Paul Thomas Spellman

2000 Stanford University, Palo Alto, CA 
"Paul Spellman"


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David Botstein grad student 2000 Stanford
 (Generating, analyzing, and storing genome scale data.)
Gerald M. Rubin post-doc 2000-2003 UC Berkeley and HHMI (FlyTree)


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Michael Heskett grad student 2016- OHSU
Timothy Butler grad student 2011-2016 OHSU
Asia Mitchell grad student 2012-2018 OHSU
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Gerstung M, Jolly C, Leshchiner I, et al. (2023) Author Correction: The evolutionary history of 2,658 cancers. Nature
Heskett MB, Vouzas AE, Smith LG, et al. (2022) Epigenetic control of chromosome-associated lncRNA genes essential for replication and stability. Nature Communications. 13: 6301
Johnson BE, Creason AL, Stommel JM, et al. (2022) An omic and multidimensional spatial atlas from serial biopsies of an evolving metastatic breast cancer. Cell Reports. Medicine. 3: 100525
Heskett MB, Spellman PT, Thayer MJ. (2021) Differential Allelic Expression among Long Non-Coding RNAs. Non-Coding Rna. 7
Boniface C, Deig C, Halsey C, et al. (2021) The Feasibility of Patient-Specific Circulating Tumor DNA Monitoring throughout Multi-Modality Therapy for Locally Advanced Esophageal and Rectal Cancer: A Potential Biomarker for Early Detection of Subclinical Disease. Diagnostics (Basel, Switzerland). 11
Naffar-Abu Amara S, Kuiken HJ, Selfors LM, et al. (2020) Transient commensal clonal interactions can drive tumor metastasis. Nature Communications. 11: 5799
Heskett M, Smith LG, Spellman P, et al. (2020) Reciprocal monoallelic expression of ASAR lncRNA genes controls replication timing of human chromosome 6. Rna (New York, N.Y.)
Gerstung M, Jolly C, Leshchiner I, et al. (2020) The evolutionary history of 2,658 cancers. Nature. 578: 122-128
Heskett MB, Sanborn JZ, Boniface C, et al. (2020) Multiregion exome sequencing of ovarian immature teratomas reveals 2N near-diploid genomes, paucity of somatic mutations, and extensive allelic imbalances shared across mature, immature, and disseminated components. Modern Pathology : An Official Journal of the United States and Canadian Academy of Pathology, Inc
Boniface C, Baker K, Dieg C, et al. (2020) Abstract PR05: Radiation-assisted Amplification Sequencing (RAMP-Seq): Evaluating the use of stereotactic body radiation therapy (SBRT) for enriching circulating tumor DNA in liquid biopsies Clinical Cancer Research. 26
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