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Elliot S Friedman - Publications

Affiliations: 
University of Pennsylvania, Philadelphia, PA, United States 
Area:
microbiome, microbial ecology, environmental engineering, biological engineering, anaerobic microbiology, biogeochemistry
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36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Bass R, Tanes C, Bittinger K, Li Y, Lee H, Friedman ES, Koo I, Patterson AD, Liu Q, Wu GD, Stallings VA. Changes in fecal lipidome after treatment with ivacaftor without changes in microbiome or bile acids. Journal of Cystic Fibrosis : Official Journal of the European Cystic Fibrosis Society. PMID 37813785 DOI: 10.1016/j.jcf.2023.09.010  0.487
2023 Lemons JMS, Conrad M, Tanes C, Chen J, Friedman ES, Roggiani M, Curry D, Chau L, Hecht AL, Harling L, Vales J, Kachelries KE, Baldassano RN, Goulian M, Bittinger K, et al. Enterobacteriaceae Growth Promotion by Intestinal Acylcarnitines, a Biomarker of Dysbiosis in Inflammatory Bowel Disease. Cellular and Molecular Gastroenterology and Hepatology. PMID 37739064 DOI: 10.1016/j.jcmgh.2023.09.005  0.536
2023 Liu L, Narrowe AB, Firrman JA, Mahalak KK, Bobokalonov JT, Lemons JMS, Bittinger K, Daniel S, Tanes C, Mattei L, Friedman ES, Soares JW, Kobori M, Zeng WB, Tomasula PM. Strain GG (LGG) Regulate Gut Microbial Metabolites, an In Vitro Study Using Three Mature Human Gut Microbial Cultures in a Simulator of Human Intestinal Microbial Ecosystem (SHIME). Foods (Basel, Switzerland). 12. PMID 37297350 DOI: 10.3390/foods12112105  0.304
2023 Hecht AL, Harling LC, Friedman ES, Tanes C, Lee J, Firrman J, Tu V, Liu L, Bittinger K, Goulian M, Wu GD. Colonization and Dissemination of is Dependent on Dietary Carbohydrates. Biorxiv : the Preprint Server For Biology. PMID 37292978 DOI: 10.1101/2023.05.25.542283  0.575
2023 Carr RM, Li Y, Chau L, Friedman ES, Lee JJ, Adorini L, Erickson M, Zaru L, Shringarpure R, MacConell L, Bittinger K, Li H, Wu GD. An integrated analysis of fecal microbiome and metabolomic features distinguish Non-cirrhotic NASH from healthy control populations. Hepatology (Baltimore, Md.). PMID 37222264 DOI: 10.1097/HEP.0000000000000474  0.496
2022 Lund PJ, Gates LA, Leboeuf M, Smith SA, Chau L, Lopes M, Friedman ES, Saiman Y, Kim MS, Shoffler CA, Petucci C, Allis CD, Wu GD, Garcia BA. Stable isotope tracing in vivo reveals a metabolic bridge linking the microbiota to host histone acetylation. Cell Reports. 41: 111809. PMID 36516747 DOI: 10.1016/j.celrep.2022.111809  0.546
2022 Perler BK, Friedman ES, Wu GD. The Role of the Gut Microbiota in the Relationship Between Diet and Human Health. Annual Review of Physiology. PMID 36375468 DOI: 10.1146/annurev-physiol-031522-092054  0.544
2022 Bartolo L, Afroz S, Pan YG, Xu R, Williams L, Lin CF, Tanes C, Bittinger K, Friedman ES, Gimotty PA, Wu GD, Su LF. SARS-CoV-2-specific T cells in unexposed adults display broad trafficking potential and cross-react with commensal antigens. Science Immunology. eabn3127. PMID 35857619 DOI: 10.1126/sciimmunol.abn3127  0.461
