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Xin Yu - Publications

Affiliations: 
2014-2020 High Field Magnetic Resonance Max Planck Institute for Biological Cybernetics, Tübingen, Baden-Württemberg, Germany 
 2018- Radiology Mass General Hospital and Harvard Medical School 
Area:
Neuroimaging, fMRI, plasticity, Neurovascular Coupling,
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51 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Chen DY, Di X, Yu X, Biswal BB. The significance and limited influence of cerebrovascular reactivity on age and sex effects in task- and resting-state brain activity. Cerebral Cortex (New York, N.Y. : 1991). PMID 38212284 DOI: 10.1093/cercor/bhad448  0.445
2023 Liu X, Hike D, Choi S, Man W, Ran C, Zhou XA, Jiang Y, Yu X. Mapping the bioimaging marker of Alzheimer's disease based on pupillary light response-driven brain-wide fMRI in awake mice. Biorxiv : the Preprint Server For Biology. PMID 38187675 DOI: 10.1101/2023.12.20.572613  0.673
2023 Hike D, Liu X, Xie Z, Zhang B, Choi S, Zhou XA, Liu A, Murstein A, Jiang Y, Devor A, Yu X. High-resolution awake mouse fMRI at 14 Tesla. Biorxiv : the Preprint Server For Biology. PMID 38106227 DOI: 10.1101/2023.12.08.570803  0.75
2023 Chen Y, Fernandez Z, Scheel N, Gifani M, Zhu DC, Counts SE, Dorrance AM, Razansky D, Yu X, Qian W, Qian C. Novel inductively coupled ear-bars (ICEs) to enhance restored fMRI signal from susceptibility compensation in rats. Cerebral Cortex (New York, N.Y. : 1991). PMID 38100332 DOI: 10.1093/cercor/bhad479  0.337
2023 Chen DY, Di X, Yu X, Biswal BB. The Significance and Limited Influence of Cerebrovascular Reactivity on Age and Sex Effects in Task- and Resting-State Brain Activity. Biorxiv : the Preprint Server For Biology. PMID 37662201 DOI: 10.1101/2023.08.18.553848  0.446
2023 Choi S, Hike D, Pohmann R, Avdievich N, Scheffler K, Yu X. Alpha-180 spin-echo based line-scanning method for high resolution laminar-specific fMRI. Biorxiv : the Preprint Server For Biology. PMID 37214920 DOI: 10.1101/2023.05.09.540065  0.501
2023 Grandjean J, Desrosiers-Gregoire G, Anckaerts C, Angeles-Valdez D, Ayad F, Barrière DA, Blockx I, Bortel A, Broadwater M, Cardoso BM, Célestine M, Chavez-Negrete JE, Choi S, Christiaen E, Clavijo P, ... ... Yu X, et al. Author Correction: A consensus protocol for functional connectivity analysis in the rat brain. Nature Neuroscience. PMID 37072562 DOI: 10.1038/s41593-023-01328-1  0.606
2023 Grandjean J, Desrosiers-Gregoire G, Anckaerts C, Angeles-Valdez D, Ayad F, Barrière DA, Blockx I, Bortel A, Broadwater M, Cardoso BM, Célestine M, Chavez-Negrete JE, Choi S, Christiaen E, Clavijo P, ... ... Yu X, et al. A consensus protocol for functional connectivity analysis in the rat brain. Nature Neuroscience. PMID 36973511 DOI: 10.1038/s41593-023-01286-8  0.607
2023 Choi S, Chen Y, Zeng H, Biswal B, Yu X. Identifying the distinct spectral dynamics of laminar-specific interhemispheric connectivity with bilateral line-scanning fMRI. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X231158434. PMID 36803280 DOI: 10.1177/0271678X231158434  0.521
2022 Chen X, Jiang Y, Choi S, Pohmann R, Scheffler K, Kleinfeld D, Yu X. Correction: Assessment of single-vessel cerebral blood velocity by phase contrast fMRI. Plos Biology. 20: e3001951. PMID 36577117 DOI: 10.1371/journal.pbio.3001951  0.655
