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Ganesh Sriram, Ph.D. - Publications

Affiliations: 
2004 Iowa State University, Ames, IA, United States 
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Moiz B, Sriram G, Clyne AM. Interpreting metabolic complexity via isotope-assisted metabolic flux analysis. Trends in Biochemical Sciences. PMID 36863894 DOI: 10.1016/j.tibs.2023.02.001  0.476
2022 Moiz B, Li A, Padmanabhan S, Sriram G, Clyne AM. Isotope-Assisted Metabolic Flux Analysis: A Powerful Technique to Gain New Insights into the Human Metabolome in Health and Disease. Metabolites. 12. PMID 36355149 DOI: 10.3390/metabo12111066  0.459
2021 Moiz B, Garcia J, Basehore S, Sun A, Li A, Padmanabhan S, Albus K, Jang C, Sriram G, Clyne AM. C Metabolic Flux Analysis Indicates Endothelial Cells Attenuate Metabolic Perturbations by Modulating TCA Activity. Metabolites. 11. PMID 33917224 DOI: 10.3390/metabo11040226  0.452
2021 Mack SG, Sriram G. NetFlow: A tool for isolating carbon flows in genome-scale metabolic networks. Metabolic Engineering Communications. 12: e00154. PMID 33489751 DOI: 10.1016/j.mec.2020.e00154  0.43
2020 Chung J, Sriram G, Keefer CL. Nanoparticle technology improves in-vitro attachment of cattle (Bos taurus) trophectoderm cells. Biotechnology Letters. PMID 32494995 DOI: 10.1007/S10529-020-02926-W  0.311
2018 Parr LS, Sriram G, Nazarian R, Rahib L, Dipple KM. The ATP-stimulated translocation promoter (ASTP) activity of glycerol kinase plays central role in adipogenesis. Molecular Genetics and Metabolism. PMID 29960856 DOI: 10.1016/J.Ymgme.2018.06.001  0.469
2017 Zhang X, Misra A, Nargund S, Coleman GD, Sriram G. Concurrent isotope-assisted metabolic flux analysis and transcriptome profiling reveal responses of poplar cells to altered nitrogen and carbon supply. The Plant Journal : For Cell and Molecular Biology. PMID 29193384 DOI: 10.1111/Tpj.13792  0.561
2015 Ho CK, Rahib L, Liao JC, Sriram G, Dipple KM. Mathematical modeling of the insulin signal transduction pathway for prediction of insulin sensitivity from expression data. Molecular Genetics and Metabolism. 114: 66-72. PMID 25468647 DOI: 10.1016/J.Ymgme.2014.11.003  0.307
2014 Nargund S, Misra A, Zhang X, Coleman GD, Sriram G. Flux and reflux: metabolite reflux in plant suspension cells and its implications for isotope-assisted metabolic flux analysis. Molecular Biosystems. 10: 1496-508. PMID 24675729 DOI: 10.1039/C3Mb70348G  0.508
2014 Zheng Y, Sriram G. Steady-state and instationary modeling of proteinogenic and free amino acid isotopomers for flux quantification. Methods in Molecular Biology (Clifton, N.J.). 1090: 155-79. PMID 24222416 DOI: 10.1007/978-1-62703-688-7_11  0.487
2014 Simons M, Misra A, Sriram G. Genome-scale models of plant metabolism Methods in Molecular Biology. 1083: 213-230. PMID 24218218 DOI: 10.1007/978-1-62703-661-0_13  0.495
2014 Nargund S, Sriram G. Mathematical modeling of isotope labeling experiments for metabolic flux analysis. Methods in Molecular Biology (Clifton, N.J.). 1083: 109-31. PMID 24218213 DOI: 10.1007/978-1-62703-661-0_8  0.502
2013 Zheng Y, Quinn AH, Sriram G. Experimental evidence and isotopomer analysis of mixotrophic glucose metabolism in the marine diatom Phaeodactylum tricornutum. Microbial Cell Factories. 12: 109. PMID 24228629 DOI: 10.1186/1475-2859-12-109  0.436
2013 Misra A, Conway MF, Johnnie J, Qureshi TM, Lige B, Derrick AM, Agbo EC, Sriram G. Metabolic analyses elucidate non-trivial gene targets for amplifying dihydroartemisinic acid production in yeast. Frontiers in Microbiology. 4: 200. PMID 23898325 DOI: 10.3389/Fmicb.2013.00200  0.547
2013 Nargund S, Joffe ME, Tran D, Tugarinov V, Sriram G. Nuclear magnetic resonance methods for metabolic fluxomics. Methods in Molecular Biology (Clifton, N.J.). 985: 335-51. PMID 23417811 DOI: 10.1007/978-1-62703-299-5_16  0.486
2013 Nargund S, Sriram G. Designer labels for plant metabolism: statistical design of isotope labeling experiments for improved quantification of flux in complex plant metabolic networks. Molecular Biosystems. 9: 99-112. PMID 23114423 DOI: 10.1039/C2Mb25253H  0.523
