Roger P. Alexander

Affiliations: 
2003-2007 Georgia Institute of Technology, Atlanta, GA 
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"Roger Alexander"

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Igor B. Zhulin grad student 2003-2007 Georgia Tech
 (Evolutionary genomics of methyl -accepting chemotaxis proteins.)
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Publications

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Gerstein MB, Rozowsky J, Yan KK, et al. (2014) Comparative analysis of the transcriptome across distant species. Nature. 512: 445-8
Qian F, Chung L, Zheng W, et al. (2013) Identification of genes critical for resistance to infection by West Nile virus using RNA-Seq analysis. Viruses. 5: 1664-81
Gerstein MB, Lu ZJ, Van Nostrand EL, et al. (2010) Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project. Science (New York, N.Y.). 330: 1775-87
Alexander RP, Lowenthal AC, Harshey RM, et al. (2010) CheV: CheW-like coupling proteins at the core of the chemotaxis signaling network. Trends in Microbiology. 18: 494-503
Alexander RP, Fang G, Rozowsky J, et al. (2010) Annotating non-coding regions of the genome. Nature Reviews. Genetics. 11: 559-71
Yan KK, Fang G, Bhardwaj N, et al. (2010) Comparing genomes to computer operating systems in terms of the topology and evolution of their regulatory control networks. Proceedings of the National Academy of Sciences of the United States of America. 107: 9186-91
Yip KY, Alexander RP, Yan KK, et al. (2010) Improved reconstruction of in silico gene regulatory networks by integrating knockout and perturbation data. Plos One. 5: e8121
Alexander RP, Kim PM, Emonet T, et al. (2009) Understanding modularity in molecular networks requires dynamics. Science Signaling. 2: pe44
Wuichet K, Alexander RP, Zhulin IB. (2007) Comparative genomic and protein sequence analyses of a complex system controlling bacterial chemotaxis. Methods in Enzymology. 422: 1-31
Alexander RP, Zhulin IB. (2007) Evolutionary genomics reveals conserved structural determinants of signaling and adaptation in microbial chemoreceptors. Proceedings of the National Academy of Sciences of the United States of America. 104: 2885-90
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