| Year |
Citation |
Score |
| 2020 |
Bao R, Friedrich M. Genomic signatures of globally enhanced gene duplicate accumulation in the megadiverse higher Diptera fueling intralocus sexual conflict resolution. Peerj. 8: e10012. PMID 33083121 DOI: 10.7717/peerj.10012 |
0.513 |
|
| 2020 |
Wu M, Bao R, Friedrich M. Evolutionary conservation of opsin gene expression patterns in the compound eyes of darkling beetles. Development Genes and Evolution. PMID 33006642 DOI: 10.1007/s00427-020-00669-2 |
0.539 |
|
| 2020 |
Doo DW, Meza-Perez S, Londoño AI, Goldsberry WN, Katre AA, Boone JD, Moore DJ, Hudson CT, Betella I, McCaw TR, Gangrade A, Bao R, Luke JJ, Yang ES, Birrer MJ, et al. Inhibition of the Wnt/β-catenin pathway enhances antitumor immunity in ovarian cancer. Therapeutic Advances in Medical Oncology. 12: 1758835920913798. PMID 32313567 DOI: 10.1177/1758835920913798 |
0.343 |
|
| 2020 |
Bao R, Luke JJ. Abstract B04: Molecular correlates of the non-T cell-inflamed tumor microenvironment in head and neck squamous cell carcinoma Clinical Cancer Research. 26. DOI: 10.1158/1557-3265.Aacrahns19-B04 |
0.376 |
|
| 2019 |
Bao R, Onishi KG, Tolla E, Ebling FJP, Lewis JE, Anderson RL, Barrett P, Prendergast BJ, Stevenson TJ. Genome sequencing and transcriptome analyses of the Siberian hamster hypothalamus identify mechanisms for seasonal energy balance. Proceedings of the National Academy of Sciences of the United States of America. PMID 31189592 DOI: 10.1073/Pnas.1902896116 |
0.334 |
|
| 2019 |
Godfrey J, Tumuluru S, Bao R, Leukam M, Venkataraman G, Phillip J, Fitzpatrick C, McElherne J, MacNabb BW, Orlowski R, Smith SM, Kline J. PD-L1 gene alterations identify a subset of diffuse large B-cell lymphoma harboring a T cell-inflamed phenotype. Blood. PMID 30910787 DOI: 10.1182/Blood-2018-10-879015 |
0.31 |
|
| 2019 |
Johnson DB, Bao R, Ancell KK, Daniels AB, Wallace D, Sosman JA, Luke JJ. Response to Anti-PD-1 in Uveal Melanoma Without High-Volume Liver Metastasis. Journal of the National Comprehensive Cancer Network : Jnccn. 17: 114-117. PMID 30787124 DOI: 10.6004/Jnccn.2018.7070 |
0.3 |
|
| 2019 |
Luke JJ, Bao R, Sweis RF, Spranger S, Gajewski TF. WNT/β-catenin pathway activation correlates with immune exclusion across human cancers. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30635339 DOI: 10.1158/1078-0432.Ccr-18-1942 |
0.32 |
|
| 2019 |
Cheng H, Bao R, Waes CV, Saloura V. Abstract 5178: Genomic and transcriptomic alterations of chromatin factors in head and neck cancer Cancer Research. 79: 5178-5178. DOI: 10.1158/1538-7445.Sabcs18-5178 |
0.338 |
|
| 2018 |
Labadie BW, Bao R, Luke JJ. Reimagining IDO pathway inhibition in cancer immunotherapy via downstream focus on the tryptophan-kynurenine-aryl hydrocarbon axis. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 30377198 DOI: 10.1158/1078-0432.Ccr-18-2882 |
0.328 |
|
| 2018 |
Trujillo JA, Sweis RF, Bao R, Luke JJ. T Cell-Inflamed versus Non-T Cell-Inflamed Tumors: A Conceptual Framework for Cancer Immunotherapy Drug Development and Combination Therapy Selection. Cancer Immunology Research. 6: 990-1000. PMID 30181337 DOI: 10.1158/2326-6066.Cir-18-0277 |
0.336 |
|
| 2018 |
Shah S, Wood K, Labadie B, Won B, Brisson R, Karrison T, Hensing T, Kozloff M, Bao R, Patel JD, Luke JJ. Clinical and molecular features of innate and acquired resistance to anti-PD-1/PD-L1 therapy in lung cancer. Oncotarget. 9: 4375-4384. PMID 29435109 DOI: 10.18632/Oncotarget.23315 |
