, Bensimon D, Croquette V. Wringing out DNA. Physical Review Letters. 96: 178102. PMID 16712339 DOI: 10.1103/Physrevlett.96.178102  0.812
2006 Lia G, Praly E, Ferreira H, Stockdale C, Tse-Dinh YC, Dunlap D, Croquette V, Bensimon D, Owen-Hughes T. Direct observation of DNA distortion by the RSC complex. Molecular Cell. 21: 417-25. PMID 16455496 DOI: 10.1016/J.Molcel.2005.12.013  0.807
2006 Yokota H, Han Y, Allemand J, Xi X, Croquette V, Bensimon D, Harada Y. 1P556 Novel microscopy for simultaneous single molecule measurement of DNA/protein interaction(26. Single molecule biophysics,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) Seibutsu Butsuri. 46. DOI: 10.2142/Biophys.46.S285_4  0.775
2005 Neuman KC, Saleh OA, Lionnet T, Lia G, Allemand JF, Bensimon D, Croquette V. Statistical determination of the step size of molecular motors. Journal of Physics. Condensed Matter : An Institute of Physics Journal. 17: S3811-20. PMID 21690726 DOI: 10.1088/0953-8984/17/47/012  0.712
2005 Saleh OA, Allemand JF, Croquette V, Bensimon D. Single-molecule manipulation measurements of DMA transport proteins Chemphyschem. 6: 813-818. PMID 15884063 DOI: 10.1002/Cphc.200400635  0.777
2005 Charvin G, Strick TR, Bensimon D, Croquette V. Tracking Topoisomerase Activity at the Single-Molecule Level Annual Review of Biophysics and Biomolecular Structure. 34: 201-219. PMID 15869388 DOI: 10.1146/Annurev.Biophys.34.040204.144433  0.812
2005 Charvin G, Strick TR, Bensimon D, Croquette V. Topoisomerase IV bends and overtwists DNA upon binding Biophysical Journal. 89: 384-392. PMID 15863484 DOI: 10.1529/Biophysj.105.060202  0.793
2005 Charvin G, Vologodskii A, Bensimon D, Croquette V. Braiding DNA: Experiments, simulations, and models Biophysical Journal. 88: 4124-4136. PMID 15778439 DOI: 10.1529/Biophysj.104.056945  0.815
2004 Dessinges M, Lionnet T, Xi XG, Bensimon D, Croquette V. Single-molecule assay reveals strand switching and enhanced processivity of UvrD Proceedings of the National Academy of Sciences of the United States of America. 101: 6439-6444. PMID 15079074 DOI: 10.1073/Pnas.0306713101  0.817
2004 Yokota H, Han Y, Allemand J, Xi X, Croquette V, Bensimon D, Harada Y. 1P327 Development of a novel mechano-fluorescence microscope for measurement of DNA/protein interaction at single molecule level II Seibutsu Butsuri. 44. DOI: 10.2142/Biophys.44.S181_3  0.767
2004 Charvin G, Allemand JF, Strick TR, Bensimon D, Croquette V. Twisting DNA: single molecule studies Contemporary Physics. 45: 383-403. DOI: 10.1080/00107510410001697279  0.825
2003 Lia G, Bensimon D, Croquette V, Allemand JF, Dunlap D, Lewis DEA, Adhya S, Finzi L. Supercoiling and denaturation in Gal repressor/heat unstable nucleoid protein (HU)-mediated DNA looping Proceedings of the National Academy of Sciences of the United States of America. 100: 11373-11377. PMID 14500788 DOI: 10.1073/Pnas.2034851100  0.814
2003 Charvin G, Bensimon D, Croquette V. Single-molecule study of DNA unlinking by eukaryotic and prokaryotic type-II topoisomerases. Proceedings of the National Academy of Sciences of the United States of America. 100: 9820-9825. PMID 12902541 DOI: 10.1073/Pnas.1631550100  0.775
2003 Dekker NH, Viard T, Bouthier de La Tour C, Bensimon D, Croquette V. [Enzymes that relax supercoiled DNA]. MéDecine Sciences : M/S. 19: 398-400. PMID 12836207 DOI: 10.1051/Medsci/2003194398  0.789
2003 Allemand J, Bensimon D, Croquette V. Stretching DNA and RNA to probe their interactions with proteins. Current Opinion in Structural Biology. 13: 266-274. PMID 12831877 DOI: 10.1016/S0959-440X(03)00067-8  0.81
