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Matthew B. Friedersdorf, Ph.D. - Publications

Affiliations: 
2011 Molecular Cancer Biology Duke University, Durham, NC 
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11/12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ruthig VA, Hatkevich T, Hardy J, Friedersdorf MB, Mayère C, Nef S, Keene JD, Capel B. The RNA binding protein DND1 is elevated in a subpopulation of pro-spermatogonia and targets chromatin modifiers and translational machinery during late gestation. Plos Genetics. 19: e1010656. PMID 36857387 DOI: 10.1371/journal.pgen.1010656  0.679
2021 Ruthig VA, Yokonishi T, Friedersdorf MB, Batchvarova S, Hardy J, Garness JA, Keene JD, Capel B. A transgenic DND1GFP fusion allele reports in vivo expression and RNA binding targets in undifferentiated mouse germ cells. Biology of Reproduction. PMID 33394034 DOI: 10.1093/biolre/ioaa233  0.649
2019 Ruthig VA, Friedersdorf MB, Garness JA, Munger SC, Bunce C, Keene JD, Capel B. The RNA-binding protein DND1 acts Sequentially as a negative regulator of pluripotency and a positive regulator of epigenetic modifiers required for germ cell reprogramming. Development (Cambridge, England). PMID 31253634 DOI: 10.1242/Dev.175950  0.635
2018 Bisogno LS, Friedersdorf MB, Keene JD. Ras Post-transcriptionally Enhances a Pre-malignantly Primed EMT to Promote Invasion. Iscience. 4: 97-108. PMID 30240757 DOI: 10.1016/J.Isci.2018.05.011  0.59
2018 Wang S, Jung Y, Hyun J, Friedersdorf M, Oh SH, Kim J, Premont RT, Keene JD, Diehl AM. RNA Binding Proteins Control Transdifferentiation of Hepatic Stellate Cells into Myofibroblasts. Cellular Physiology and Biochemistry : International Journal of Experimental Cellular Physiology, Biochemistry, and Pharmacology. 48: 1215-1229. PMID 30045014 DOI: 10.1159/000491987  0.701
2016 Nicholson CO, Friedersdorf MB, Bisogno LS, Keene JD. DO-RIP-seq to quantify RNA binding sites transcriptome-wide. Methods (San Diego, Calif.). PMID 27840290 DOI: 10.1016/J.Ymeth.2016.11.004  0.685
2016 Nicholson CO, Friedersdorf MB, Keene JD. Quantifying RNA binding sites transcriptome-wide using DO-RIP-seq. Rna (New York, N.Y.). PMID 27742911 DOI: 10.1261/Rna.058115.116  0.639
2016 Smola MJ, Christy TW, Inoue K, Nicholson CO, Friedersdorf M, Keene JD, Lee DM, Calabrese JM, Weeks KM. SHAPE reveals transcript-wide interactions, complex structural domains, and protein interactions across the Xist lncRNA in living cells. Proceedings of the National Academy of Sciences of the United States of America. PMID 27578869 DOI: 10.1073/Pnas.1600008113  0.677
2014 Friedersdorf MB, Keene JD. Advancing the functional utility of PAR-CLIP by quantifying background binding to mRNAs and lncRNAs. Genome Biology. 15: R2. PMID 24393468 DOI: 10.1186/Gb-2014-15-1-R2  0.702
2009 Mukherjee N, Lager PJ, Friedersdorf MB, Thompson MA, Keene JD. Coordinated posttranscriptional mRNA population dynamics during T-cell activation. Molecular Systems Biology. 5: 288. PMID 19638969 DOI: 10.1038/Msb.2009.44  0.547
2006 Keene JD, Komisarow JM, Friedersdorf MB. RIP-Chip: the isolation and identification of mRNAs, microRNAs and protein components of ribonucleoprotein complexes from cell extracts. Nature Protocols. 1: 302-7. PMID 17406249 DOI: 10.1038/Nprot.2006.47  0.695
Low-probability matches (unlikely to be authored by this person)
2021 Friedersdorf M, Diehl AM. Inflammation Writes the Fibrogenic Code. Cellular and Molecular Gastroenterology and Hepatology. 12: 1147-1148. PMID 34224680 DOI: 10.1016/j.jcmgh.2021.06.012  0.021
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