0.307 |
|
| 2018 |
Matson V, Fessler J, Bao R, Chongsuwat T, Zha Y, Alegre ML, Luke JJ, Gajewski TF. The commensal microbiome is associated with anti-PD-1 efficacy in metastatic melanoma patients. Science (New York, N.Y.). 359: 104-108. PMID 29302014 DOI: 10.1126/Science.Aao3290 |
0.337 |
|
| 2018 |
Bao R, Dia SE, Issa HA, Alhusein D, Friedrich M. Comparative Evidence of an Exceptional Impact of Gene Duplication on the Developmental Evolution of Drosophila and the Higher Diptera Frontiers in Ecology and Evolution. 6. DOI: 10.3389/Fevo.2018.00063 |
0.579 |
|
| 2018 |
Godfrey JK, Smith SM, Tumuluru S, Kline JP, McElherne J, Venkataraman G, Bao R. Pd-l1 gene alterations to identify a subset of diffuse large B cell lymphoma that harbor a T cell inflamed phenotype. Journal of Clinical Oncology. 36: 7566-7566. DOI: 10.1200/Jco.2018.36.15_Suppl.7566 |
0.337 |
|
| 2018 |
Kline JP, Godfrey J, Tumuluru S, Venkataraman G, Bao R, Smith SM. Abstract 699: Pd-l1 gene alterations identify a subset of diffuse large B cell lymphoma harboring a T cell inflamed phenotype Cancer Research. 78: 699-699. DOI: 10.1158/1538-7445.Am2018-699 |
0.317 |
|
| 2018 |
Olson B, Bao R, Fessler J, Luke J, Gajewski TF, Patnaik A. Abstract 5737: Genomic drivers of cancer are enriched and mutually exclusive within non-T cell-inflamed tumors Immunology. DOI: 10.1158/1538-7445.Am2018-5737 |
0.331 |
|
| 2018 |
Ludwig LM, Roach LE, Katz SG, Fisher JK, Burns M, Schnorenberg MR, Bao R, Zewde M, Nakamura Y, Gutierrez A, Walensky LD, LaBelle JL. Abstract 294: BCL-2 family compensation regulates T cell homeostasis and reveals a BIM:BCL-W axis in T-ALL Cancer Research. 78: 294-294. DOI: 10.1158/1538-7445.Am2018-294 |
0.308 |
|
| 2017 |
Vougiouklakis T, Bao R, Nakamura Y, Saloura V. Protein methyltransferases and demethylases dictate CD8+ T-cell exclusion in squamous cell carcinoma of the head and neck. Oncotarget. 8: 112797-112808. PMID 29348866 DOI: 10.18632/Oncotarget.22627 |
0.31 |
|
| 2017 |
Saloura V, Fatima A, Zewde M, Kiyotani K, Brisson RJ, Park JH, Ikeda Y, Vougiouklakis T, Bao R, Seiwert TY, Cipriani NA, Lingen MW, Vokes EE, Nakamura Y. Characterization of the tumor T-cell receptor repertoire and immune microenvironment in patients with locoregionally advanced squamous cell carcinoma of the head and neck. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 28442504 DOI: 10.1158/1078-0432.CCR-17-0103 |
0.309 |
|
| 2017 |
Maron SB, Luke JJ, Hovey R, Bao R, Gajewski T, Ji Y, Catenacci DV. Identification of T-cell-inflamed gastric adenocarcinoma in The Cancer Genome Atlas (TCGA). Journal of Clinical Oncology. 35: 16-16. DOI: 10.1200/Jco.2017.35.7_Suppl.16 |
0.369 |
|
| 2017 |
Seiwert TY, Bao R, Tan YC, Acharya R, Brisson RJ, Kochanny S, Arshad S, Zuo Z, Saloura V, Agrawal N, Gooi Z, Blair EA, Lingen MW, Vokes EE, Gajewski T, et al. Correlation of constitutive PD-1 resistance in HNC with GM-CSF expression and presence of myeloid derived suppressor cells (MDSCs). Journal of Clinical Oncology. 35: 6049-6049. DOI: 10.1200/Jco.2017.35.15_Suppl.6049 |
0.351 |
|
| 2016 |
Spranger S, Luke JJ, Bao R, Zha Y, Hernandez KM, Li Y, Gajewski AP, Andrade J, Gajewski TF. Density of immunogenic antigens does not explain the presence or absence of the T-cell-inflamed tumor microenvironment in melanoma. Proceedings of the National Academy of Sciences of the United States of America. PMID 27837020 DOI: 10.1073/Pnas.1609376113 |
0.359 |
|
| 2016 |