2003 Dekker NH, Viard T, Bouthier De La Tour C, Duguet M, Bensimon D, Croquette V. Thermophilic topoisomerase I on a single DNA molecule Journal of Molecular Biology. 329: 271-282. PMID 12758075 DOI: 10.1016/S0022-2836(03)00320-6  0.826
2003 Strick TR, Dessinges MN, Charvin G, Dekker NH, Allemand JF, Bensimon D, Croquette V. Stretching of macromolecules and proteins Reports On Progress in Physics. 66: 1-45. DOI: 10.1088/0034-4885/66/1/201  0.745
2002 Dessinges M-, Maier B, Zhang Y, Peliti M, Bensimon D, Croquette V. Stretching single stranded DNA, a model polyelectrolyte. Physical Review Letters. 89: 248102. PMID 12484983 DOI: 10.1103/Physrevlett.89.248102  0.768
2002 Dekker NH, Rybenkov VV, Duguet M, Crisona NJ, Cozzarelli NR, Bensimon D, Croquette V. The mechanism of type IA topoisomerases. Proceedings of the National Academy of Sciences of the United States of America. 99: 12126-31. PMID 12167668 DOI: 10.1073/Pnas.132378799  0.756
2002 Lavery R, Lebrun A, Allemand JF, Bensimon D, Croquette V. Structure and mechanics of single biomolecules: Experiment and simulation Journal of Physics Condensed Matter. 14: R383-R414. DOI: 10.1088/0953-8984/14/14/202  0.732
2002 Bensimon D, Croquette V. Biophysique à l'échelle de la molécule unique/Single molecule biophysicsForeword Comptes Rendus Physique. 3. DOI: 10.1016/S1631-0705(02)01348-8  0.302
2002 Strick TR, Charvin G, Dekker NH, Allemand JF, Bensimon D, Croquette V. Tracking enzymatic steps of DNA topoisomerases using single-molecule micromanipulation Comptes Rendus Physique. 3: 595-618. DOI: 10.1016/S1631-0705(02)01347-6  0.807
2002 Charvin G, Bensimon D, Croquette V. On the Relation Between Noise Spectra and the Distribution of Time Between Steps for Single Molecular Motors Single Molecules. 3: 43-48. DOI: 10.1002/1438-5171(200204)3:1<43::Aid-Simo43>3.0.Co;2-S  0.696
2001 Strick TR, Allemand J, Croquette V, Bensimon D. Credit clarified for biomolecules work Physics Today. 54: 78-78. DOI: 10.1063/1.1445570  0.656
2001 Strick T, Allemand J, Croquette V, Bensimon D. The Manipulation of Single Biomolecules Physics Today. 54: 46-51. DOI: 10.1063/1.1420553  0.771
2000 Strick T, Allemand J, Croquette V, Bensimon D. Twisting and stretching single DNA molecules. Progress in Biophysics & Molecular Biology. 74: 115-140. PMID 11106809 DOI: 10.1016/S0079-6107(00)00018-3  0.819
2000 Crisona NJ, Strick TR, Bensimon D, Croquette V, Cozzarelli NR. Preferential relaxation of positively supercoiled DNA by E. coli topoisomerase IV in single-molecule and ensemble measurements. Genes & Development. 14: 2881-92. PMID 11090135 DOI: 10.1101/Gad.838900  0.816
2000 Maier B, Bensimon D, Croquette V. Replication by a single DNA polymerase of a stretched single-stranded DNA. Proceedings of the National Academy of Sciences of the United States of America. 97: 12002-12007. PMID 11050232 DOI: 10.1073/Pnas.97.22.12002  0.815
2000 Strick TR, Allemand J-, Bensimon D, Croquette V. Stress-induced structural transitions in DNA and proteins. Annual Review of Biophysics and Biomolecular Structure. 29: 523-543. PMID 10940258 DOI: 10.1146/Annurev.Biophys.29.1.523  0.771
2000 Strick TR, Croquette V, Bensimon D. Single-molecule analysis of DNA uncoiling by a type II topoisomerase. Nature. 404: 901-904. PMID 10786800 DOI: 10.1038/35009144  0.824
1999 Bensimon D. Fast combinatorial cartography by FISH on combed genomic DNA Genetica. 106: 93-94. PMID 10710714 DOI: 10.1023/A:1003780928744  0.431