2022 Kastl A, Zong W, Gershuni VM, Friedman ES, Tanes C, Boateng A, Mitchell WJ, O'Connor K, Bittinger K, Terry NA, Bales C, Albenberg L, Wu GD. Dietary fiber-based regulation of bile salt hydrolase activity in the gut microbiota and its relevance to human disease. Gut Microbes. 14: 2083417. PMID 35658830 DOI: 10.1080/19490976.2022.2083417  0.55
2022 Mennella JA, Li Y, Bittinger K, Friedman ES, Zhao C, Li H, Wu GD, Trabulsi JC. The Macronutrient Composition of Infant Formula Produces Differences in Gut Microbiota Maturation That Associate with Weight Gain Velocity and Weight Status. Nutrients. 14. PMID 35334900 DOI: 10.3390/nu14061241  0.471
2021 Bartolo L, Afroz S, Pan YG, Xu R, Williams L, Lin CF, Friedman ES, Gimotty PA, Wu GD, Su LF. SARS-CoV-2-specific T cells in unexposed adults display broad trafficking potential and cross-react with commensal antigens. Biorxiv : the Preprint Server For Biology. PMID 34873598 DOI: 10.1101/2021.11.29.470421  0.454
2021 Saiman Y, Shen TD, Lund PJ, Gershuni VM, Jang C, Patel S, Jung S, Furth EE, Friedman ES, Chau L, Garcia BA, Wu GD. Global Microbiota-Dependent Histone Acetylation Patterns are Irreversible and Independent of Short Chain Fatty Acids. Hepatology (Baltimore, Md.). PMID 34233020 DOI: 10.1002/hep.32043  0.54
2021 Weiss SL, Bittinger K, Lee JJ, Friedman ES, Mattei LM, Graham K, Zhang D, Bush J, Balamuth F, McGowan FX, Bushman FD, Baldassano RN, Wu GD, Wallace DC, Collman RG. Decreased Intestinal Microbiome Diversity in Pediatric Sepsis: A Conceptual Framework for Intestinal Dysbiosis to Influence Immunometabolic Function. Critical Care Explorations. 3: e0360. PMID 33786436 DOI: 10.1097/CCE.0000000000000360  0.551
2021 Tanes C, Bittinger K, Gao Y, Friedman ES, Nessel L, Paladhi UR, Chau L, Panfen E, Fischbach MA, Braun J, Xavier RJ, Clish CB, Li H, Bushman FD, Lewis JD, et al. Role of dietary fiber in the recovery of the human gut microbiome and its metabolome. Cell Host & Microbe. PMID 33440171 DOI: 10.1016/j.chom.2020.12.012  0.585
2020 Bittinger K, Zhao C, Li Y, Ford E, Friedman ES, Ni J, Kulkarni CV, Cai J, Tian Y, Liu Q, Patterson AD, Sarkar D, Chan SHJ, Maranas C, Saha-Shah A, et al. Bacterial colonization reprograms the neonatal gut metabolome. Nature Microbiology. PMID 32284564 DOI: 10.1038/S41564-020-0694-0  0.606
2020 Lund P, Smith S, Simithy J, Chau L, Friedman E, Saiman Y, Gates L, Leboeuf M, Trefely S, Lopes M, Yuan Z, Janssen K, Kim M, Petucci C, Snyder N, et al. P165 INFLUENCE OF THE GUT MICROBIOTA ON COLONIC HISTONE MODIFICATIONS THROUGH BUTYRATE METABOLISM UNDER HEALTHY AND INFLAMMATORY CONDITIONS Gastroenterology. 158: S67. DOI: 10.1053/J.Gastro.2019.11.170  0.573
2020 Gershuni VM, Friedman ES, Ogawa SA, Murphy D, Chau L, Wu GD. Tu1922 DIET SIGNIFICANTLY ALTERS ENTEROHEPATIC RECIRCULATION OF BILE ACIDS IN MICE. Gastroenterology. 158: S-1220. DOI: 10.1016/S0016-5085(20)33709-4  0.551