Shah S, Ward JE, Bao R, Hall CR, Brockstein BE, Luke JJ. Clinical response of a patient to anti-PD-1 immunotherapy and the immune landscape of testicular germ cell tumors. Cancer Immunology Research. PMID 27638840 DOI: 10.1158/2326-6066.Cir-16-0087 |
0.369 |
|
| 2016 |
Sweis RF, Spranger S, Bao R, Paner GP, Stadler WM, Steinberg GD, Gajewski TF. Molecular Drivers of the Non-T Cell-Inflamed Tumor Microenvironment in Urothelial Bladder Cancer. Cancer Immunology Research. PMID 27197067 DOI: 10.1158/2326-6066.Cir-15-0274 |
0.369 |
|
| 2016 |
Sweis RF, Bao R, Spranger S, Paner G, Stadler WM, Steinberg GD, Gajewski T. Validation of activated molecular pathways in non-T cell-inflamed urothelial bladder cancer (UBC). Journal of Clinical Oncology. 34: e23114-e23114. DOI: 10.1200/Jco.2016.34.15_Suppl.E23114 |
0.312 |
|
| 2016 |
Shah S, Ward JE, Bao R, Brockstein B, Luke JJ. Clinical response to anti-PD1 immunotherapy in a patient with non-seminomatous germ cell tumor and evaluation of the immune landscape in testicular cancer. Journal of Clinical Oncology. 34: e16040-e16040. DOI: 10.1200/Jco.2016.34.15_Suppl.E16040 |
0.328 |
|
| 2016 |
Luke JJ, Bao R, Spranger S, Sweis RF, Gajewski T. Correlation of WNT/β-catenin pathway activation with immune exclusion across most human cancers. Journal of Clinical Oncology. 34: 3004-3004. DOI: 10.1200/Jco.2016.34.15_Suppl.3004 |
0.389 |
|
| 2015 |
Zhong R, Bao R, Faber PW, Bindokas VP, Bechill J, Lingen MW, Spiotto MT. Notch1 Activation or Loss Promotes HPV-Induced Oral Tumorigenesis. Cancer Research. 75: 3958-69. PMID 26294213 DOI: 10.1158/0008-5472.Can-15-0199 |
0.329 |
|
| 2015 |
Sasaki MM, Skol AD, Bao R, Rhodes LV, Chambers R, Vokes EE, Cohen EE, Onel K. Integrated Genomic Analysis Suggests MLL3 Is a Novel Candidate Susceptibility Gene for Familial Nasopharyngeal Carcinoma. Cancer Epidemiology, Biomarkers & Prevention : a Publication of the American Association For Cancer Research, Cosponsored by the American Society of Preventive Oncology. PMID 26014803 DOI: 10.1158/1055-9965.Epi-15-0275 |
0.346 |
|
| 2015 |
Spranger S, Bao R, Gajewski TF. Melanoma-intrinsic β-catenin signalling prevents anti-tumour immunity. Nature. 523: 231-5. PMID 25970248 DOI: 10.1038/Nature14404 |
0.339 |
|
| 2015 |
Zhao C, Escalante LN, Chen H, Benatti TR, Qu J, Chellapilla S, Waterhouse RM, Wheeler D, Andersson MN, Bao R, Batterton M, Behura SK, Blankenburg KP, Caragea D, Carolan JC, et al. A massive expansion of effector genes underlies gall-formation in the wheat pest Mayetiola destructor. Current Biology : Cb. 25: 613-20. PMID 25660540 DOI: 10.1016/J.Cub.2014.12.057 |
0.545 |
|
| 2015 |
Gajewski T, Zha Y, Hernandez K, Li Y, Bao R, Alexieff P, Andrade J, Luke JJ, Spranger S. Density of immunogenic antigens and presence or absence of the T cell-inflamed tumor microenvironment in metastatic melanoma. Journal of Clinical Oncology. 33: 3002-3002. DOI: 10.1200/Jco.2015.33.15_Suppl.3002 |
0.351 |
|
| 2015 |
Luke JJ, Spranger S, Bao R, Andrade J, Gajewski TF. The genetic landscape of the T cell non-inflamed tumor microenvironment in human solid tumors Journal For Immunotherapy of Cancer. 3. DOI: 10.1186/2051-1426-3-S2-P97 |
0.316 |
|
| 2015 |
Zha Y, Spranger S, Hernandez KM, Li Y, Bao R, Alexieff P, Andrade J, Luke JJ, Gajewski TF. Density of immunogenic antigens does not explain presence or absence of the T cell-inflamed tumor microenvironment in metastatic melanoma Journal For Immunotherapy of Cancer. 3. DOI: 10.1186/2051-1426-3-S2-P425 |
