| Year |
Citation |
Score |
| 2024 |
Chen Y, Ma X, Hack JH, Zhang S, Peng A, Dombrowski JP, Voth GA, Tokmakoff A, Kung MC, Kung HH. Molecular Tuning of Reactivity of Zeolite Protons in HZSM-5. Journal of the American Chemical Society. PMID 38574341 DOI: 10.1021/jacs.3c12680 |
0.395 |
|
| 2024 |
Guha A, Whaley-Mayda L, Lee SY, Tokmakoff A. Molecular factors determining brightness in fluorescence-encoded infrared vibrational spectroscopy. The Journal of Chemical Physics. 160. PMID 38456530 DOI: 10.1063/5.0190231 |
0.315 |
|
| 2023 |
Hack JH, Chen Y, Lewis NHC, Kung HH, Tokmakoff A. Strong H-bonding from Zeolite Bro̷nsted Acid Site to Water: Origin of the Broad IR Doublet. The Journal of Physical Chemistry. B. PMID 38109274 DOI: 10.1021/acs.jpcb.3c06819 |
0.391 |
|
| 2023 |
Bodine M, Rozyyev V, Elam JW, Tokmakoff A, Lewis NHC. Vibrational Probe at the Electrochemical Interface: Dependence on Plasmon Coupling and Potential of the Lineshape in Two-Dimensional Infrared Spectroscopy. The Journal of Physical Chemistry Letters. 11092-11099. PMID 38051916 DOI: 10.1021/acs.jpclett.3c02987 |
0.373 |
|
| 2023 |
Whaley-Mayda L, Guha A, Tokmakoff A. Multimode vibrational dynamics and orientational effects in fluorescence-encoded infrared spectroscopy. I. Response function theory. The Journal of Chemical Physics. 159. PMID 37966137 DOI: 10.1063/5.0171939 |
0.385 |
|
| 2023 |
Whaley-Mayda L, Guha A, Tokmakoff A. Multimode vibrational dynamics and orientational effects in fluorescence-encoded infrared spectroscopy. II. Analysis of early-time signals. The Journal of Chemical Physics. 159. PMID 37966136 DOI: 10.1063/5.0171946 |
0.354 |
|
| 2022 |
Lewis NHC, Dereka B, Zhang Y, Maginn EJ, Tokmakoff A. From Networked to Isolated: Observing Water Hydrogen Bonds in Concentrated Electrolytes with Two-Dimensional Infrared Spectroscopy. The Journal of Physical Chemistry. B. PMID 35829623 DOI: 10.1021/acs.jpcb.2c03341 |
0.359 |
|
| 2021 |
Dereka B, Lewis NHC, Keim JH, Snyder SA, Tokmakoff A. Characterization of Acetonitrile Isotopologues as Vibrational Probes of Electrolytes. The Journal of Physical Chemistry. B. PMID 34962409 DOI: 10.1021/acs.jpcb.1c09572 |
0.374 |
|
| 2021 |
Baiz CR, Błasiak B, Bredenbeck J, Cho M, Choi JH, Corcelli SA, Dijkstra AG, Feng CJ, Garrett-Roe S, Ge NH, Hanson-Heine MWD, Hirst JD, Jansen TLC, Kwac K, Kubarych KJ, ... ... Tokmakoff A, et al. Correction to Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction. Chemical Reviews. PMID 34709802 DOI: 10.1021/acs.chemrev.1c00758 |
0.82 |
|
| 2021 |
Barry E, Burns R, Chen W, De Hoe GX, De Oca JMM, de Pablo JJ, Dombrowski J, Elam JW, Felts AM, Galli G, Hack J, He Q, He X, Hoenig E, Iscen A, ... ... Tokmakoff A, et al. Advanced Materials for Energy-Water Systems: The Central Role of Water/Solid Interfaces in Adsorption, Reactivity, and Transport. Chemical Reviews. PMID 34213328 DOI: 10.1021/acs.chemrev.1c00069 |
0.38 |
|
| 2021 |
Hack JH, Dombrowski JP, Ma X, Chen Y, Lewis NHC, Carpenter WB, Li C, Voth GA, Kung HH, Tokmakoff A. Structural Characterization of Protonated Water Clusters Confined in HZSM-5 Zeolites. Journal of the American Chemical Society. PMID 34210123 DOI: 10.1021/jacs.1c03205 |
0.514 |
|
| 2021 |
Whaley-Mayda L, Guha A, Penwell SB, Tokmakoff A. Fluorescence-Encoded Infrared Vibrational Spectroscopy with Single-Molecule Sensitivity. Journal of the American Chemical Society. PMID 33596055 DOI: 10.1021/jacs.1c00542 |
0.349 |
|
| 2020 |
Carpenter WB, Yu Q, Hack JH, Dereka B, Bowman JM, Tokmakoff A. Decoding the 2D IR spectrum of the aqueous proton with high-level VSCF/VCI calculations. The Journal of Chemical Physics. 153: 124506. PMID 33003749 DOI: 10.1063/5.0020279 |
0.438 |
|
| 2020 |
Ashwood B, Lewis NHC, Sanstead PJ, Tokmakoff A. Temperature-Jump 2D IR Spectroscopy with Intensity-Modulated CW Optical Heating. The Journal of Physical Chemistry. B. PMID 32902979 DOI: 10.1021/Acs.Jpcb.0C07177 |
0.381 |
|
| 2020 |
Lewis NHC, Iscen A, Felts A, Dereka B, Schatz GC, Tokmakoff A. Vibrational Probe of Aqueous Electrolytes - The Field is Not Enough. The Journal of Physical Chemistry. B. PMID 32687351 DOI: 10.1021/Acs.Jpcb.0C05510 |
0.435 |
|
| 2020 |
Baiz CR, Błasiak B, Bredenbeck J, Cho M, Choi JH, Corcelli SA, Dijkstra AG, Feng CJ, Garrett-Roe S, Ge NH, Hanson-Heine MWD, Hirst JD, Jansen TLC, Kwac K, Kubarych KJ, ... ... Tokmakoff A, et al. Vibrational Spectroscopic Map, Vibrational Spectroscopy, and Intermolecular Interaction. Chemical Reviews. PMID 32598850 DOI: 10.1021/Acs.Chemrev.9B00813 |
0.832 |
|
| 2020 |
Antoszewski A, Feng CJ, Vani BP, Thiede EH, Hong L, Weare J, Tokmakoff A, Dinner AR. Insulin Dissociates by Diverse Mechanisms of Coupled Unfolding and Unbinding. The Journal of Physical Chemistry. B. PMID 32515958 DOI: 10.1021/Acs.Jpcb.0C03521 |
0.313 |
|
| 2020 |
Zhang XX, Tokmakoff A. Revealing the Dynamical Role of Co-Solvents in the Coupled Folding and Dimerization of Insulin. The Journal of Physical Chemistry Letters. PMID 32401513 DOI: 10.1021/Acs.Jpclett.0C00982 |
0.36 |
|
| 2020 |
Sanstead PJ, Ashwood B, Dai Q, He C, Tokmakoff A. Oxidized Derivatives of 5-Methylcytosine Alter the Stability and Dehybridization Dynamics of Duplex DNA. The Journal of Physical Chemistry. B. PMID 31986043 DOI: 10.1021/Acs.Jpcb.9B11511 |
0.317 |
|
| 2020 |
Lewis NHC, Zhang Y, Dereka B, Carino EV, Maginn EJ, Tokmakoff A. Signatures of Ion Pairing and Aggregation in the Vibrational Spectroscopy of Super-Concentrated Aqueous Lithium Bistriflimide Solutions The Journal of Physical Chemistry C. 124: 3470-3481. DOI: 10.1021/Acs.Jpcc.9B10477 |
0.323 |
|
| 2019 |
Ashwood B, Sanstead PJ, Dai Q, He C, Tokmakoff A. 5-Carboxylcytosine and Cytosine Protonation Distinctly Alter the Stability and Dehybridization Dynamics of the DNA Duplex. The Journal of Physical Chemistry. B. PMID 31873021 DOI: 10.1021/Acs.Jpcb.9B11510 |
0.333 |
|
| 2019 |
Yu Q, Carpenter WB, Lewis NHC, Tokmakoff A, Bowman JM. High-Level VSCF/VCI Calculations Decode the Vibrational Spectrum of the Aqueous Proton. The Journal of Physical Chemistry. B. PMID 31361141 DOI: 10.1021/Acs.Jpcb.9B05723 |
0.503 |
|
| 2019 |
Carpenter WB, Lewis NHC, Fournier JA, Tokmakoff A. Entropic barriers in the kinetics of aqueous proton transfer. The Journal of Chemical Physics. 151: 034501. PMID 31325917 DOI: 10.1063/1.5108907 |
0.696 |
|
| 2019 |
