Abhishek Jha, Ph.D. - Publications

Affiliations: 
2007 University of Chicago, Chicago, IL 
Area:
statistical mechanics of polymers in the liquid phase, protein dynamics aggregation, and folding, equilibrium aggregation phenomena, and molecular electronic structure

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Austin JM, Jha AK, Romano PS, Singer SJ, Vogus TJ, Wachter RM, Pronovost PJ. National hospital ratings systems share few common scores and may generate confusion instead of clarity. Health Affairs (Project Hope). 34: 423-30. PMID 25732492 DOI: 10.1377/Hlthaff.2014.0201  0.401
2012 Baxa MC, Haddadian EJ, Jha AK, Freed KF, Sosnick TR. Context and force field dependence of the loss of protein backbone entropy upon folding using realistic denatured and native state ensembles. Journal of the American Chemical Society. 134: 15929-36. PMID 22928488 DOI: 10.1021/Ja3064028  0.413
2012 Debartolo J, Jha A, Freed KF, Sosnick TR. Local Backbone Preferences and Nearest-Neighbor Effects in the Unfolded and Native States Protein and Peptide Folding, Misfolding, and Non-Folding. 79-98. DOI: 10.1002/9781118183373.ch3  0.356
2011 Haddadian EJ, Gong H, Jha AK, Yang X, Debartolo J, Hinshaw JR, Rice PA, Sosnick TR, Freed KF. Automated real-space refinement of protein structures using a realistic backbone move set. Biophysical Journal. 101: 899-909. PMID 21843481 DOI: 10.1016/J.Bpj.2011.06.063  0.596
2009 DeBartolo J, Colubri A, Jha AK, Fitzgerald JE, Freed KF, Sosnick TR. Mimicking the folding pathway to improve homology-free protein structure prediction. Proceedings of the National Academy of Sciences of the United States of America. 106: 3734-9. PMID 19237560 DOI: 10.1073/Pnas.0811363106  0.456
2008 Kent A, Jha AK, Fitzgerald JE, Freed KF. Benchmarking implicit solvent folding simulations of the amyloid β(10-35) fragment Journal of Physical Chemistry B. 112: 6175-6186. PMID 18348560 DOI: 10.1021/Jp077099H  0.405
2008 Jha AK, Freed KF. Solvation effect on conformations of 1,2:dimethoxyethane: Charge-dependent nonlinear response in implicit solvent models Journal of Chemical Physics. 128. PMID 18205504 DOI: 10.1063/1.2815764  0.385
2007 Fitzgerald JE, Jha AK, Colubri A, Sosnick TR, Freed KF. Reduced C(beta) statistical potentials can outperform all-atom potentials in decoy identification. Protein Science : a Publication of the Protein Society. 16: 2123-39. PMID 17893359 DOI: 10.1110/Ps.072939707  0.39
2007 Fitzgerald JE, Jha AK, Sosnick TR, Freed KF. Polypeptide motions are dominated by peptide group oscillations resulting from dihedral angle correlations between nearest neighbors. Biochemistry. 46: 669-82. PMID 17223689 DOI: 10.1021/Bi061575X  0.365
2006 Colubri A, Jha AK, Shen MY, Sali A, Berry RS, Sosnick TR, Freed KF. Minimalist representations and the importance of nearest neighbor effects in protein folding simulations. Journal of Molecular Biology. 363: 835-57. PMID 16982067 DOI: 10.1016/J.Jmb.2006.08.035  0.579
2006 Pandit AD, Jha A, Freed KF, Sosnick TR. Small proteins fold through transition states with native-like topologies. Journal of Molecular Biology. 361: 755-70. PMID 16876194 DOI: 10.1016/J.Jmb.2006.06.041  0.495
2005 Jha AK, Colubri A, Freed KF, Sosnick TR. Statistical coil model of the unfolded state: resolving the reconciliation problem. Proceedings of the National Academy of Sciences of the United States of America. 102: 13099-104. PMID 16131545 DOI: 10.1073/Pnas.0506078102  0.444
2005 Jha AK, Colubri A, Zaman MH, Koide S, Sosnick TR, Freed KF. Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library. Biochemistry. 44: 9691-702. PMID 16008354 DOI: 10.1021/Bi0474822  0.402
1999 Datta SN, Nehra V, Jha A. Electronic Structure of a Rieske Iron−Sulfur Complex and the Calculation of Its Reduction Potential The Journal of Physical Chemistry B. 103: 8768-8772. DOI: 10.1021/Jp991758B  0.327
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