2013 Zhang X, Nargund S, Misra A, Coleman GD, Sriram G. Isotope-assisted metabolic flux analysis reveals metabolic landscape alterations in poplar induced by carbon-nitrogen interactions Food, Pharmaceutical and Bioengineering Division 2013 - Core Programming Area At the 2013 Aiche Annual Meeting: Global Challenges For Engineering a Sustainable Future. 813.  0.47
2012 Johnnie J, Austin M, Sriram G, Conway M, Misra A. Systems engineering and metabolic engineering: A side-by-side comparison Procedia Computer Science. 8: 226-231. DOI: 10.1016/J.Procs.2012.01.047  0.448
2011 Zheng Y, Sriram G. Probing carbon flow patterns in a photosynthetically efficient marine diatom toward biofuel production 11aiche - 2011 Aiche Annual Meeting, Conference Proceedings.  0.515
2010 Alper H, Cirino P, Nevoigt E, Sriram G. Applications of synthetic biology in microbial biotechnology. Journal of Biomedicine & Biotechnology. 2010: 918391. PMID 21437213 DOI: 10.1155/2010/918391  0.413
2010 Zheng Y, Sriram G. Mathematical modeling: bridging the gap between concept and realization in synthetic biology. Journal of Biomedicine & Biotechnology. 2010: 541609. PMID 20589069 DOI: 10.1155/2010/541609  0.356
2010 Sriram G, Parr LS, Rahib L, Liao JC, Dipple KM. Moonlighting function of glycerol kinase causes systems-level changes in rat hepatoma cells. Metabolic Engineering. 12: 332-40. PMID 20399282 DOI: 10.1016/J.Ymben.2010.04.001  0.406
2009 Rahib L, Sriram G, Harada MK, Liao JC, Dipple KM. Transcriptomic and network component analysis of glycerol kinase in skeletal muscle using a mouse model of glycerol kinase deficiency. Molecular Genetics and Metabolism. 96: 106-12. PMID 19121967 DOI: 10.1016/J.Ymgme.2008.11.163  0.338
2008 Iyer VV, Sriram G, Fulton DB, Zhou R, Westgate ME, Shanks JV. Metabolic flux maps comparing the effect of temperature on protein and oil biosynthesis in developing soybean cotyledons. Plant, Cell & Environment. 31: 506-17. PMID 18194425 DOI: 10.1111/J.1365-3040.2008.01781.X  0.706
2008 Sriram G, Rahib L, He JS, Campos AE, Parr LS, Liao JC, Dipple KM. Global metabolic effects of glycerol kinase overexpression in rat hepatoma cells. Molecular Genetics and Metabolism. 93: 145-59. PMID 18029214 DOI: 10.1016/J.Ymgme.2007.09.008  0.475
2007 Sriram G, Iyer VV, Bruce Fulton D, Shanks JV. Identification of hexose hydrolysis products in metabolic flux analytes: a case study of levulinic acid in plant protein hydrolysate. Metabolic Engineering. 9: 442-51. PMID 17888703 DOI: 10.1016/J.Ymben.2007.07.003  0.723
2007 Sriram G, Fulton DB, Shanks JV. Flux quantification in central carbon metabolism of Catharanthus roseus hairy roots by 13C labeling and comprehensive bondomer balancing. Phytochemistry. 68: 2243-57. PMID 17532015 DOI: 10.1016/J.Phytochem.2007.04.009  0.72
2006 Sriram G, González-Rivera O, Shanks JV. Determination of biomass composition of Catharanthus roseus hairy roots for metabolic flux analysis. Biotechnology Progress. 22: 1659-63. PMID 17137315 DOI: 10.1021/Bp060162K  0.697
2005 Sriram G, Martinez JA, McCabe ER, Liao JC, Dipple KM. Single-gene disorders: what role could moonlighting enzymes play? American Journal of Human Genetics. 76: 911-24. PMID 15877277 DOI: 10.1086/430799  0.332
2004 Sriram G, Fulton DB, Iyer VV, Peterson JM, Zhou R, Westgate ME, Spalding MH, Shanks JV. Quantification of compartmented metabolic fluxes in developing soybean embryos by employing biosynthetically directed fractional (13)C labeling, two-dimensional [(13)C, (1)H] nuclear magnetic resonance, and comprehensive isotopomer balancing. Plant Physiology. 136: 3043-57. PMID 15466217 DOI: 10.1104/Pp.104.050625  0.737
2004 Sriram G, Shanks JV. Improvements in metabolic flux analysis using carbon bond labeling experiments: bondomer balancing and Boolean function mapping. Metabolic Engineering. 6: 116-32. PMID 15113565 DOI: 10.1016/J.Ymben.2004.02.003  0.697
2001 Sriram G, Sureshkumar GK. Culture fluorescence dynamics in Xanthomonas campestris Process Biochemistry. 36: 1167-1173. DOI: 10.1016/S0032-9592(01)00151-0  0.301
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