Whaley-Mayda L, Penwell SB, Tokmakoff A. Fluorescence-Encoded Infrared Spectroscopy: Ultrafast Vibrational Spectroscopy on Small Ensembles of Molecules in Solution. The Journal of Physical Chemistry Letters. 1967-1972. PMID 30942587 DOI: 10.1021/Acs.Jpclett.9B00748 |
0.441 |
|
| 2019 |
Menssen RJ, Tokmakoff A. Length-Dependent Melting Kinetics of Short DNA Oligonucleotides Using Temperature-Jump IR Spectroscopy. The Journal of Physical Chemistry. B. PMID 30614693 DOI: 10.1021/Acs.Jpcb.8B09487 |
0.334 |
|
| 2018 |
Lewis NHC, Fournier JA, Carpenter WB, Tokmakoff A. Direct Observation of Ion Pairing in Aqueous Nitric Acid Using 2D Infrared Spectroscopy. The Journal of Physical Chemistry. B. PMID 30521750 DOI: 10.1021/Acs.Jpcb.8B10019 |
0.679 |
|
| 2018 |
Fournier JA, Carpenter WB, Lewis NHC, Tokmakoff A. Broadband 2D IR spectroscopy reveals dominant asymmetric HO proton hydration structures in acid solutions. Nature Chemistry. PMID 30061612 DOI: 10.1038/S41557-018-0091-Y |
0.726 |
|
| 2018 |
Feng CJ, Dhayalan B, Tokmakoff A. Refinement of Peptide Conformational Ensembles by 2D IR Spectroscopy: Application to Ala‒Ala‒Ala. Biophysical Journal. 114: 2820-2832. PMID 29925019 DOI: 10.1016/J.Bpj.2018.05.003 |
0.489 |
|
| 2018 |
Sanstead PJ, Tokmakoff A. Direct Observation of Activated Kinetics and Downhill Dynamics in DNA Dehybridization. The Journal of Physical Chemistry. B. PMID 29504399 DOI: 10.1021/Acs.Jpcb.8B01445 |
0.38 |
|
| 2018 |
Carpenter WB, Fournier JA, Lewis NHC, Tokmakoff A. Picosecond Proton Transfer Kinetics in Water Revealed with Ultrafast IR Spectroscopy. The Journal of Physical Chemistry. B. PMID 29452488 DOI: 10.1021/Acs.Jpcb.8B00118 |
0.782 |
|
| 2018 |
Stevenson P, Tokmakoff A. Infrared insights into the effect of cholesterol on lipid membranes Chemical Physics. 512: 146-153. DOI: 10.1016/J.Chemphys.2017.12.012 |
0.601 |
|
| 2018 |
Feng C, Dhayalan B, Zhang X, Tokmakoff A. Refining Peptide Conformational Landscape by Amide I Infrared Spectroscopy and MD Simulations Biophysical Journal. 114: 387a. DOI: 10.1016/J.Bpj.2017.11.2137 |
0.326 |
|
| 2017 |
Mastron JN, Tokmakoff A. Fourier Transform Fluorescence-Encoded Infrared Spectroscopy. The Journal of Physical Chemistry. A. PMID 29251500 DOI: 10.1021/Acs.Jpca.7B10305 |
0.838 |
|
| 2017 |
Stevenson P, Tokmakoff A. Time-resolved measurements of an ion channel conformational change driven by a membrane phase transition. Proceedings of the National Academy of Sciences of the United States of America. PMID 28973859 DOI: 10.1073/Pnas.1708070114 |
0.559 |
|
| 2017 |
Feng CJ, Tokmakoff A. The dynamics of peptide-water interactions in dialanine: An ultrafast amide I 2D IR and computational spectroscopy study. The Journal of Chemical Physics. 147: 085101. PMID 28863528 DOI: 10.1063/1.4991871 |
0.516 |
|
| 2017 |
Carpenter WB, Fournier JA, Biswas R, Voth GA, Tokmakoff A. Delocalization and stretch-bend mixing of the HOH bend in liquid water. The Journal of Chemical Physics. 147: 084503. PMID 28863511 DOI: 10.1063/1.4987153 |
0.852 |
|
| 2017 |
Ganim Z, Jones KC, Tokmakoff A. Correction: Insulin dimer dissociation and unfolding revealed by amide I two-dimensional infrared spectroscopy. Physical Chemistry Chemical Physics : Pccp. PMID 28678231 DOI: 10.1039/C7Cp90151H |
0.718 |
|
| 2017 |
Biswas R, Carpenter W, Fournier JA, Voth GA, Tokmakoff A. IR spectral assignments for the hydrated excess proton in liquid water. The Journal of Chemical Physics. 146: 154507. PMID 28433032 DOI: 10.1063/1.4980121 |
0.835 |
|
| 2017 |
Stevenson P, Tokmakoff A. Ultrafast Fluctuations of High Amplitude Electric Fields in Lipid Membranes. Journal of the American Chemical Society. PMID 28277665 DOI: 10.1021/Jacs.6B12412 |
0.615 |
|
| 2017 |
Stevenson P, Tokmakoff A. Multiscale Dynamics of Lipid Membranes from Femtoseconds to Milliseconds: Insights from Time-Resolved Infrared Spectroscopy Biophysical Journal. 112: 219a-220a. DOI: 10.1016/J.Bpj.2016.11.1212 |
0.62 |
|
| 2016 |
Mastron JN, Tokmakoff A. Two-Photon-Excited Fluorescence-Encoded Infrared Spectroscopy. The Journal of Physical Chemistry. A. PMID 27802385 DOI: 10.1021/Acs.Jpca.6B09158 |
0.822 |
|
| 2016 |
Biswas R, Carpenter W, Voth GA, Tokmakoff A. Molecular modeling and assignment of IR spectra of the hydrated excess proton in isotopically dilute water. The Journal of Chemical Physics. 145: 154504. PMID 27782492 DOI: 10.1063/1.4964723 |
0.749 |
|
| 2016 |
Reppert M, Roy AR, Tempkin JO, Dinner AR, Tokmakoff A. Refining Disordered Peptide Ensembles with Computational Amide I Spectroscopy: Application to Elastin-Like Peptides. The Journal of Physical Chemistry. B. PMID 27736076 DOI: 10.1021/Acs.Jpcb.6B08678 |
0.756 |
|
| 2016 |
De Marco L, Fournier JA, Thämer M, Carpenter W, Tokmakoff A. Anharmonic exciton dynamics and energy dissipation in liquid water from two-dimensional infrared spectroscopy. The Journal of Chemical Physics. 145: 094501. PMID 27608998 DOI: 10.1063/1.4961752 |
0.85 |
|
| 2016 |
Sanstead PJ, Stevenson P, Tokmakoff A. Sequence dependent mechanism of DNA oligonucleotide dehybridization resolved through infrared spectroscopy. Journal of the American Chemical Society. PMID 27519555 DOI: 10.1021/Jacs.6B05854 |
0.595 |
|
| 2016 |
Fournier JA, Carpenter W, de Marco L, Tokmakoff A. The Interplay of Ion-Water and Water-Water Interactions within the Hydration Shells of Nitrate and Carbonate Directly Probed with 2D IR Spectroscopy. Journal of the American Chemical Society. PMID 27404015 DOI: 10.1021/Jacs.6B05122 |
0.713 |
|
| 2016 |
Zhang XX, Jones KC, Fitzpatrick A, Peng CS, Feng CJ, Baiz CR, Tokmakoff A. Studying Protein-Protein Binding Through T-Jump Induced Dissociation: Transient 2D IR Spectroscopy of Insulin Dimer. The Journal of Physical Chemistry. B. PMID 27203447 DOI: 10.1021/Acs.Jpcb.6B03246 |
0.741 |
|
| 2016 |
De Marco L, Carpenter W, Liu H, Biswas R, Bowman JM, Tokmakoff A. Differences in the Vibrational Dynamics of H2O and D2O: Observation of Symmetric and Antisymmetric Stretching Vibrations in Heavy Water. The Journal of Physical Chemistry Letters. PMID 27115316 DOI: 10.1021/Acs.Jpclett.6B00668 |
0.725 |
|
| 2016 |
Reppert M, Tokmakoff A. Computational Amide I 2D IR Spectroscopy as a Probe of Protein Structure and Dynamics. Annual Review of Physical Chemistry. PMID 27023758 DOI: 10.1146/Annurev-Physchem-040215-112055 |
0.786 |
|
| 2015 |