2022 Klugah-Brown B, Yu Y, Hu P, Agoalikum E, Liu C, Liu X, Yang X, Zeng Y, Zhou X, Yu X, Rypma B, Michael AM, Li X, Becker B, Biswal B. Effect of surgical mask on fMRI signals during task and rest. Communications Biology. 5: 1004. PMID 36130993 DOI: 10.1038/s42003-022-03908-6  0.429
2022 Castaneda-Vega S, Beer-Hammer S, Leiss V, Napieczyńska H, Vuozzo M, Schmid AM, Zeng H, He Y, Kohlhofer U, Gonzalez-Menendez I, Quintanilla-Martinez L, Hempel JM, Gollasch M, Yu X, Pichler BJ, et al. Cerebrovascular G Proteins Protect Against Brain Hypoperfusion and Collateral Failure in Cerebral Ischemia. Molecular Imaging and Biology. PMID 36074223 DOI: 10.1007/s11307-022-01764-8  0.412
2022 Zhou XA, Jiang Y, Napadow V, Yu X. Challenges and Perspectives of Mapping Locus Coeruleus Activity in the Rodent with High-Resolution fMRI. Brain Sciences. 12. PMID 36009148 DOI: 10.3390/brainsci12081085  0.682
2022 Zeng H, Jiang Y, Beer-Hammer S, Yu X. Awake Mouse fMRI and Pupillary Recordings in the Ultra-High Magnetic Field. Frontiers in Neuroscience. 16: 886709. PMID 35903811 DOI: 10.3389/fnins.2022.886709  0.574
2022 Choi S, Zeng H, Chen Y, Sobczak F, Qian C, Yu X. Laminar-Specific Functional Connectivity Mapping with Multi-Slice Line-Scanning fMRI. Cerebral Cortex (New York, N.Y. : 1991). PMID 35107125 DOI: 10.1093/cercor/bhab497  0.332
2021 Chen Y, Wang Q, Choi S, Zeng H, Takahashi K, Qian C, Yu X. Focal fMRI signal enhancement with implantable inductively coupled detectors. Neuroimage. 247: 118793. PMID 34896291 DOI: 10.1016/j.neuroimage.2021.118793  0.303
2021 Pais-Roldán P, Mateo C, Pan WJ, Acland B, Kleinfeld D, Snyder LH, Yu X, Keilholz S. Contribution of animal models toward understanding resting state functional connectivity. Neuroimage. 245: 118630. PMID 34644593 DOI: 10.1016/j.neuroimage.2021.118630  0.573
2021 Chen X, Jiang Y, Choi S, Pohmann R, Scheffler K, Kleinfeld D, Yu X. Assessment of single-vessel cerebral blood velocity by phase contrast fMRI. Plos Biology. 19: e3000923. PMID 34499636 DOI: 10.1371/journal.pbio.3000923  0.723
2021 Mächler P, Broggini T, Mateo C, Thunemann M, Fomin-Thunemann N, Doran PR, Sencan I, Kilic K, Desjardins M, Uhlirova H, Yaseen MA, Boas DA, Linninger AA, Vergassola M, Yu X, et al. A Suite of Neurophotonic Tools to Underpin the Contribution of Internal Brain States in fMRI. Current Opinion in Biomedical Engineering. 18. PMID 33959688 DOI: 10.1016/j.cobme.2021.100273  0.73
2020 Choi S, Takahashi K, Jiang Y, Köhler S, Zeng H, Wang Q, Ma Y, Yu X. Real-Time fMRI Brain Mapping in Animals. Journal of Visualized Experiments : Jove. PMID 33044460 DOI: 10.3791/61463  0.544
2020 Sobczak F, He Y, Sejnowski TJ, Yu X. Predicting the fMRI Signal Fluctuation with Recurrent Neural Networks Trained on Vascular Network Dynamics. Cerebral Cortex (New York, N.Y. : 1991). PMID 32940658 DOI: 10.1093/Cercor/Bhaa260  0.607
2020 Drew PJ, Mateo C, Turner KL, Yu X, Kleinfeld D. Ultra-slow Oscillations in fMRI and Resting-State Connectivity: Neuronal and Vascular Contributions and Technical Confounds. Neuron. PMID 32791040 DOI: 10.1016/J.Neuron.2020.07.020  0.6
2020 Chen Y, Sobczak F, Pais-Roldán P, Schwarz C, Koretsky AP, Yu X. Mapping the Brain-Wide Network Effects by Optogenetic Activation of the Corpus Callosum. Cerebral Cortex (New York, N.Y. : 1991). PMID 32556241 DOI: 10.1093/Cercor/Bhaa164  0.678
2020 Ovsepian SV, Jiang Y, Sardella TCP, Malekzadeh-Najafabadi J, Burton NC, Yu X, Ntziachristos V. Visualizing cortical response to optogenetic stimulation and sensory inputs using multispectral handheld optoacoustic imaging. Photoacoustics. 17: 100153. PMID 32154103 DOI: 10.1016/J.Pacs.2019.100153  0.562
