P. Andrew (Andy) Karplus
Affiliations: | 1988-1998 | Biochemistry, Molecular and Cell Biology | Cornell University, Ithaca, NY, United States |
| 1998- | Biochemistry and Biophysics | Oregon State University, Corvallis, OR |
Area:
Protein crystallographyWebsite:
https://biochem.science.oregonstate.edu/content/p-andrew-karplusGoogle:
"P. Andrew Karplus" OR "Paul Andrew Karplus"Bio:
https://www.gf.org/fellows/all-fellows/p-andrew-karplus/
https://biochem.science.oregonstate.edu/sites/biochem.science.oregonstate.edu/files/PAKarplus-CV_august-2018.pdf
https://www.researchgate.net/profile/Paul_Karplus
https://scholar.google.com/citations?user=FUSWzfIAAAAJ&hl=en
Mean distance: (not calculated yet)
Parents
Sign in to add mentor| Jon Roger Herriott | grad student | 1978-1984 | University of Washington | |
| (The amino acid sequence of ferredoxin: NADP+ oxidoreductase and its relationship to the tertiary structure of the NADP domain at 3.25 Å) | ||||
| Kenneth A. Walsh | grad student | 1978-1984 | University of Washington | |
| (secondary advisor) | ||||
| Georg E. Schulz | post-doc | 1984-1988 | Universität Freiburg | |
| (postdoc mentor) | ||||
Children
Sign in to add trainee| Linda S Brinen | grad student | 1991-1993 | Cornell |
| Savvas N. Savvides | grad student | 1995-2000 | Cornell |
| Zachary A. Wood | grad student | 1996-2002 | Cornell |
| Donald S. Berkholz | grad student | 2009 | Oregon State |
| Arden Perkins | grad student | 2011-2015 | Oregon State (FlyTree) |
| Joshua Sakon | post-doc | 1993-1997 | Cornell |
| Casey M. Finnerty | post-doc | 1996-1998 | Cornell (Cell Biology Tree) |
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Publications
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| Debrine AM, Karplus PA, Rockey DD. (2023) A structural foundation for studying chlamydial polymorphic membrane proteins. Microbiology Spectrum. e0324223 |
| Gottfried-Lee I, Perona JJ, Karplus PA, et al. (2022) Structures of Pyrrolysine tRNA-Synthetases Support the Need for De Novo Selections When Altering the Substrate Specificity. Acs Chemical Biology |
| Aloi S, Davies CG, Karplus PA, et al. (2019) Substrate Specificity in Thiol Dioxygenases. Biochemistry. 58: 2398-2407 |
| Kean KM, Karplus PA. (2019) Structure and role for active site lid of lactate monooxygenase from Mycobacterium smegmatis. Protein Science : a Publication of the Protein Society. 28: 135-149 |
| Nelson KJ, Perkins A, Van Swearingen AE, et al. (2017) Experimentally Dissecting the Origins of Peroxiredoxin Catalysis. Antioxidants & Redox Signaling |
| Osborn AR, Kean KM, Alseud KM, et al. (2017) Evolution and Distribution of C7-Cyclitol Synthases in Prokaryotes and Eukaryotes. Acs Chemical Biology |
| Perkins A, Parsonage D, Nelson KJ, et al. (2016) Peroxiredoxin Catalysis at Atomic Resolution. Structure (London, England : 1993) |
| Driggers CM, Kean KM, Hirschberger LL, et al. (2016) Structure-based insights into the role of the Cys-Tyr crosslink and inhibitor-recognition by Mammalian Cysteine Dioxygenase. Journal of Molecular Biology |
| Hollingsworth SA, Lewis MC, Karplus PA. (2016) Beyond basins: φ,ψ preferences of a residue depend heavily on the φ,ψ values of its neighbors. Protein Science : a Publication of the Protein Society |
| Brereton AE, Karplus PA. (2016) On the reliability of peptide non-planarity seen in ultra-high resolution crystal structures. Protein Science : a Publication of the Protein Society |