David T. Lodowski, Ph.D. - Publications

Affiliations: 
2004 University of Texas at Austin, Austin, Texas, U.S.A. 
Area:
Biochemistry

32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Huynh KW, Cohen MR, Jiang J, Samanta A, Lodowski DT, Zhou ZH, Moiseenkova-Bell VY. Structure of the full-length TRPV2 channel by cryo-EM. Nature Communications. 7: 11130. PMID 27021073 DOI: 10.1038/ncomms11130  0.6
2015 Blankenship E, Vahedi-Faridi A, Lodowski DT. The High-Resolution Structure of Activated Opsin Reveals a Conserved Solvent Network in the Transmembrane Region Essential for Activation. Structure (London, England : 1993). 23: 2358-64. PMID 26526852 DOI: 10.1016/j.str.2015.09.015  0.6
2015 Schmandt N, Velisetty P, Chalamalasetti SV, Stein RA, Bonner R, Talley L, Parker MD, Mchaourab HS, Yee VC, Lodowski DT, Chakrapani S. A chimeric prokaryotic pentameric ligand-gated channel reveals distinct pathways of activation. The Journal of General Physiology. 146: 323-40. PMID 26415570 DOI: 10.1085/jgp.201511478  0.6
2015 Lodowski DT, Miyagi M. Analysis of conformational changes in rhodopsin by histidine hydrogen-deuterium exchange. Methods in Molecular Biology (Clifton, N.J.). 1271: 123-32. PMID 25697521 DOI: 10.1007/978-1-4939-2330-4_9  0.6
2015 Blankenship E, Lodowski DT. Rhodopsin purification from dark-adapted bovine retina. Methods in Molecular Biology (Clifton, N.J.). 1271: 21-38. PMID 25697514 DOI: 10.1007/978-1-4939-2330-4_2  0.6
2014 Blankenship E, Vukoti K, Miyagi M, Lodowski DT. Conformational flexibility in the catalytic triad revealed by the high-resolution crystal structure of Streptomyces erythraeus trypsin in an unliganded state. Acta Crystallographica. Section D, Biological Crystallography. 70: 833-40. PMID 24598752 DOI: 10.1107/S1399004713033658  0.6
2014 Ernst OP, Lodowski DT, Elstner M, Hegemann P, Brown LS, Kandori H. Microbial and animal rhodopsins: structures, functions, and molecular mechanisms. Chemical Reviews. 114: 126-63. PMID 24364740 DOI: 10.1021/cr4003769  0.6
2012 Golczak M, Kiser PD, Sears AE, Lodowski DT, Blaner WS, Palczewski K. Structural basis for the acyltransferase activity of lecithin:retinol acyltransferase-like proteins. The Journal of Biological Chemistry. 287: 23790-807. PMID 22605381 DOI: 10.1074/jbc.M112.361550  0.6
2011 Salon JA, Lodowski DT, Palczewski K. The significance of G protein-coupled receptor crystallography for drug discovery. Pharmacological Reviews. 63: 901-37. PMID 21969326 DOI: 10.1124/pr.110.003350  0.6
2011 Jastrzebska B, Ringler P, Lodowski DT, Moiseenkova-Bell V, Golczak M, Müller SA, Palczewski K, Engel A. Rhodopsin-transducin heteropentamer: three-dimensional structure and biochemical characterization. Journal of Structural Biology. 176: 387-94. PMID 21925606 DOI: 10.1016/j.jsb.2011.08.016  0.6
2011 Mast N, Annalora AJ, Lodowski DT, Palczewski K, Stout CD, Pikuleva IA. Structural basis for three-step sequential catalysis by the cholesterol side chain cleavage enzyme CYP11A1. The Journal of Biological Chemistry. 286: 5607-13. PMID 21159775 DOI: 10.1074/jbc.M110.188433  0.6
2010 Lodowski DT, Palczewski K, Miyagi M. Conformational changes in the g protein-coupled receptor rhodopsin revealed by histidine hydrogen-deuterium exchange. Biochemistry. 49: 9425-7. PMID 20939497 DOI: 10.1021/bi101502v  0.6
2010 Goc A, Chami M, Lodowski DT, Bosshart P, Moiseenkova-Bell V, Baehr W, Engel A, Palczewski K. Structural characterization of the rod cGMP phosphodiesterase 6. Journal of Molecular Biology. 401: 363-73. PMID 20600113 DOI: 10.1016/j.jmb.2010.06.044  0.6
2010 Becka S, Zhang P, Craig SE, Lodowski DT, Wang Z, Brady-Kalnay SM. Characterization of the adhesive properties of the type IIb subfamily receptor protein tyrosine phosphatases. Cell Communication & Adhesion. 17: 34-47. PMID 20521994 DOI: 10.3109/15419061.2010.487957  0.6
2010 Burden-Gulley SM, Gates TJ, Burgoyne AM, Cutter JL, Lodowski DT, Robinson S, Sloan AE, Miller RH, Basilion JP, Brady-Kalnay SM. A novel molecular diagnostic of glioblastomas: detection of an extracellular fragment of protein tyrosine phosphatase mu. Neoplasia (New York, N.Y.). 12: 305-16. PMID 20360941 DOI: 10.1593/neo.91940  0.6