Dhayalan B, Fitzpatrick A, Mandal K, Whittaker J, Weiss M, Tokmakoff A, Kent S. Efficient Total Chemical Synthesis of 13C=18O Isotopomers of Human Insulin for Isotope-Edited FTIR. Chembiochem : a European Journal of Chemical Biology. PMID 26715336 DOI: 10.1002/Cbic.201500601 |
0.351 |
|
| 2015 |
Dai Q, Sanstead PJ, Peng CS, Han D, He C, Tokmakoff A. Weakened N3 hydrogen bonding by 5 formylcytosine and 5 carboxylcytosine reduces their base-pairing stability. Acs Chemical Biology. PMID 26641274 DOI: 10.1021/Acschembio.5B00762 |
0.52 |
|
| 2015 |
Mandal A, Tokmakoff A. Vibrational dynamics of aqueous hydroxide solutions probed using broadband 2DIR spectroscopy. The Journal of Chemical Physics. 143: 194501. PMID 26590536 DOI: 10.1063/1.4935174 |
0.816 |
|
| 2015 |
Biswas R, Tse YS, Tokmakoff A, Voth GA. Role of Pre-Solvation and Anharmonicity in Aqueous Phase Hydrated Proton Solvation and Transport. The Journal of Physical Chemistry. B. PMID 26575795 DOI: 10.1021/Acs.Jpcb.5B09466 |
0.7 |
|
| 2015 |
Thämer M, De Marco L, Ramasesha K, Mandal A, Tokmakoff A. Ultrafast 2D IR spectroscopy of the excess proton in liquid water. Science (New York, N.Y.). 350: 78-82. PMID 26430117 DOI: 10.1126/Science.Aab3908 |
0.83 |
|
| 2015 |
Reppert M, Tokmakoff A. Communication: Quantitative multi-site frequency maps for amide I vibrational spectroscopy. The Journal of Chemical Physics. 143: 061102. PMID 26277120 DOI: 10.1063/1.4928637 |
0.717 |
|
| 2015 |
Stevenson P, Tokmakoff A. Distinguishing gramicidin D conformers through two-dimensional infrared spectroscopy of vibrational excitons. The Journal of Chemical Physics. 142: 212424. PMID 26049444 DOI: 10.1063/1.4917321 |
0.666 |
|
| 2015 |
Baiz CR, Tokmakoff A. Structural disorder of folded proteins: isotope-edited 2D IR spectroscopy and Markov state modeling. Biophysical Journal. 108: 1747-57. PMID 25863066 DOI: 10.1016/J.Bpj.2014.12.061 |
0.675 |
|
| 2015 |
Stevenson P, Götz C, Baiz CR, Akerboom J, Tokmakoff A, Vaziri A. Visualizing KcsA Conformational Changes upon Ion Binding by Infrared Spectroscopy and Atomistic Modeling. The Journal of Physical Chemistry. B. 119: 5824-31. PMID 25861001 DOI: 10.1021/Acs.Jpcb.5B02223 |
0.711 |
|
| 2015 |
Reppert M, Roy AR, Tokmakoff A. Isotope-enriched protein standards for computational amide I spectroscopy. The Journal of Chemical Physics. 142: 125104. PMID 25833611 DOI: 10.1063/1.4915271 |
0.73 |
|
| 2015 |
Peng CS, Fedeles BI, Singh V, Li D, Amariuta T, Essigmann JM, Tokmakoff A. Two-dimensional IR spectroscopy of the anti-HIV agent KP1212 reveals protonated and neutral tautomers that influence pH-dependent mutagenicity. Proceedings of the National Academy of Sciences of the United States of America. 112: 3229-34. PMID 25733867 DOI: 10.1073/Pnas.1415974112 |
0.568 |
|
| 2014 |
Hummer G, Tokmakoff A. Preface: special topic on biological water. The Journal of Chemical Physics. 141: 22D101. PMID 25494771 DOI: 10.1063/1.4901337 |
0.319 |
|
| 2014 |
Eisele DM, Arias DH, Fu X, Bloemsma EA, Steiner CP, Jensen RA, Rebentrost P, Eisele H, Tokmakoff A, Lloyd S, Nelson KA, Nicastro D, Knoester J, Bawendi MG. Robust excitons inhabit soft supramolecular nanotubes. Proceedings of the National Academy of Sciences of the United States of America. 111: E3367-75. PMID 25092336 DOI: 10.1073/Pnas.1408342111 |
0.444 |
|
| 2014 |
Baiz CR, Schach D, Tokmakoff A. Ultrafast 2D IR microscopy. Optics Express. 22: 18724-35. PMID 25089490 DOI: 10.1364/Oe.22.018724 |
0.7 |
|
| 2014 |
Li D, Fedeles BI, Singh V, Peng CS, Silvestre KJ, Simi AK, Simpson JH, Tokmakoff A, Essigmann JM. Tautomerism provides a molecular explanation for the mutagenic properties of the anti-HIV nucleoside 5-aza-5,6-dihydro-2'-deoxycytidine. Proceedings of the National Academy of Sciences of the United States of America. 111: E3252-9. PMID 25071207 DOI: 10.1073/Pnas.1405635111 |
0.529 |
|
| 2014 |
De Marco L, Thämer M, Reppert M, Tokmakoff A. Direct observation of intermolecular interactions mediated by hydrogen bonding. The Journal of Chemical Physics. 141: 034502. PMID 25053321 DOI: 10.1063/1.4885145 |
0.842 |
|
| 2014 |
Mandal A, Ramasesha K, De Marco L, Tokmakoff A. Collective vibrations of water-solvated hydroxide ions investigated with broadband 2DIR spectroscopy. The Journal of Chemical Physics. 140: 204508. PMID 24880302 DOI: 10.1063/1.4878490 |
0.841 |
|
| 2014 |
Roberts ST, Mandal A, Tokmakoff A. Local and collective reaction coordinates in the transport of the aqueous hydroxide ion. The Journal of Physical Chemistry. B. 118: 8062-9. PMID 24666116 DOI: 10.1021/Jp501145P |
0.801 |
|
| 2014 |
Baiz CR, Lin YS, Peng CS, Beauchamp KA, Voelz VA, Pande VS, Tokmakoff A. A molecular interpretation of 2D IR protein folding experiments with Markov state models. Biophysical Journal. 106: 1359-70. PMID 24655511 DOI: 10.1016/J.Bpj.2014.02.008 |
0.752 |
|
| 2014 |
Singh V, Peng CS, Li D, Mitra K, Silvestre KJ, Tokmakoff A, Essigmann JM. Direct observation of multiple tautomers of oxythiamine and their recognition by the thiamine pyrophosphate riboswitch. Acs Chemical Biology. 9: 227-36. PMID 24252063 DOI: 10.1021/Cb400581F |
0.569 |
|
| 2014 |
Stevenson P, Götz C, Baiz CR, Vaziri A, Tokmakoff A. 2D Ir as an Experimental Probe of Ion-Induced Structural Changes in KCSA Biophysical Journal. 106: 539a-540a. DOI: 10.1016/J.Bpj.2013.11.3008 |
0.76 |
|
| 2014 |
Baiz CR, Tokmakoff A. Measuring Protein Structural Heterogeneity with Two-Dimensional Infrared Spectroscopy Biophysical Journal. 106: 459a. DOI: 10.1016/J.Bpj.2013.11.2604 |
0.696 |
|
| 2014 |
Peng CS, Baiz C, Reppert M, Li D, Fedeles BI, Singh V, Essigmann JM, Tokmakoff A. Observing Tautomerization of a Deoxycytidine Analog Kp1212: Molecular Origin of Lethal Mutagenesis Against Hiv Biophysical Journal. 106: 440a. DOI: 10.1016/J.Bpj.2013.11.2480 |
0.793 |
|
| 2013 |
Ramasesha K, De Marco L, Mandal A, Tokmakoff A. Water vibrations have strongly mixed intra- and intermolecular character. Nature Chemistry. 5: 935-40. PMID 24153371 DOI: 10.1038/Nchem.1757 |
0.841 |
|
| 2013 |
Peng CS, Baiz CR, Tokmakoff A. Direct observation of ground-state lactam-lactim tautomerization using temperature-jump transient 2D IR spectroscopy. Proceedings of the National Academy of Sciences of the United States of America. 110: 9243-8. PMID 23690588 DOI: 10.1073/Pnas.1303235110 |
0.743 |
|
| 2013 |
