Ellen V. Rothenberg

1982- Division of Biology California Institute of Technology, Pasadena, CA 
 2015- Division of Biology & Biological Engineering California Institute of Technology, Pasadena, CA 
Molecular Genetics, Developmental Biology, Immunology, Gene regulation, Systems Biology
"Ellen Rothenberg"



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Patricia M. White research assistant 1989-1991 Caltech (Neurotree)
Christopher B Franco research assistant 2002-2005 Caltech (Stem Cell Tree)
Kenneth K.H. Ng research assistant 2016 Caltech
Maile (Werner) Romero-Wolf research assistant 2015-2019 Caltech
Xun Wang grad student 2014- Caltech
Wen Zhou grad student 2015- Caltech
Thomas J. Novak grad student 1991 Caltech
Julia A. Yang-Snyder grad student 1998 Caltech
Luigi Warren grad student 2003 Caltech
Dan Chen grad student 2004 Caltech
Mark A. Zarnegar grad student 2010 Caltech
Jingli (A.) Zhang grad student 2012 Caltech
Marissa M. Del Real grad student 2013 Caltech
Boyoung Shin post-doc 2018- Caltech
Tom Sidwell post-doc 2019- Caltech
Jihyun Irizarry post-doc 2020- Caltech
Christine Kinnon post-doc 1987 Caltech
Kathleen L. McGuire post-doc 1987 Caltech (Chemistry Tree)
Susan Ward post-doc 1997 Caltech
Gabriela Hernandez-Hoyos post-doc 1996-1999 Caltech
Fei Chen post-doc 1995-2001 Caltech
Janice C. Telfer post-doc 1995-2001 Caltech
Michele K. Anderson post-doc 1996-2003 Caltech
Jing Chen post-doc 2001-2003 Caltech
Mary A. Yui post-doc 1997-2004 Caltech
Angela Weiss post-doc 2000-2004 Caltech
Elizabeth-Sharon David-Fung post-doc 2000-2005 Caltech
Satoko Adachi post-doc 2001-2005 Caltech
Tom (N.) Taghon post-doc 2002-2005 Caltech
Deirdre D. Scripture-Adams post-doc 2003-2006 Caltech (Microtree)
C. Chace Tydell post-doc 2002-2007 Caltech
Long Li post-doc 2006-2014 Caltech
Ameya Champhekar post-doc 2008-2015 Caltech
Hao Y. Kueh post-doc 2008-2016 Caltech
Hiroyuki Hosokawa post-doc 2018 Caltech
Jonas Ungerbäck post-doc 2018 Caltech
Rashmi Pant research scientist 2004 Caltech
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Hosokawa H, Koizumi M, Masuhara K, et al. (2021) Stage-specific action of Runx1 and GATA3 controls silencing of PU.1 expression in mouse pro-T cells. The Journal of Experimental Medicine. 218
Sidwell T, Rothenberg EV. (2021) Epigenetic Dynamics in the Function of T-Lineage Regulatory Factor Bcl11b. Frontiers in Immunology. 12: 669498
Shin B, Hosokawa H, Romero-Wolf M, et al. (2021) Runx1 and Runx3 drive progenitor to T-lineage transcriptome conversion in mouse T cell commitment via dynamic genomic site switching. Proceedings of the National Academy of Sciences of the United States of America. 118
Olariu V, Yui MA, Krupinski P, et al. (2021) Multi-scale Dynamical Modeling of T Cell Development from an Early Thymic Progenitor State to Lineage Commitment. Cell Reports. 34: 108622
Rothenberg EV, Göttgens B. (2020) How haematopoiesis research became a fertile ground for regulatory network biology as pioneered by Eric Davidson. Current Opinion in Hematology
Hosokawa H, Rothenberg EV. (2020) How transcription factors drive choice of the T cell fate. Nature Reviews. Immunology
Wang X, Rothenberg EV. (2020) Illuminating the core of adaptive immunity-how the regulatory genome controls chromatin dynamics. Science Immunology. 5
Romero-Wolf M, Shin B, Zhou W, et al. (2020) Notch2 complements Notch1 to mediate inductive signaling that initiates early T cell development. The Journal of Cell Biology. 219
Rothenberg EV. (2019) Dynamic control of the T-cell specification gene regulatory network. Current Opinion in Systems Biology. 18: 62-76
Zhou W, Rothenberg EV. (2019) Building a Human Thymus: A Pointillist View. Immunity. 51: 788-790
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