2020 Pais-Roldán P, Takahashi K, Sobczak F, Chen Y, Zhao X, Zeng H, Jiang Y, Yu X. Indexing brain state-dependent pupil dynamics with simultaneous fMRI and optical fiber calcium recording. Proceedings of the National Academy of Sciences of the United States of America. PMID 32139609 DOI: 10.1073/Pnas.1909937117  0.565
2019 Handwerker J, Pérez-Rodas M, Beyerlein M, Vincent F, Beck A, Freytag N, Yu X, Pohmann R, Anders J, Scheffler K. A CMOS NMR needle for probing brain physiology with high spatial and temporal resolution. Nature Methods. PMID 31768059 DOI: 10.1038/S41592-019-0640-3  0.54
2019 Chen X, Sobczak F, Chen Y, Jiang Y, Qian C, Lu Z, Ayata C, Logothetis NK, Yu X. Mapping optogenetically-driven single-vessel fMRI with concurrent neuronal calcium recordings in the rat hippocampus. Nature Communications. 10: 5239. PMID 31748553 DOI: 10.1038/s41467-019-12850-x  0.668
2019 He Y, Wang M, Yu X. High spatiotemporal vessel-specific hemodynamic mapping with multi-echo single-vessel fMRI. Journal of Cerebral Blood Flow and Metabolism : Official Journal of the International Society of Cerebral Blood Flow and Metabolism. 271678X19886240. PMID 31696765 DOI: 10.1177/0271678X19886240  0.526
2019 Chen Y, Pais-Roldan P, Chen X, Frosz MH, Yu X. MRI-guided robotic arm drives optogenetic fMRI with concurrent Ca recording. Nature Communications. 10: 2536. PMID 31182714 DOI: 10.1038/S41467-019-10450-3  0.386
2019 Pais-Roldán P, Edlow BL, Jiang Y, Stelzer J, Zou M, Yu X. Multimodal assessment of recovery from coma in a rat model of diffuse brainstem tegmentum injury. Neuroimage. PMID 30708105 DOI: 10.1016/J.Neuroimage.2019.01.060  0.562
2018 Pais-Roldán P, Biswal B, Scheffler K, Yu X. Identifying Respiration-Related Aliasing Artifacts in the Rodent Resting-State fMRI. Frontiers in Neuroscience. 12: 788. PMID 30455623 DOI: 10.3389/Fnins.2018.00788  0.644
2018 He Y, Wang M, Chen X, Pohmann R, Polimeni JR, Scheffler K, Rosen BR, Kleinfeld D, Yu X. Ultra-Slow Single-Vessel BOLD and CBV-Based fMRI Spatiotemporal Dynamics and Their Correlation with Neuronal Intracellular Calcium Signals. Neuron. PMID 29398359 DOI: 10.1016/J.Neuron.2018.01.025  0.746
2018 Wang M, He Y, Sejnowski TJ, Yu X. Brain-state dependent astrocytic Ca2+ signals are coupled to both positive and negative BOLD-fMRI signals. Proceedings of the National Academy of Sciences of the United States of America. PMID 29382752 DOI: 10.1073/Pnas.1711692115  0.578
2017 Chung S, Jeong JH, Ko S, Yu X, Kim YH, Isaac JTR, Koretsky AP. Peripheral Sensory Deprivation Restores Critical-Period-like Plasticity to Adult Somatosensory Thalamocortical Inputs. Cell Reports. 19: 2707-2717. PMID 28658619 DOI: 10.1016/J.Celrep.2017.06.018  0.533
2017 Kleinfeld D, He Y, Mateo C, Scheffler K, Rosen B, Yu X. Two-photon and fMRI measurements of activity dependent single vessel dynamics in mouse Brain. DOI: 10.1364/Brain.2017.Brs1B.4  0.711
2016 Yu X, He Y, Wang M, Merkle H, Dodd SJ, Silva AC, Koretsky AP. Sensory and optogenetically driven single-vessel fMRI. Nature Methods. PMID 26855362 DOI: 10.1038/Nmeth.3765  0.787
2015 Wang X, Wang J, He Y, Li H, Yuan H, Evans A, Yu X, He Y, Wang H. Apolipoprotein E ε4 Modulates Cognitive Profiles, Hippocampal Volume, and Resting-State Functional Connectivity in Alzheimer's Disease. Journal of Alzheimer's Disease : Jad. 45: 781-95. PMID 25624419 DOI: 10.3233/Jad-142556  0.374