De Marco L, Ramasesha K, Tokmakoff A. Experimental evidence of Fermi resonances in isotopically dilute water from ultrafast broadband IR spectroscopy. The Journal of Physical Chemistry. B. 117: 15319-27. PMID 23638966 DOI: 10.1021/Jp4034613 |
0.853 |
|
| 2013 |
Reppert M, Tokmakoff A. Electrostatic frequency shifts in amide I vibrational spectra: direct parameterization against experiment. The Journal of Chemical Physics. 138: 134116. PMID 23574217 DOI: 10.1063/1.4798938 |
0.769 |
|
| 2013 |
Luan B, Shan B, Baiz C, Tokmakoff A, Raleigh DP. Cooperative cold denaturation: the case of the C-terminal domain of ribosomal protein L9. Biochemistry. 52: 2402-9. PMID 23461364 DOI: 10.1021/Bi3016789 |
0.613 |
|
| 2013 |
Jones KC, Peng CS, Tokmakoff A. Folding of a heterogeneous β-hairpin peptide from temperature-jump 2D IR spectroscopy. Proceedings of the National Academy of Sciences of the United States of America. 110: 2828-33. PMID 23382249 DOI: 10.1073/Pnas.1211968110 |
0.621 |
|
| 2013 |
Baiz CR, Reppert M, Tokmakoff A. Amide I two-dimensional infrared spectroscopy: methods for visualizing the vibrational structure of large proteins. The Journal of Physical Chemistry. A. 117: 5955-61. PMID 23228111 DOI: 10.1021/Jp310689A |
0.825 |
|
| 2013 |
Baiz C, Peng CS, Reppert M, Jones KC, Tokmakoff A. Two-Dimensional Infrared Spectroscopy as a Probe of Protein Folding: Bridging the Gap between Experiment and Simulation Biophysical Journal. 104: 188a. DOI: 10.1016/J.Bpj.2012.11.1062 |
0.829 |
|
| 2012 |
Peng CS, Tokmakoff A. Identification of Lactam-Lactim Tautomers of Aromatic Heterocycles in Aqueous Solution Using 2D IR Spectroscopy. The Journal of Physical Chemistry Letters. 3: 3302-3306. PMID 23227298 DOI: 10.1021/Jz301706A |
0.655 |
|
| 2012 |
Ramasesha K, De Marco L, Horning AD, Mandal A, Tokmakoff A. A phenomenological approach to modeling chemical dynamics in nonlinear and two-dimensional spectroscopy. The Journal of Chemical Physics. 136: 134507. PMID 22482572 DOI: 10.1063/1.3700718 |
0.807 |
|
| 2012 |
Baiz CR, Peng CS, Reppert ME, Jones KC, Tokmakoff A. Coherent two-dimensional infrared spectroscopy: quantitative analysis of protein secondary structure in solution. The Analyst. 137: 1793-9. PMID 22398665 DOI: 10.1039/C2An16031E |
0.812 |
|
| 2012 |
Lessing J, Roy S, Reppert M, Baer M, Marx D, Jansen TL, Knoester J, Tokmakoff A. Identifying residual structure in intrinsically disordered systems: a 2D IR spectroscopic study of the GVGXPGVG peptide. Journal of the American Chemical Society. 134: 5032-5. PMID 22356513 DOI: 10.1021/Ja2114135 |
0.8 |
|
| 2012 |
Jones KC, Ganim Z, Peng CS, Tokmakoff A. Transient two-dimensional spectroscopy with linear absorption corrections applied to temperature-jump two-dimensional infrared Journal of the Optical Society of America B: Optical Physics. 29: 118-129. DOI: 10.1364/Josab.29.000118 |
0.796 |
|
| 2011 |
Roy S, Lessing J, Meisl G, Ganim Z, Tokmakoff A, Knoester J, Jansen TL. Solvent and conformation dependence of amide I vibrations in peptides and proteins containing proline. The Journal of Chemical Physics. 135: 234507. PMID 22191886 DOI: 10.1063/1.3665417 |
0.811 |
|
| 2011 |
Peng CS, Jones KC, Tokmakoff A. Anharmonic vibrational modes of nucleic acid bases revealed by 2D IR spectroscopy. Journal of the American Chemical Society. 133: 15650-60. PMID 21861514 DOI: 10.1021/Ja205636H |
0.674 |
|
| 2011 |
Ramasesha K, Roberts ST, Nicodemus RA, Mandal A, Tokmakoff A. Ultrafast 2D IR anisotropy of water reveals reorientation during hydrogen-bond switching. The Journal of Chemical Physics. 135: 054509. PMID 21823714 DOI: 10.1063/1.3623008 |
0.815 |
|
| 2011 |
Nicodemus RA, Corcelli SA, Skinner JL, Tokmakoff A. Collective hydrogen bond reorganization in water studied with temperature-dependent ultrafast infrared spectroscopy. The Journal of Physical Chemistry. B. 115: 5604-16. PMID 21417373 DOI: 10.1021/Jp111434U |
0.468 |
|
| 2011 |
Roberts ST, Ramasesha K, Petersen PB, Mandal A, Tokmakoff A. Proton transfer in concentrated aqueous hydroxide visualized using ultrafast infrared spectroscopy. The Journal of Physical Chemistry. A. 115: 3957-72. PMID 21314148 DOI: 10.1021/Jp108474P |
0.813 |
|
| 2011 |
Ganim Z, Tokmakoff A, Vaziri A. Vibrational excitons in ionophores: Experimental probes for quantum coherence-assisted ion transport and selectivity in ion channels New Journal of Physics. 13. DOI: 10.1088/1367-2630/13/11/113030 |
0.746 |
|
| 2011 |
Roberts ST, Loparo JJ, Ramasesha K, Tokmakoff A. A fast-scanning Fourier transform 2D IR interferometer Optics Communications. 284: 1062-1066. DOI: 10.1016/J.Optcom.2010.10.049 |
0.811 |
|
| 2010 |
Smith AW, Lessing J, Ganim Z, Peng CS, Tokmakoff A, Roy S, Jansen TL, Knoester J. Melting of a beta-hairpin peptide using isotope-edited 2D IR spectroscopy and simulations. The Journal of Physical Chemistry. B. 114: 10913-24. PMID 20690697 DOI: 10.1021/Jp104017H |
0.814 |
|
| 2010 |
Petersen PB, Tokmakoff A. Source for ultrafast continuum infrared and terahertz radiation. Optics Letters. 35: 1962-4. PMID 20548353 DOI: 10.1364/Ol.35.001962 |
0.603 |
|
| 2010 |
Ganim Z, Jones KC, Tokmakoff A. Insulin dimer dissociation and unfolding revealed by amide I two-dimensional infrared spectroscopy. Physical Chemistry Chemical Physics : Pccp. 12: 3579-88. PMID 20336256 DOI: 10.1039/B923515A |
0.775 |
|
| 2010 |
Nicodemus RA, Ramasesha K, Roberts ST, Tokmakoff A. Hydrogen bond rearrangements in water probed with temperature-dependent 2D IR Journal of Physical Chemistry Letters. 1: 1068-1072. DOI: 10.1021/Jz100138Z |
0.815 |
|
| 2010 |
Ramasesha K, Nicodemus RA, Mandal A, Tokmakoff A. Orientational dynamics of water probed with 2D-IR anisotropy measurements Optics Infobase Conference Papers. |
0.809 |
|
| 2009 |
Jones KC, Ganim Z, Tokmakoff A. Heterodyne-detected dispersed vibrational echo spectroscopy. The Journal of Physical Chemistry. A. 113: 14060-6. PMID 19938867 DOI: 10.1021/Jp906256S |
0.773 |
|
| 2009 |
Roberts ST, Petersen PB, Ramasesha K, Tokmakoff A, Ufimtsev IS, Martinez TJ. Observation of a Zundel-like transition state during proton transfer in aqueous hydroxide solutions. Proceedings of the National Academy of Sciences of the United States of America. 106: 15154-9. PMID 19666493 DOI: 10.1073/Pnas.0901571106 |
0.836 |
|
| 2009 |
