Year |
Citation |
Score |
2023 |
Kina E, Laverdure JP, Durette C, Lanoix J, Courcelles M, Zhao Q, Apavaloaei A, Larouche JD, Hardy MP, Vincent K, Gendron P, Hesnard L, Thériault C, Ruiz Cuevas MV, Ehx G, et al. Breast cancer immunopeptidomes contain numerous shared tumor antigens. The Journal of Clinical Investigation. PMID 37906288 DOI: 10.1172/JCI166740 |
0.459 |
|
2023 |
Li C, Boutet A, Pascariu CM, Nelson T, Courcelles M, Wu Z, Comtois-Marotte S, Emery G, Thibault P. SUMO Proteomics Analyses Identify Protein Inhibitor of Activated STAT-Mediated Regulatory Networks Involved in Cell Cycle and Cell Proliferation. Journal of Proteome Research. PMID 36723483 DOI: 10.1021/acs.jproteome.2c00557 |
0.485 |
|
2022 |
Apavaloaei A, Hesnard L, Hardy MP, Benabdallah B, Ehx G, Thériault C, Laverdure JP, Durette C, Lanoix J, Courcelles M, Noronha N, Chauhan KD, Lemieux S, Beauséjour C, Bhatia M, et al. Induced pluripotent stem cells display a distinct set of MHC I-associated peptides shared by human cancers. Cell Reports. 40: 111241. PMID 35977509 DOI: 10.1016/j.celrep.2022.111241 |
0.485 |
|
2022 |
Bouayad-Gervais S, St-Cyr DJ, Courcelles M, Bonneil É, Gohard FH, Thibault P, Earnshaw WC, Tyers M. Head-to-tail cyclization of side chain-protected linear peptides to recapitulate genetically-encoded cyclized peptides. Peptide Science (Hoboken, N.J.). 114: e24254. PMID 35864841 DOI: 10.1002/pep2.24254 |
0.526 |
|
2022 |
Cleyle J, Hardy MP, Minati R, Courcelles M, Durette C, Lanoix J, Laverdure JP, Vincent K, Perreault C, Thibault P. Immunopeptidomic analyses of colorectal cancers with and without microsatellite instability. Molecular & Cellular Proteomics : McP. 100228. PMID 35367648 DOI: 10.1016/j.mcpro.2022.100228 |
0.493 |
|
2021 |
Kovalchik KA, Ma Q, Wessling L, Saab F, Despault J, Kubiniok P, Hamelin DJ, Faridi P, Li C, Purcell AW, Jang A, Paramithiotis E, Tognetti M, Reiter L, Bruderer R, ... ... Courcelles M, et al. MhcVizPipe: A Quality Control Software for Rapid Assessment of Small- to Large-Scale Immunopeptidome Data Sets. Molecular & Cellular Proteomics : McP. 100178. PMID 34798331 DOI: 10.1016/j.mcpro.2021.100178 |
0.618 |
|
2021 |
Daouda T, Dumont-Lagacé M, Feghaly A, Benslimane Y, Panes R, Courcelles M, Benhammadi M, Harrington L, Thibault P, Major F, Bengio Y, Gagnon É, Lemieux S, Perreault C. CAMAP: Artificial neural networks unveil the role of codon arrangement in modulating MHC-I peptides presentation. Plos Computational Biology. 17: e1009482. PMID 34679099 DOI: 10.1371/journal.pcbi.1009482 |
0.443 |
|
2021 |
Ruiz Cuevas MV, Hardy MP, Hollý J, Bonneil É, Durette C, Courcelles M, Lanoix J, Côté C, Staudt LM, Lemieux S, Thibault P, Perreault C, Yewdell JW. Most non-canonical proteins uniquely populate the proteome or immunopeptidome. Cell Reports. 34: 108815. PMID 33691108 DOI: 10.1016/j.celrep.2021.108815 |
0.525 |
|
2020 |
Pfammatter S, Bonneil E, Lanoix J, Vincent K, Hardy MP, Courcelles M, Perreault C, Thibault P. Extending the Comprehensiveness of Immunopeptidome Analyses Using Isobaric Peptide Labeling. Analytical Chemistry. PMID 32502341 DOI: 10.1021/Acs.Analchem.0C01545 |
0.596 |
|
2020 |
Courcelles M, Durette C, Daouda T, Laverdure JP, Vincent K, Lemieux S, Perreault C, Thibault P. MAPDP: a cloud-based computational platform for immunopeptidomics analyses. Journal of Proteome Research. PMID 32108478 DOI: 10.1021/Acs.Jproteome.9B00859 |
0.592 |
|
2020 |
Zhao Q, Laverdure JP, Lanoix J, Durette C, Coté C, Bonneil E, Laumont CM, Gendron P, Vincent K, Courcelles M, Lemieux S, Millar DG, Ohashi PS, Thibault P, Perreault C. Proteogenomics uncovers a vast repertoire of shared tumor-specific antigens in ovarian cancer. Cancer Immunology Research. PMID 32047025 DOI: 10.1158/2326-6066.Cir-19-0541 |
0.494 |
|
2019 |
Hébert S, Mathieu M, Henault D, Marques M, Audemard É, Courcelles M, Brown SD, Wirapati P, Tejpar S, D'Angelica MI, Holt RA, Mader S, Thibault P, Batist G, Kleinman C, et al. Abstract 579: Immune features and neoantigen recognition in mismatch repair-proficient colorectal cancer liver metastases Immunology. DOI: 10.1158/1538-7445.Sabcs18-579 |
0.432 |
|