2020 Gershuni VM, Friedman ES, O'Connor K, Ogawa SA, Murphy D, Saiman Y, Chau L, Tanes C, Bittinger K, Wu GD. Tu1915 MICROBIOTA-MEDIATED EFFECTS OF DIETARY FIBER ON SMALL BOWEL BILE ACID SIGNALING AND ENTEROHEPATIC CIRCULATION IN MICE Gastroenterology. 158: S-1217. DOI: 10.1016/S0016-5085(20)33702-1  0.568
2020 Shen TD, Friedman ES, Herman LL, Murphy D, Goulian M, Wu GD. Sa1929 BACTERIAL UREASE MODULATES BOTH MICROBE-MICROBE AND MICROBE-HOST INTERACTIONS THROUGH NITROGEN METABOLISM Gastroenterology. 158: S-484. DOI: 10.1016/S0016-5085(20)31887-4  0.569
2019 Firrman J, Liu L, Tanes C, Friedman E, Bittinger K, Daniel S, van den Abbeele P, Evans BS. Metabolic analysis of regionally distinct gut microbial communities using an in vitro platform. Journal of Agricultural and Food Chemistry. PMID 31690071 DOI: 10.1021/Acs.Jafc.9B05202  0.36
2019 Wang S, Martins R, Sullivan MC, Friedman ES, Misic AM, El-Fahmawi A, De Martinis ECP, O'Brien K, Chen Y, Bradley C, Zhang G, Berry ASF, Hunter CA, Baldassano RN, Rondeau MP, et al. Diet-induced remission in chronic enteropathy is associated with altered microbial community structure and synthesis of secondary bile acids. Microbiome. 7: 126. PMID 31472697 DOI: 10.1186/S40168-019-0740-4  0.372
2019 Gershuni VM, Friedman ES. The Microbiome-Host Interaction as a Potential Driver of Anastomotic Leak. Current Gastroenterology Reports. 21: 4. PMID 30684121 DOI: 10.1007/S11894-019-0668-7  0.352
2019 Gershuni VM, Friedman ES, Ogawa SA, Tanes C, Bittinger K, Wu GD. Su2002 – Alterations in the Small Bowel Microbiota and Metabolome, Induced by the Interaction Between Dietary Fat and Fiber, are Associated with the Host Metabolic Phenotype Gastroenterology. 156: S-687. DOI: 10.1016/S0016-5085(19)38636-6  0.581
2018 Friedman ES, Li Y, Shen TD, Jiang J, Chau L, Adorini L, Babakhani F, Edwards J, Shapiro D, Zhao C, Carr RM, Bittinger K, Li H, Wu GD. FXR-Dependent Modulation of the Human Small Intestinal Microbiome by the Bile Acid Derivative Obeticholic Acid. Gastroenterology. PMID 30144429 DOI: 10.1053/J.Gastro.2018.08.022  0.591
2018 Friedman ES, Bittinger K, Esipova TV, Hou L, Chau L, Jiang J, Mesaros C, Lund PJ, Liang X, FitzGerald GA, Goulian M, Lee D, Garcia BA, Blair IA, Vinogradov SA, et al. Microbes vs. chemistry in the origin of the anaerobic gut lumen. Proceedings of the National Academy of Sciences of the United States of America. PMID 29610310 DOI: 10.1073/Pnas.1718635115  0.569
2018 Friedman ES, Shen TD, Li Y, Jiang J, Chau L, Adorini L, Babakhani F, Edwards JE, Zhao C, Bittinger K, Li H, Wu GD. 299 - FXR-Dependent Modification of the Human Small Intestinal Microbiome Gastroenterology. 154: S-1084. DOI: 10.1016/S0016-5085(18)33612-6  0.565