Roberts ST, Ramasesha K, Tokmakoff A. Structural rearrangements in water viewed through two-dimensional infrared spectroscopy. Accounts of Chemical Research. 42: 1239-49. PMID 19585982 DOI: 10.1021/Ar900088G |
0.846 |
|
| 2009 |
Deflores LP, Ganim Z, Nicodemus RA, Tokmakoff A. Amide I'-II' 2D IR spectroscopy provides enhanced protein secondary structural sensitivity. Journal of the American Chemical Society. 131: 3385-91. PMID 19256572 DOI: 10.1021/Ja8094922 |
0.748 |
|
| 2009 |
Loparo JJ, Roberts ST, Nicodemus RA, Tokmakoff A. Erratum to “Variation of the transition dipole across the OH stretching band of water” [Chem. Phys. 341 (2007) 218–229] Chemical Physics. 361: 185. DOI: 10.1016/J.Chemphys.2009.06.001 |
0.743 |
|
| 2009 |
Ganim Z, Jones KC, Tokmakoff A. Dissociation and Unfolding of Insulin Dimers Biophysical Journal. 96: 388a. DOI: 10.1016/J.Bpj.2008.12.2899 |
0.748 |
|
| 2009 |
Lessing J, Roberts S, Kim J, Jones K, Ganim Z, Tokmakoff A. Multidimensional IR Study Of The Structure And Dynamics Of Elastin Protein Biophysical Journal. 96: 322a. DOI: 10.1016/J.Bpj.2008.12.1617 |
0.837 |
|
| 2009 |
Chung HS, Ganim Z, Jones KC, Tokmakoff A. Transient Nonlinear Infrared Spectroscopy of Ubiquitin Unfolding Dynamics Biophysical Journal. 96: 320a. DOI: 10.1016/J.Bpj.2008.12.1607 |
0.785 |
|
| 2008 |
Chung HS, Shandiz A, Sosnick TR, Tokmakoff A. Probing the folding transition state of ubiquitin mutants by temperature-jump-induced downhill unfolding. Biochemistry. 47: 13870-7. PMID 19053229 DOI: 10.1021/Bi801603E |
0.347 |
|
| 2008 |
Petersen PB, Roberts ST, Ramasesha K, Nocera DG, Tokmakoff A. Ultrafast N-H vibrational dynamics of cyclic doubly hydrogen-bonded homo- and heterodimers. The Journal of Physical Chemistry. B. 112: 13167-71. PMID 18821789 DOI: 10.1021/Jp805338H |
0.825 |
|
| 2008 |
Chung HS, Tokmakoff A. Temperature-dependent downhill unfolding of ubiquitin. I. Nanosecond-to-millisecond resolved nonlinear infrared spectroscopy. Proteins. 72: 474-87. PMID 18384151 DOI: 10.1002/Prot.22043 |
0.312 |
|
| 2008 |
Chung HS, Tokmakoff A. Temperature-dependent downhill unfolding of ubiquitin. II. Modeling the free energy surface. Proteins. 72: 488-97. PMID 18384149 DOI: 10.1002/Prot.22042 |
0.31 |
|
| 2008 |
Ganim Z, Chung HS, Smith AW, Deflores LP, Jones KC, Tokmakoff A. Amide I two-dimensional infrared spectroscopy of proteins. Accounts of Chemical Research. 41: 432-41. PMID 18288813 DOI: 10.1021/Ar700188N |
0.833 |
|
| 2007 |
Decamp MF, Deflores LP, Jones KC, Tokmakoff A. Single-shot two-dimensional infrared spectroscopy. Optics Express. 15: 233-41. PMID 19532239 DOI: 10.1364/Oe.15.000233 |
0.645 |
|
| 2007 |
Deflores LP, Nicodemus RA, Tokmakoff A. Two-dimensional Fourier transform spectroscopy in the pump-probe geometry. Optics Letters. 32: 2966-8. PMID 17938668 DOI: 10.1364/Ol.32.002966 |
0.442 |
|
| 2007 |
Smith AW, Tokmakoff A. Probing local structural events in beta-hairpin unfolding with transient nonlinear infrared spectroscopy. Angewandte Chemie (International Ed. in English). 46: 7984-7. PMID 17853520 DOI: 10.1002/Anie.200701172 |
0.565 |
|
| 2007 |
Tokmakoff A. Chemistry. Shining light on the rapidly evolving structure of water. Science (New York, N.Y.). 317: 54-5. PMID 17615330 DOI: 10.1126/Science.1144515 |
0.4 |
|
| 2007 |
Chung HS, Khalil M, Smith AW, Tokmakoff A. Transient two-dimensional IR spectrometer for probing nanosecond temperature-jump kinetics. The Review of Scientific Instruments. 78: 063101. PMID 17614599 DOI: 10.1063/1.2743168 |
0.702 |
|
| 2007 |
Chung HS, Ganim Z, Jones KC, Tokmakoff A. Transient 2D IR spectroscopy of ubiquitin unfolding dynamics. Proceedings of the National Academy of Sciences of the United States of America. 104: 14237-42. PMID 17551015 DOI: 10.1073/Pnas.0700959104 |
0.778 |
|
| 2007 |
Smith AW, Tokmakoff A. Amide I two-dimensional infrared spectroscopy of beta-hairpin peptides. The Journal of Chemical Physics. 126: 045109. PMID 17286519 DOI: 10.1063/1.2428300 |
0.633 |
|
| 2007 |
Nicodemus RA, Tokmakoff A. Infrared spectroscopy of tritiated water Chemical Physics Letters. 449: 130-134. DOI: 10.1016/J.Cplett.2007.10.055 |
0.347 |
|
| 2007 |
Loparo JJ, Roberts ST, Nicodemus RA, Tokmakoff A. Variation of the transition dipole moment across the OH stretching band of water Chemical Physics. 341: 218-229. DOI: 10.1016/J.Chemphys.2007.06.056 |
0.82 |
|
| 2007 |
Schmidt JR, Roberts ST, Loparo JJ, Tokmakoff A, Fayer MD, Skinner JL. Are water simulation models consistent with steady-state and ultrafast vibrational spectroscopy experiments? Chemical Physics. 341: 143-157. DOI: 10.1016/J.Chemphys.2007.06.043 |
0.822 |
|
| 2007 |
Smith AW, Chung HS, Ganim Z, Tokmakoff A. Multidimensional IR spectroscopy of site-specific hairpin folding Springer Series in Chemical Physics. 88: 350-352. DOI: 10.1007/978-3-540-68781-8-113 |
0.688 |
|
| 2007 |
Loparo JJ, Roberts ST, Tokmakoff A. 2D IR spectroscopy of hydrogen bond switching in liquid water Springer Series in Chemical Physics. 88: 341-343. DOI: 10.1007/978-3-540-68781-8-110 |
0.776 |
|
| 2006 |
DeFlores LP, Tokmakoff A. Water penetration into protein secondary structure revealed by hydrogen-deuterium exchange two-dimensional infrared spectroscopy. Journal of the American Chemical Society. 128: 16520-1. PMID 17177399 DOI: 10.1021/Ja067723O |
0.417 |
|
| 2006 |
Loparo JJ, Roberts ST, Tokmakoff A. Multidimensional infrared spectroscopy of water. II. Hydrogen bond switching dynamics. The Journal of Chemical Physics. 125: 194522. PMID 17129138 DOI: 10.1063/1.2382896 |
0.783 |
|
| 2006 |
Loparo JJ, Roberts ST, Tokmakoff A. Multidimensional infrared spectroscopy of water. I. Vibrational dynamics in two-dimensional IR line shapes. The Journal of Chemical Physics. 125: 194521. PMID 17129137 DOI: 10.1063/1.2382895 |
0.832 |
|
| 2006 |
DeFlores LP, Ganim Z, Ackley SF, Chung HS, Tokmakoff A. The anharmonic vibrational potential and relaxation pathways of the amide I and II modes of N-methylacetamide. The Journal of Physical Chemistry. B. 110: 18973-80. PMID 16986892 DOI: 10.1021/Jp0603334 |
0.762 |
|
| 2006 |
Roberts ST, Loparo JJ, Tokmakoff A. Characterization of spectral diffusion from two-dimensional line shapes. The Journal of Chemical Physics. 125: 084502. PMID 16965024 DOI: 10.1063/1.2232271 |
0.787 |
|
| 2006 |
Ganim Z, Tokmakoff A. Spectral signatures of heterogeneous protein ensembles revealed by MD Simulations of 2DIR spectra. Biophysical Journal. 91: 2636-46. PMID 16844758 DOI: 10.1529/Biophysj.106.088070 |