2018 |
Laumont CM, Vincent K, Hesnard L, Audemard É, Bonneil É, Laverdure JP, Gendron P, Courcelles M, Hardy MP, Côté C, Durette C, St-Pierre C, Benhammadi M, Lanoix J, Vobecky S, et al. Noncoding regions are the main source of targetable tumor-specific antigens. Science Translational Medicine. 10. PMID 30518613 DOI: 10.1126/Scitranslmed.Aau5516 |
0.513 |
|
2018 |
Lanoix J, Durette C, Courcelles M, Cossette É, Comtois-Marotte S, Hardy MP, Côté C, Perreault C, Thibault P. Comparison of the MHC I Immunopeptidome Repertoire of B-Cell Lymphoblasts using Two Isolation Methods. Proteomics. PMID 29508533 DOI: 10.1002/Pmic.201700251 |
0.578 |
|
2017 |
Shao W, Pedrioli PGA, Wolski W, Scurtescu C, Schmid E, Vizcaíno JA, Courcelles M, Schuster H, Kowalewski D, Marino F, Arlehamn CSL, Vaughan K, Peters B, Sette A, Ottenhoff THM, et al. The SysteMHC Atlas project. Nucleic Acids Research. PMID 28985418 DOI: 10.1093/Nar/Gkx664 |
0.674 |
|
2017 |
Courcelles M, Coulombe-Huntington J, Cossette É, Gingras AC, Thibault P, Tyers M. CLMSVault: a software suite for protein cross-linking mass spectrometry data analysis and visualization. Journal of Proteome Research. PMID 28537071 DOI: 10.1021/Acs.Jproteome.7B00205 |
0.573 |
|
2016 |
Pearson H, Daouda T, Granados DP, Durette C, Bonneil E, Courcelles M, Rodenbrock A, Laverdure JP, Côté C, Mader S, Lemieux S, Thibault P, Perreault C. MHC class I-associated peptides derive from selective regions of the human genome. The Journal of Clinical Investigation. PMID 27841757 DOI: 10.1172/Jci88590 |
0.542 |
|
2016 |
Bachmann VA, Mayrhofer JE, Ilouz R, Tschaikner P, Raffeiner P, Röck R, Courcelles M, Apelt F, Lu TW, Baillie GS, Thibault P, Aanstad P, Stelzl U, Taylor SS, Stefan E. Gpr161 anchoring of PKA consolidates GPCR and cAMP signaling. Proceedings of the National Academy of Sciences of the United States of America. PMID 27357676 DOI: 10.1073/Pnas.1608061113 |
0.537 |
|
2013 |
Courcelles M, Frémin C, Voisin L, Lemieux S, Meloche S, Thibault P. Phosphoproteome dynamics reveal novel ERK1/2 MAP kinase substrates with broad spectrum of functions. Molecular Systems Biology. 9: 669. PMID 23712012 DOI: 10.1038/Msb.2013.25 |
0.523 |
|
2012 |
Courcelles M, Bridon G, Lemieux S, Thibault P. Occurrence and detection of phosphopeptide isomers in large-scale phosphoproteomics experiments. Journal of Proteome Research. 11: 3753-65. PMID 22668510 DOI: 10.1021/Pr300229M |
0.7 |
|
2011 |
Freschi L, Courcelles M, Thibault P, Michnick SW, Landry CR. Phosphorylation network rewiring by gene duplication. Molecular Systems Biology. 7: 504. PMID 21734643 DOI: 10.1038/Msb.2011.43 |
0.515 |
|
2011 |
Courcelles M, Lemieux S, Voisin L, Meloche S, Thibault P. ProteoConnections: a bioinformatics platform to facilitate proteome and phosphoproteome analyses. Proteomics. 11: 2654-71. PMID 21630457 DOI: 10.1002/Pmic.201000776 |
0.595 |
|
2011 |
Galisson F, Mahrouche L, Courcelles M, Bonneil E, Meloche S, Chelbi-Alix MK, Thibault P. A novel proteomics approach to identify SUMOylated proteins and their modification sites in human cells. Molecular & Cellular Proteomics : McP. 10: M110.004796. PMID 21098080 DOI: 10.1074/Mcp.M110.004796 |
0.613 |
|
2009 |
Trost M, English L, Lemieux S, Courcelles M, Desjardins M, Thibault P. The phagosomal proteome in interferon-gamma-activated macrophages. Immunity. 30: 143-54. PMID 19144319 DOI: 10.1016/J.Immuni.2008.11.006 |
0.52 |
|
2009 |
Gharib M, Marcantonio M, Lehmann SG, Courcelles M, Meloche S, Verreault A, Thibault P. Artifactual sulfation of silver-stained proteins: implications for the assignment of phosphorylation and sulfation sites. Molecular & Cellular Proteomics : McP. 8: 506-18. PMID 18936056 DOI: 10.1074/Mcp.M800327-Mcp200 |
0.58 |
|
2008 |
Marcantonio M, Trost M, Courcelles M, Desjardins M, Thibault P. Combined enzymatic and data mining approaches for comprehensive phosphoproteome analyses: application to cell signaling events of interferon-gamma-stimulated macrophages. Molecular & Cellular Proteomics : McP. 7: 645-60. PMID 18006492 DOI: 10.1074/Mcp.M700383-Mcp200 |
0.601 |
|
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