0.319 |
|
| 2014 |
Bao R, Huang L, Andrade J, Tan W, Kibbe WA, Jiang H, Feng G. Review of current methods, applications, and data management for the bioinformatics analysis of whole exome sequencing. Cancer Informatics. 13: 67-82. PMID 25288881 DOI: 10.4137/Cin.S13779 |
0.307 |
|
| 2014 |
Spranger S, Bao R, Gajewski T. Melanoma-intrinsic β-catenin signaling prevents T cell infiltration and anti-tumor immunity Journal For Immunotherapy of Cancer. 2. DOI: 10.1186/2051-1426-2-S3-O15 |
0.348 |
|
| 2012 |
Ansari NA, Bao R, Voichiţa C, Drăghici S. Detecting phenotype-specific interactions between biological processes from microarray data and annotations. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 9: 1399-409. PMID 22547431 DOI: 10.1109/Tcbb.2012.65 |
0.304 |
|
| 2012 |
Bao R, Fischer T, Bolognesi R, Brown SJ, Friedrich M. Parallel duplication and partial subfunctionalization of β-catenin/armadillo during insect evolution. Molecular Biology and Evolution. 29: 647-62. PMID 21890476 DOI: 10.1093/Molbev/Msr219 |
0.526 |
|
| 2011 |
Friedrich M, Chen R, Daines B, Bao R, Caravas J, Rai PK, Zagmajster M, Peck SB. Phototransduction and clock gene expression in the troglobiont beetle Ptomaphagus hirtus of Mammoth cave. The Journal of Experimental Biology. 214: 3532-41. PMID 21993781 DOI: 10.1242/Jeb.060368 |
0.726 |
|
| 2011 |
Zarinkamar N, Yang X, Bao R, Friedrich F, Beutel R, Friedrich M. The Pax gene eyegone facilitates repression of eye development in Tribolium. Evodevo. 2: 8. PMID 21463500 DOI: 10.1186/2041-9139-2-8 |
0.644 |
|
| 2009 |
Yang X, Zarinkamar N, Bao R, Friedrich M. Probing the Drosophila retinal determination gene network in Tribolium (I): The early retinal genes dachshund, eyes absent and sine oculis. Developmental Biology. 333: 202-14. PMID 19324029 DOI: 10.1016/J.Ydbio.2009.02.040 |
0.642 |
|
| 2009 |
Bao R, Friedrich M. Molecular evolution of the Drosophila retinome: exceptional gene gain in the higher Diptera. Molecular Biology and Evolution. 26: 1273-87. PMID 19252076 DOI: 10.1093/Molbev/Msp039 |
0.595 |
|
| 2008 |
Sharma V, Swaminathan A, Bao R, Pile LA. Drosophila SIN3 is required at multiple stages of development. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 237: 3040-50. PMID 18816856 DOI: 10.1002/Dvdy.21706 |
0.306 |
|
| 2008 |
Bao R, Friedrich M. Conserved cluster organization of insect Runx genes. Development Genes and Evolution. 218: 567-74. PMID 18758811 DOI: 10.1007/S00427-008-0244-X |
0.569 |
|
| 2008 |
Bao R, Friedrich M. Fast co-evolution of sevenless and bride of sevenless in endopterygote insects. Development Genes and Evolution. 218: 215-20. PMID 18392882 DOI: 10.1007/S00427-007-0201-0 |
0.527 |
|
| 2008 |
Richards S, Gibbs RA, Weinstock GM, Brown SJ, Denell R, Beeman RW, Gibbs R, Beeman RW, Brown SJ, Bucher G, Friedrich M, Grimmelikhuijzen CJ, Klingler M, Lorenzen M, ... ... Bao R, et al. The genome of the model beetle and pest Tribolium castaneum. Nature. 452: 949-55. PMID 18362917 DOI: 10.1038/Nature06784 |
0.657 |
|
| 2007 |
Jackowska M, Bao R, Liu Z, McDonald EC, Cook TA, Friedrich M. Genomic and gene regulatory signatures of cryptozoic adaptation: Loss of blue sensitive photoreceptors through expansion of long wavelength-opsin expression in the red flour beetle Tribolium castaneum. Frontiers in Zoology. 4: 24. PMID 18154648 DOI: 10.1186/1742-9994-4-24 |
0.572 |
|
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