0.772 |
|
| 2006 |
Chung HS, Tokmakoff A. Visualization and characterization of the infrared active amide I vibrations of proteins. The Journal of Physical Chemistry. B. 110: 2888-98. PMID 16471899 DOI: 10.1021/Jp053956A |
0.423 |
|
| 2006 |
DeCamp MF, Tokmakoff A. Single-shot two-dimensional spectrometer. Optics Letters. 31: 113-5. PMID 16419895 DOI: 10.1364/Ol.31.000113 |
0.615 |
|
| 2006 |
DeCamp MF, Jones KC, Tokmakoff A. Two-dimensional infrared spectrometer Optics Infobase Conference Papers. DOI: 10.1364/Fio.2006.Jtua4 |
0.631 |
|
| 2006 |
DeCamp MF, Tokmakoff A. Single-shot two-dimensional spectroscopy Conference On Lasers and Electro-Optics and 2006 Quantum Electronics and Laser Science Conference, Cleo/Qels 2006. DOI: 10.1109/CLEO.2006.4627786 |
0.56 |
|
| 2005 |
Eaves JD, Tokmakoff A, Geissler PL. Electric field fluctuations drive vibrational dephasing in water. The Journal of Physical Chemistry. A. 109: 9424-36. PMID 16866391 DOI: 10.1021/Jp051364M |
0.777 |
|
| 2005 |
Smith AW, Chung HS, Ganim Z, Tokmakoff A. Residual native structure in a thermally denatured beta-hairpin. The Journal of Physical Chemistry. B. 109: 17025-7. PMID 16853169 DOI: 10.1021/Jp053949M |
0.822 |
|
| 2005 |
DeCamp MF, DeFlores L, McCracken JM, Tokmakoff A, Kwac K, Cho M. Amide I vibrational dynamics of N-methylacetamide in polar solvents: the role of electrostatic interactions. The Journal of Physical Chemistry. B. 109: 11016-26. PMID 16852342 DOI: 10.1021/Jp050257P |
0.761 |
|
| 2005 |
Eaves JD, Loparo JJ, Fecko CJ, Roberts ST, Tokmakoff A, Geissler PL. Hydrogen bonds in liquid water are broken only fleetingly. Proceedings of the National Academy of Sciences of the United States of America. 102: 13019-22. PMID 16135564 DOI: 10.1073/Pnas.0505125102 |
0.821 |
|
| 2005 |
DeCamp MF, Tokmakoff A. Upconversion multichannel infrared spectrometer. Optics Letters. 30: 1818-20. PMID 16092356 DOI: 10.1364/Ol.30.001818 |
0.582 |
|
| 2005 |
Harder E, Eaves JD, Tokmakoff A, Berne BJ. Polarizable molecules in the vibrational spectroscopy of water. Proceedings of the National Academy of Sciences of the United States of America. 102: 11611-6. PMID 16081533 DOI: 10.1073/Pnas.0505206102 |
0.769 |
|
| 2005 |
Fecko CJ, Loparo JJ, Roberts ST, Tokmakoff A. Local hydrogen bonding dynamics and collective reorganization in water: ultrafast infrared spectroscopy of HOD/D(2)O. The Journal of Chemical Physics. 122: 54506. PMID 15740338 DOI: 10.1063/1.1839179 |
0.847 |
|
| 2005 |
Garrett BC, Dixon DA, Camaioni DM, Chipman DM, Johnson MA, Jonah CD, Kimmel GA, Miller JH, Rescigno TN, Rossky PJ, Xantheas SS, Colson SD, Laufer AH, Ray D, Barbara PF, ... ... Tokmakoff A, et al. Role of water in electron-initiated processes and radical chemistry: issues and scientific advances. Chemical Reviews. 105: 355-90. PMID 15720157 DOI: 10.1021/Cr030453X |
0.608 |
|
| 2005 |
Chung HS, Khalil M, Smith AW, Ganim Z, Tokmakoff A. Conformational changes during the nanosecond-to-millisecond unfolding of ubiquitin. Proceedings of the National Academy of Sciences of the United States of America. 102: 612-7. PMID 15630083 DOI: 10.1073/Pnas.0408646102 |
0.827 |
|
| 2005 |
Chou SG, DeCamp MF, Jiang J, Samsonidze GG, Barros EB, Plentz F, Jorio A, Zheng M, Onoa GB, Semke ED, Tokmakoff A, Saito R, Dresselhaus G, Dresselhaus MS. Phonon-assisted exciton relaxation dynamics for a (6,5)-enriched DNA-wrapped single-walled carbon nanotube sample Physical Review B - Condensed Matter and Materials Physics. 72. DOI: 10.1103/Physrevb.72.195415 |
0.603 |
|
| 2004 |
Cheatum CM, Tokmakoff A, Knoester J. Signatures of beta-sheet secondary structures in linear and two-dimensional infrared spectroscopy. The Journal of Chemical Physics. 120: 8201-15. PMID 15267740 DOI: 10.1063/1.1689637 |
0.711 |
|
| 2004 |
Khalil M, Demirdöven N, Tokmakoff A. Vibrational coherence transfer characterized with Fourier-transform 2D IR spectroscopy. The Journal of Chemical Physics. 121: 362-73. PMID 15260555 DOI: 10.1063/1.1756870 |
0.67 |
|
| 2004 |
Demirdöven N, Cheatum CM, Chung HS, Khalil M, Knoester J, Tokmakoff A. Two-dimensional infrared spectroscopy of antiparallel beta-sheet secondary structure. Journal of the American Chemical Society. 126: 7981-90. PMID 15212548 DOI: 10.1021/Ja049811J |
0.796 |
|
| 2004 |
Loparo JJ, Fecko CJ, Eaves JD, Roberts ST, Tokmakoff A. Reorientational and configurational fluctuations in water observed on molecular length scales Physical Review B - Condensed Matter and Materials Physics. 70: 1-4. DOI: 10.1103/Physrevb.70.180201 |
0.781 |
|
| 2004 |
Chung HS, Khalil M, Tokmakoff A. Nonlinear infrared spectroscopy of protein conformational change during thermal unfolding Journal of Physical Chemistry B. 108: 15332-15342. DOI: 10.1021/Jp0479926 |
0.662 |
|
| 2004 |
Fecko CJ, Loparo JJ, Tokmakoff A. Generation of 45 femtosecond pulses at 3 μm with a KNbO3 optical parametric amplifier Optics Communications. 241: 521-528. DOI: 10.1016/J.Optcom.2004.07.038 |
0.785 |
|
| 2004 |
Chung HS, Khalil M, Smith AW, Ganim Z, Tokmakoff A. Thermal denaturing of proteins: Equilibrium and transient studies using nonlinear infrared probes Springer Series in Chemical Physics. 79: 551-553. DOI: 10.1007/3-540-27213-5_168 |
0.826 |
|
| 2004 |
Fecko CJ, Eaves JD, Loparo JJ, Roberts ST, Tokmakoff A, Geissler PL. Dynamics of hydrogen bonds in water: Vibrational echoes and two-dimensional infrared spectroscopy Springer Series in Chemical Physics. 79: 535-538. DOI: 10.1007/3-540-27213-5_163 |
0.838 |
|
| 2004 |
DeCamp MF, DeFlores LP, McCracken JM, Tokmakoff A. Solvation dynamics of N-methylacetamide in D2O, CDCl3 and DMSO-d6 Springer Series in Chemical Physics. 79: 422-424. DOI: 10.1007/3-540-27213-5_130 |
0.664 |
|
| 2004 |
Loparo JJ, Fecko CJ, Eaves JD, Roberts ST, Tokmakoff A. A unified analysis of ultrafast vibrational and orientational dynamics of HOD in D2O Springer Series in Chemical Physics. 79: 410-412. DOI: 10.1007/3-540-27213-5_126 |
0.839 |
|
| 2003 |
Fecko CJ, Eaves JD, Loparo JJ, Tokmakoff A, Geissler PL. Ultrafast hydrogen-bond dynamics in the infrared spectroscopy of water. Science (New York, N.Y.). 301: 1698-702. PMID 14500975 DOI: 10.1126/Science.1087251 |
0.84 |
|
| 2003 |