1999 Strick TR, Bensimon D, Croquette V. Micro-Mechanical Measurement of the Torsional Modulus of DNA Genetica. 106: 57-62. PMID 10710710 DOI: 10.1023/A:1003772626927  0.746
1999 Strick T, Allemand JF, Bensimon D, Lavery R, Croquette V. Phase coexistence in a single DNA molecule Physica a: Statistical Mechanics and Its Applications. 263: 392-404. DOI: 10.1016/S0378-4371(98)00540-8  0.785
1998 Allemand JF, Bensimon D, Lavery R, Croquette V. Stretched and overwound DNA forms a Pauling-like structure with exposed bases Proceedings of the National Academy of Sciences of the United States of America. 95: 14152-14157. PMID 9826669 DOI: 10.1073/Pnas.95.24.14152  0.797
1998 Strick TR, Croquette V, Bensimon D. Homologous pairing in stretched supercoiled DNA Proceedings of the National Academy of Sciences of the United States of America. 95: 10579-10583. PMID 9724746 DOI: 10.1073/Pnas.95.18.10579  0.82
1998 Strick TR, Allemand J-, Bensimon D, Croquette V. Behavior of Supercoiled DNA Biophysical Journal. 74: 2016-2028. PMID 9545060 DOI: 10.1016/S0006-3495(98)77908-1  0.795
1998 Strick TR, Allemand J-, Croquette V, Bensimon D. Physical Approaches to the Study of DNA Journal of Statistical Physics. 93: 647-672. DOI: 10.1023/B:Joss.0000033247.51868.Be  0.814
1997 Allemand JF, Bensimon D, Jullien L, Bensimon A, Croquette V. pH-dependent specific binding and combing of DNA. Biophysical Journal. 73: 2064-70. PMID 9336201 DOI: 10.1016/S0006-3495(97)78236-5  0.764
1996 Bensimon D. Force: a new structural control parameter? Structure. 4: 885-889. PMID 8805575 DOI: 10.1016/S0969-2126(96)00095-0  0.346
1996 Strick TR, Allemand J-, Bensimon D, Bensimon A, Croquette V. The Elasticity of a Single Supercoiled DNA Molecule Science. 271: 1835-1837. PMID 8596951 DOI: 10.1126/Science.271.5257.1835  0.822
1995 Bensimon D, Simon AJ, Croquette V, Bensimon A. Stretching DNA with a receding meniscus: Experiments and models. Physical Review Letters. 74: 4754-4757. PMID 10058590 DOI: 10.1103/Physrevlett.74.4754  0.506
1994 Bensimon A, Simon A, Chiffaudel A, Croquette V, Heslot F, Bensimon D. Alignment and sensitive detection of DNA by a moving interface Science. 265: 2096-2098. PMID 7522347 DOI: 10.1126/Science.7522347  0.808
1992 Janiaud B, Bensimon D, Croquette V, Richter H, Kramer L, Pumir A. The Eckhaus instability for traveling waves Physica D: Nonlinear Phenomena. 55: 269-286. DOI: 10.1016/0167-2789(92)90060-Z  0.663
1990 Bensimon D, Kolodner P, Surko CM, Williams H, Croquette V. Competing and coexisting dynamical states of travelling-wave convection in an annulus Journal of Fluid Mechanics. 217: 441-467. DOI: 10.1017/S0022112090000799  0.664
1987 BENSIMON D, KADANOFF LP. The Breakdown of KAM Trajectories Annals of the New York Academy of Sciences. 497: 110-116. DOI: 10.1111/J.1749-6632.1987.Tb48716.X  0.487
1986 Bensimon D, Jensen MH, Kadanoff LP. Renormalization-group analysis of the global structure of the period-doubling attractor. Physical Review. A. 33: 3622-3624. PMID 9897101 DOI: 10.1103/Physreva.33.3622  0.512
1986 Bensimon D, Kadanoff LP, Liang S, Shraiman BI, Tang C. Viscous flows in two dimensions Reviews of Modern Physics. 58: 977-999. DOI: 10.1103/Revmodphys.58.977  0.592
1984 Bensimon D, Kadanoff LP. Extended chaos and disappearance of KAM trajectories Physica D: Nonlinear Phenomena. 13: 82-89. DOI: 10.1016/0167-2789(84)90271-9  0.5
1983 Domany E, Alexander S, Bensimon D, Kadanoff LP. Solutions to the Schrödinger equation on some fractal lattices Physical Review B. 28: 3110-3123. DOI: 10.1103/Physrevb.28.3110  0.49
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