2018 Firrman J, Friedman ES, Strange WC, Lee J, Bittinger K, Liu L, Wu GD. Mo1940 - Establishment of a Stable Human small Intestinal and Colonic Microbiota in an In Vitro Cultivar: Form vs. Function and Response to Oxygen Gastroenterology. 154: S-858-S-859. DOI: 10.1016/S0016-5085(18)32904-4  0.561
2017 Ni J, Shen TD, Chen EZ, Bittinger K, Bailey A, Roggiani M, Sirota-Madi A, Friedman ES, Chau L, Lin A, Nissim I, Scott J, Lauder A, Hoffmann C, Rivas G, et al. A role for bacterial urease in gut dysbiosis and Crohn's disease. Science Translational Medicine. 9. PMID 29141885 DOI: 10.1126/Scitranslmed.Aah6888  0.624
2017 Lewis JD, Chen EZ, Baldassano RN, Otley AR, Griffiths AM, Lee D, Bittinger K, Bailey A, Friedman ES, Hoffmann C, Albenberg L, Sinha R, Compher C, Gilroy E, Nessel L, et al. Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn's Disease. Cell Host & Microbe. 22: 247. PMID 28799909 DOI: 10.1016/j.chom.2017.07.011  0.531
2017 Ni J, Shen TD, Chen EZ, Bailey A, Roggiani M, Sirota-Madi A, Friedman ES, Chau L, Albenberg L, Baldassano RN, Braun J, Xavier R, Clish CB, Yudkoff M, Li H, et al. A Role for Bacterial Urease in Crohn's Disease and Gut Dysbiosis Gastroenterology. 152: S111. DOI: 10.1016/S0016-5085(17)30711-4  0.558
2017 Friedman ES, Esipova TV, Bittinger K, Hou L, Chau L, Jiang J, Mesaros C, Lund P, Liang X, FitzGerald G, Lee D, Blair IA, Garcia B, Vinogradov S, Wu GD. Origins of the Anaerobic Gut Lumen: Microbes vs. Chemistry Gastroenterology. 152: S33. DOI: 10.1016/S0016-5085(17)30474-2  0.588
2015 Friedman ES, McPhillips LE, Werner JJ, Poole AC, Ley RE, Walter MT, Angenent LT. Methane Emission in a Specific Riparian-Zone Sediment Decreased with Bioelectrochemical Manipulation and Corresponded to the Microbial Community Dynamics. Frontiers in Microbiology. 6: 1523. PMID 26793170 DOI: 10.3389/Fmicb.2015.01523  0.558
2015 Lewis JD, Chen EZ, Baldassano RN, Otley AR, Griffiths AM, Lee D, Bittinger K, Bailey A, Friedman ES, Hoffmann C, Albenberg L, Sinha R, Compher C, Gilroy E, Nessel L, et al. Inflammation, Antibiotics, and Diet as Environmental Stressors of the Gut Microbiome in Pediatric Crohn's Disease. Cell Host & Microbe. 18: 489-500. PMID 26468751 DOI: 10.1016/J.Chom.2015.09.008  0.587
2015 Miller KE, Lai CT, Friedman ES, Angenent LT, Lipson DA. Methane suppression by iron and humic acids in soils of the Arctic Coastal Plain Soil Biology and Biochemistry. 83: 176-183. DOI: 10.1016/J.Soilbio.2015.01.022  0.622
2013 Friedman ES, Miller KE, Lipson DA, Angenent LT. Potentiostatically poised electrodes mimic iron oxide and interact with soil microbial communities to alter the biogeochemistry of arctic peat soils Minerals. 3: 318-336. DOI: 10.3390/Min3030318  0.637
2012 Friedman ES, Rosenbaum MA, Lee AW, Lipson DA, Land BR, Angenent LT. A cost-effective and field-ready potentiostat that poises subsurface electrodes to monitor bacterial respiration. Biosensors & Bioelectronics. 32: 309-13. PMID 22209069 DOI: 10.1016/J.Bios.2011.12.013  0.642
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