Khalil M, Demirdöven N, Tokmakoff A. Obtaining absorptive line shapes in two-dimensional infrared vibrational correlation spectra. Physical Review Letters. 90: 047401. PMID 12570457 DOI: 10.1103/Physrevlett.90.047401 |
0.66 |
|
| 2003 |
Khalil M, Demirdöven N, Tokmakoff A. Coherent 2D IR spectroscopy: Molecular structure and dynamics in solution Journal of Physical Chemistry A. 107: 5258-5279. DOI: 10.1021/Jp0219247 |
0.656 |
|
| 2003 |
Eaves JD, Fecko CJ, Stevens AL, Peng P, Tokmakoff A. Polarization-selective femtosecond Raman spectroscopy of low-frequency motions in hydrated protein films Chemical Physics Letters. 376: 20-25. DOI: 10.1016/S0009-2614(03)00890-X |
0.821 |
|
| 2003 |
Khalil M, Demirdöven N, Tokmakoff A. Coherent two-dimensional fourier transform infrared spectroscopy Springer Series in Chemical Physics. 71: 583-585. |
0.491 |
|
| 2003 |
Demirdöven N, Khalil M, Tokmakoff A. Correlated vibrational dynamics in solution studied by two-dimensional Fourier transform infrared spectroscopy Springer Series in Chemical Physics. 71: 589-591. |
0.571 |
|
| 2002 |
Demirdöven N, Khalil M, Golonzka O, Tokmakoff A. Dispersion compensation with optical materials for compression of intense sub-100-fs mid-infrared pulses. Optics Letters. 27: 433-5. PMID 18007825 DOI: 10.1364/Ol.27.000433 |
0.512 |
|
| 2002 |
Demirdöven N, Khalil M, Tokmakoff A. Correlated vibrational dynamics revealed by two-dimensional infrared spectroscopy. Physical Review Letters. 89: 237401. PMID 12485039 |
0.584 |
|
| 2002 |
Fecko CJ, Eaves JD, Tokmakoff A. Isotropic and anisotropic Raman scattering from molecular liquids measured by spatially masked optical Kerr effect spectroscopy Journal of Chemical Physics. 117: 1139-1154. DOI: 10.1063/1.1485070 |
0.804 |
|
| 2002 |
Golonzka O, Khalil M, Demirdöven N, Tokmakoff A. Third-order nonlinear spectroscopy of coupled vibrations Acs Symposium Series. 820: 169-181. |
0.53 |
|
| 2002 |
Tokmakoff A. Coherent two-dimensional vibrational spectroscopy of molecular dynamics in solution Conference On Quantum Electronics and Laser Science (Qels) - Technical Digest Series. 74: 243. |
0.344 |
|
| 2001 |
Golonzka O, Khalil M, Demirdöven N, Tokmakoff A. Vibrational anharmonicities revealed by coherent two-dimensional infrared spectroscopy. Physical Review Letters. 86: 2154-7. PMID 11289878 DOI: 10.1103/Physrevlett.86.2154 |
0.632 |
|
| 2001 |
Golonzka O, Khalil M, Demirdöven N, Tokmakoff A. Coupling and orientation between anharmonic vibrations characterized with two-dimensional infrared vibration echo spectroscopy Journal of Chemical Physics. 115: 10814-10828. DOI: 10.1063/1.1417504 |
0.646 |
|
| 2001 |
Demirdöven N, Khalil M, Golonzka O, Tokmakoff A. Correlation effects in the two-dimensional vibrational spectroscopy of coupled vibrations Journal of Physical Chemistry A. 105: 8025-8030. DOI: 10.1021/Jp011215D |
0.646 |
|
| 2001 |
Khalil M, Tokmakoff A. Signatures of vibrational interactions in coherent two-dimensional infrared spectroscopy Chemical Physics. 266: 213-230. DOI: 10.1016/S0301-0104(01)00230-0 |
0.654 |
|
| 2001 |
Khalil M, Golonzka O, Demirdöven N, Tokmakoff A. Phase-sensitive detection for polarization-selective femtosecond Raman spectroscopy Springer Series in Chemical Physics. 66: 545-547. |
0.454 |
|
| 2000 |
Golonzka O, Demirdöven N, Khalil M, Tokmakoff A. Separation of cascaded and direct fifth-order Raman signals using phase-sensitive intrinsic heterodyne detection Journal of Chemical Physics. 113: 9893-9896. DOI: 10.1063/1.1330236 |
0.496 |
|
| 2000 |
Khalil M, Demirdoven N, Golonzka O, Fecko CJ, Tokmakoff A. A phase-sensitive detection method using diffractive optics for polarization-selective femtosecond raman spectroscopy Journal of Physical Chemistry A. 104: 5711-5715. DOI: 10.1021/Jp994455Q |
0.762 |
|
| 2000 |
Tokmakoff A. Two-dimensional line shapes derived from coherent third-order nonlinear spectroscopy Journal of Physical Chemistry A. 104: 4247-4255. DOI: 10.1021/Jp993207R |
0.374 |
|
| 2000 |
Khalil M, Golonzka O, Demirdöven N, Fecko CJ, Tokmakoff A. Polarization-selective femtosecond Raman spectroscopy of isotropic and anisotropic vibrational dynamics in liquids Chemical Physics Letters. 321: 231-237. DOI: 10.1016/S0009-2614(00)00314-6 |
0.808 |
|
| 1999 |
Okumura K, Tokmakoff A, Tanimura Y. Structural information from two-dimensional fifth-order Raman spectroscopy Journal of Chemical Physics. 111: 492-503. DOI: 10.1063/1.479383 |
0.403 |
|
| 1999 |
Okumura K, Tokmakoff A, Tanimura Y. Two-dimensional line-shape analysis of photon-echo signal Chemical Physics Letters. 314: 488-495. DOI: 10.1016/S0009-2614(99)01173-2 |
0.352 |
|
| 1998 |
Tokmakoff A, Lang MJ, Larsen DS, Jordanides XJ, Fleming GR. Studies of molecular interactions and collective liquid motions with two-dimensional Raman spectroscopy Springer Series in Chemical Physics. 63: 538-540. |
0.8 |
|
| 1998 |
Tokmakoff A, Lang MJ, Jordanides XJ, Fleming GR. The intermolecular interaction mechanisms in liquid CS2 at 295 and 165 K probed with two-dimensional Raman spectroscopy Chemical Physics. 233: 231-242. |
0.797 |
|
| 1997 |
Tokmakoff A, Lang MJ, Larsen DS, Fleming GR, Chernyak V, Mukamel S. Two-dimensional Raman spectroscopy of vibrational interactions in liquids Physical Review Letters. 79: 2702-2705. DOI: 10.1103/Physrevlett.79.2702 |
0.81 |
|
| 1997 |
Rector KD, Kwok AS, Ferrante C, Tokmakoff A, Rella CW, Fayer MD. Vibrational anharmonicity and multilevel vibrational dephasing from vibrational echo beats Journal of Chemical Physics. 106: 10027-10036. DOI: 10.1063/1.474060 |
0.765 |
|
| 1997 |
Tokmakoff A, Fleming GR. Two-dimensional Raman spectroscopy of the intermolecular modes of liquid CS2 Journal of Chemical Physics. 106: 2569-2582. DOI: 10.1063/1.473361 |
0.687 |
|
| 1997 |
Tokmakoff A, Lang MJ, Larsen DS, Fleming GR. Intrinsic optical heterodyne detection of a two-dimensional fifth order Raman response Chemical Physics Letters. 272: 48-54. DOI: 10.1016/S0009-2614(97)00479-X |
0.79 |
|
| 1997 |
Rector KD, Kwok AS, Ferrante C, Tokmakoff A, Rella CW, Fayer MD. Vibrational anharmonicity and multilevel vibrational dephasing from vibrational echo beats Journal of Chemical Physics. 106: 10027-10036. |
0.698 |
|
| 1995 |
Tokmakoff A, Fayer MD. Homogeneous vibrational dynamics and inhomogeneous broadening in glass‐forming liquids: Infrared photon echo experiments from room temperature to 10 K The Journal of Chemical Physics. 103: 2810-2826. DOI: 10.1063/1.470517 |