2015 Wang J, Wang X, He Y, Yu X, Wang H, He Y. Apolipoprotein E ε4 modulates functional brain connectome in Alzheimer's disease. Human Brain Mapping. 36: 1828-46. PMID 25619771 DOI: 10.1002/Hbm.22740  0.38
2014 Qian C, Yu X, Pothayee N, Dodd S, Bouraoud N, Star R, Bennett K, Koretsky A. Live nephron imaging by MRI. American Journal of Physiology. Renal Physiology. 307: F1162-8. PMID 25186296 DOI: 10.1152/Ajprenal.00326.2014  0.556
2014 Yu X, Koretsky AP. Interhemispheric plasticity protects the deafferented somatosensory cortex from functional takeover after nerve injury. Brain Connectivity. 4: 709-17. PMID 25117691 DOI: 10.1089/Brain.2014.0259  0.622
2014 Yu X, Qian C, Chen DY, Dodd SJ, Koretsky AP. Deciphering laminar-specific neural inputs with line-scanning fMRI. Nature Methods. 11: 55-8. PMID 24240320 DOI: 10.1038/Nmeth.2730  0.612
2013 Qian C, Yu X, Chen DY, Dodd S, Bouraoud N, Pothayee N, Chen Y, Beeman S, Bennett K, Murphy-Boesch J, Koretsky A. Wireless amplified nuclear MR detector (WAND) for high-spatial-resolution MR imaging of internal organs: preclinical demonstration in a rodent model. Radiology. 268: 228-36. PMID 23392428 DOI: 10.1148/Radiol.13121352  0.545
2012 Yu X, Chung S, Chen DY, Wang S, Dodd SJ, Walters JR, Isaac JT, Koretsky AP. Thalamocortical inputs show post-critical-period plasticity. Neuron. 74: 731-42. PMID 22632730 DOI: 10.1016/J.Neuron.2012.04.024  0.686
2012 Yu X, Glen D, Wang S, Dodd S, Hirano Y, Saad Z, Reynolds R, Silva AC, Koretsky AP. Direct imaging of macrovascular and microvascular contributions to BOLD fMRI in layers IV-V of the rat whisker-barrel cortex. Neuroimage. 59: 1451-60. PMID 21851857 DOI: 10.1016/J.Neuroimage.2011.08.001  0.77
2011 Yu X, Nieman BJ, Sudarov A, Szulc KU, Abdollahian DJ, Bhatia N, Lalwani AK, Joyner AL, Turnbull DH. Morphological and functional midbrain phenotypes in Fibroblast Growth Factor 17 mutant mice detected by Mn-enhanced MRI. Neuroimage. 56: 1251-8. PMID 21356319 DOI: 10.1016/J.Neuroimage.2011.02.068  0.7
2010 Yu X, Wang S, Chen DY, Dodd S, Goloshevsky A, Koretsky AP. 3D mapping of somatotopic reorganization with small animal functional MRI. Neuroimage. 49: 1667-76. PMID 19770051 DOI: 10.1016/J.Neuroimage.2009.09.021  0.622
2008 Yu X, Zou J, Babb JS, Johnson G, Sanes DH, Turnbull DH. Statistical mapping of sound-evoked activity in the mouse auditory midbrain using Mn-enhanced MRI. Neuroimage. 39: 223-30. PMID 17919926 DOI: 10.1016/J.Neuroimage.2007.08.029  0.733
2007 Yu X, Sanes DH, Aristizabal O, Wadghiri YZ, Turnbull DH. Large-scale reorganization of the tonotopic map in mouse auditory midbrain revealed by MRI. Proceedings of the National Academy of Sciences of the United States of America. 104: 12193-8. PMID 17620614 DOI: 10.1073/Pnas.0700960104  0.71
2006 Deans AE, Wadghiri YZ, Bernas LM, Yu X, Rutt BK, Turnbull DH. Cellular MRI contrast via coexpression of transferrin receptor and ferritin. Magnetic Resonance in Medicine : Official Journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. 56: 51-9. PMID 16724301 DOI: 10.1002/Mrm.20914  0.734
2005 Yu X, Wadghiri YZ, Sanes DH, Turnbull DH. In vivo auditory brain mapping in mice with Mn-enhanced MRI. Nature Neuroscience. 8: 961-8. PMID 15924136 DOI: 10.1038/Nn1477  0.725
2004 Wadghiri YZ, Blind JA, Duan X, Moreno C, Yu X, Joyner AL, Turnbull DH. Manganese-enhanced magnetic resonance imaging (MEMRI) of mouse brain development. Nmr in Biomedicine. 17: 613-9. PMID 15761950 DOI: 10.1002/Nbm.932  0.712
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