0.577 |
|
| 1995 |
Moore P, Tokmakoff A, Keyes T, Fayer MD. The low frequency density of states and vibrational population dynamics of polyatomic molecules in liquids The Journal of Chemical Physics. 103: 3325-3334. DOI: 10.1063/1.470266 |
0.588 |
|
| 1995 |
Tokmakoff A, Urdahl RS, Zimdars D, Francis RS, Kwok AS, Fayer MD. Vibrational spectral diffusion and population dynamics in a glass-forming liquid: Variable bandwidth picosecond infrared spectroscopy Journal of Chemical Physics. 102: 3919-3931. DOI: 10.1063/1.468568 |
0.588 |
|
| 1995 |
Tokmakoff A, Zimdars D, Urdahl RS, Francis RS, Kwok AS, Fayer MD. Infrared Vibrational Photon Echo Experiments In Liquids And Glasses The Journal of Physical Chemistry. 99: 13310-13320. DOI: 10.1021/J100036A003 |
0.558 |
|
| 1995 |
Tokmakoff A, Fayer MD. Infrared Photon Echo Experiments: Exploring Vibrational Dynamics in Liquids and Glasses Accounts of Chemical Research. 28: 437-445. DOI: 10.1021/Ar00059A001 |
0.575 |
|
| 1995 |
Tokmakoff A, Kowk A, Urhdal R, Zimdars DA, Fayer MD. Vibrational dynamics in condensed matter probed with linac based FELs Nuclear Inst. and Methods in Physics Research, A. 358: 540-543. DOI: 10.1016/0168-9002(94)01598-8 |
0.604 |
|
| 1995 |
Tokmakoff A, Kwok AS, Urdahl RS, Francis RS, Fayer MD. Multilevel vibrational dephasing and vibrational anharmonicity from infrared photon echo beats Chemical Physics Letters. 234: 289-295. DOI: 10.1016/0009-2614(95)00068-F |
0.586 |
|
| 1995 |
Tokmakoff A, Fayer MD. Infrared Photon Echo Experiments: Exploring Vibrational Dynamics in Liquids and Glasses Accounts of Chemical Research. 28: 437-444. |
0.308 |
|
| 1995 |
Tokmakoff A, Urdahl RS, Zimdars D, Francis RS, Kwok AS, Fayer MD. Vibrational spectral diffusion and population dynamics in a glass-forming liquid: Variable bandwidth picosecond infrared spectroscopy The Journal of Chemical Physics. 102: 3919-3931. |
0.314 |
|
| 1994 |
Kenkre VM, Tokmakoff A, Fayer MD. Theory of vibrational relaxation of polyatomic molecules in liquids The Journal of Chemical Physics. 101: 10618-10629. DOI: 10.1063/1.467876 |
0.528 |
|
| 1994 |
Tokmakoff A, Zimdars D, Sauter B, Francis RS, Kwok AS, Fayer MD. Vibrational photon echoes in a liquid and glass: Room temperature to 10 K Journal of Chemical Physics. 101: 1741-1744. DOI: 10.1063/1.467731 |
0.555 |
|
| 1994 |
Tokmakoff A, Sauter B, Fayer MD. Temperature‐dependent vibrational relaxation in polyatomic liquids: Picosecond infrared pump–probe experiments The Journal of Chemical Physics. 100: 9035-9043. DOI: 10.1063/1.466709 |
0.592 |
|
| 1994 |
Hill JR, Tokmakoff A, Peterson KA, Sauter B, Zimdars D, Dlott DD, Fayer MD. Vibrational Dynamics of Carbon Monoxide at the Active Site of Myoglobin: Picosecond Infrared Free-Electron Laser Pump-Probe Experiments The Journal of Physical Chemistry. 98: 11213-11219. DOI: 10.1021/J100094A032 |
0.653 |
|
| 1994 |
Tokmakoff A, Sauter B, Kwok AS, Fayer MD. Phonon-induced scattering between vibrations and multiphoton vibrational up-pumping in liquid solution Chemical Physics Letters. 221: 412-418. DOI: 10.1016/0009-2614(94)00276-2 |
0.563 |
|
| 1994 |
Tokmakoff A, Sauter B, Fayer MD. Temperature-dependent vibrational relaxation in polyatomic liquids: Picosecond infrared pump-probe experiments The Journal of Chemical Physics. 100: 9035-9043. |
0.321 |
|
| 1994 |
Hill JR, Tokmakoff A, Peterson KA, Sauter B, Zimdars D, Dlott DD, Fayer MD. Vibrational dynamics of carbon monoxide at the active site of myoglobin: Picosecond infrared free-electron laser pump-probe experiments Journal of Physical Chemistry. 98: 11213-11219. |
0.518 |
|
| 1993 |
Zimdars D, Tokmakoff A, Chen S, Greenfield SR, Fayer MD, Smith TI, Schwettman HA. Picosecond infrared vibrational photon echoes in a liquid and glass using a free electron laser. Physical Review Letters. 70: 2718-2721. PMID 10053635 DOI: 10.1103/Physrevlett.70.2718 |
0.562 |
|
| 1993 |
Tokmakoff A, Marshall CD, Fayer MD. Optical parametric amplification of 1-kHz high-energy picosecond midinfrared pulses and application to infrared transient-grating experiments on diamond Journal of the Optical Society of America B: Optical Physics. 10: 1785-1791. DOI: 10.1364/Josab.10.001785 |
0.477 |
|
| 1993 |
Fishman IM, Marshall CD, Tokmakoff A, Fayer MD. Transient grating diffraction from an interface between two materials: Theory and experimental application Journal of the Optical Society of America B: Optical Physics. 10: 1006-1016. DOI: 10.1364/Josab.10.001006 |
0.457 |
|
| 1993 |
Fayer MD, Zimdars D, Tokmakoff A, Chen S, Greenfield SR, Smith TI, Schwettman HA. Picosecond infrared vibrational photon echoes and lifetime measurements using the Stanford superconducting-accelerator-pumped free-electron laser Proceedings of Spie. 1854: 86-93. DOI: 10.1117/12.148031 |
0.603 |
|
| 1993 |
Marshall CD, Tokmakoff A, Fishman IM, Fayer MD. Interface selective transient grating spectroscopy: theory and applications to thermal flow and acoustic propagation in superconducting thin films Proceedings of Spie. 1861: 302-313. DOI: 10.1117/12.147063 |
0.461 |
|
| 1993 |
Marshall CD, Tokmakoff A, Fishman IM, Eom CB, Phillips JM, Fayer MD. Thermal boundary resistance and diffusivity measurements on thin YBa 2Cu3O7-x films with MgO and SrTiO3 substrates using the transient grating method Journal of Applied Physics. 73: 850-857. DOI: 10.1063/1.353296 |
0.457 |
|
| 1993 |
Tokmakoff A, Fayer MD, Dlott DD. Chemical reaction initiation and hot-spot formation in shocked energetic molecular materials The Journal of Physical Chemistry. 97: 1901-1913. DOI: 10.1021/J100111A031 |
0.629 |
|
| 1993 |
Tokmakoff A, Fayer MD, Dlott DD. Chemical reaction initiation and hot-spot formation in shocked energetic molecular materials Journal of Physical Chemistry. 97: 1901-1913. |
0.422 |
|
| 1992 |
Fayer MD, Tokmakoff A, Dlott DD. Shocked Energetic Molecular Materials: Chemical Reaction Initiation and Hot Spot Formation Mrs Proceedings. 296. DOI: 10.1557/Proc-296-379 |
0.677 |
|
| 1992 |
Stankus JJ, Torre R, Marshall CD, Greenfield SR, Sengupta A, Tokmakoff A, Fayer MD. Nanosecond time scale dynamics of pseudo-nematic domains in the isotropic phase of liquid crystals Chemical Physics Letters. 194: 213-216. DOI: 10.1016/0009-2614(92)85537-K |
0.718 |
|
| Show low-probability matches. |