2010 Tesmer JJ, Tesmer VM, Lodowski DT, Steinhagen H, Huber J. Structure of human G protein-coupled receptor kinase 2 in complex with the kinase inhibitor balanol. Journal of Medicinal Chemistry. 53: 1867-70. PMID 20128603 DOI: 10.1021/jm9017515  0.6
2010 Golczak M, Kiser PD, Lodowski DT, Maeda A, Palczewski K. Importance of membrane structural integrity for RPE65 retinoid isomerization activity. The Journal of Biological Chemistry. 285: 9667-82. PMID 20100834 DOI: 10.1074/jbc.M109.063941  0.6
2009 Zhang P, Becka S, Craig SE, Lodowski DT, Brady-Kalnay SM, Wang Z. Cancer-derived mutations in the fibronectin III repeats of PTPRT/PTPrho inhibit cell-cell aggregation. Cell Communication & Adhesion. 16: 146-53. PMID 20230342 DOI: 10.3109/15419061003653771  0.6
2009 Kiser PD, Golczak M, Lodowski DT, Chance MR, Palczewski K. Crystal structure of native RPE65, the retinoid isomerase of the visual cycle. Proceedings of the National Academy of Sciences of the United States of America. 106: 17325-30. PMID 19805034 DOI: 10.1073/pnas.0906600106  0.6
2009 Lodowski DT, Palczewski K. Chemokine receptors and other G protein-coupled receptors. Current Opinion in Hiv and Aids. 4: 88-95. PMID 19339946 DOI: 10.1097/COH.0b013e3283223d8d  0.6
2009 Lodowski DT, Angel TE, Palczewski K. Comparative analysis of GPCR crystal structures. Photochemistry and Photobiology. 85: 425-30. PMID 19192200 DOI: 10.1111/j.1751-1097.2008.00516.x  0.6
2008 Park PS, Lodowski DT, Palczewski K. Activation of G protein-coupled receptors: beyond two-state models and tertiary conformational changes. Annual Review of Pharmacology and Toxicology. 48: 107-41. PMID 17848137 DOI: 10.1146/annurev.pharmtox.48.113006.094630  0.6
2007 Lodowski DT, Salom D, Le Trong I, Teller DC, Ballesteros JA, Palczewski K, Stenkamp RE. Reprint of "Crystal packing analysis of Rhodopsin crystals" [J. Struct. Biol. 158 (2007) 455-462]. Journal of Structural Biology. 159: 253-60. PMID 17660064 DOI: 10.1016/S1047-8477(07)00166-9  0.6
2007 Kiser PD, Lodowski DT, Palczewski K. Purification, crystallization and structure determination of native GroEL from Escherichia coli lacking bound potassium ions. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 63: 457-61. PMID 17554162 DOI: 10.1107/S1744309107020295  0.6
2007 Sun W, Gerth C, Maeda A, Lodowski DT, Van Der Kraak L, Saperstein DA, Héon E, Palczewski K. Novel RDH12 mutations associated with Leber congenital amaurosis and cone-rod dystrophy: biochemical and clinical evaluations. Vision Research. 47: 2055-66. PMID 17512964 DOI: 10.1016/j.visres.2007.04.005  0.6
2007 Lodowski DT, Salom D, Le Trong I, Teller DC, Ballesteros JA, Palczewski K, Stenkamp RE. Crystal packing analysis of Rhodopsin crystals. Journal of Structural Biology. 158: 455-62. PMID 17374491 DOI: 10.1016/j.jsb.2007.01.017  0.6
2006 Salom D, Lodowski DT, Stenkamp RE, Le Trong I, Golczak M, Jastrzebska B, Harris T, Ballesteros JA, Palczewski K. Crystal structure of a photoactivated deprotonated intermediate of rhodopsin. Proceedings of the National Academy of Sciences of the United States of America. 103: 16123-8. PMID 17060607 DOI: 10.1073/pnas.0608022103  0.6
2006 Salom D, Le Trong I, Pohl E, Ballesteros JA, Stenkamp RE, Palczewski K, Lodowski DT. Improvements in G protein-coupled receptor purification yield light stable rhodopsin crystals. Journal of Structural Biology. 156: 497-504. PMID 16837211 DOI: 10.1016/j.jsb.2006.05.003  0.6
2006 Lodowski DT, Tesmer VM, Benovic JL, Tesmer JJ. The structure of G protein-coupled receptor kinase (GRK)-6 defines a second lineage of GRKs. The Journal of Biological Chemistry. 281: 16785-93. PMID 16613860 DOI: 10.1074/jbc.M601327200  0.6
2005 Lodowski DT, Barnhill JF, Pyskadlo RM, Ghirlando R, Sterne-Marr R, Tesmer JJ. The role of G beta gamma and domain interfaces in the activation of G protein-coupled receptor kinase 2. Biochemistry. 44: 6958-70. PMID 15865441 DOI: 10.1021/bi050119q  0.6
2003 Lodowski DT, Barnhill JF, Pitcher JA, Capel WD, Lefkowitz RJ, Tesmer JJ. Purification, crystallization and preliminary X-ray diffraction studies of a complex between G protein-coupled receptor kinase 2 and Gbeta1gamma2. Acta Crystallographica. Section D, Biological Crystallography. 59: 936-9. PMID 12777817 DOI: 10.1107/S0907444903002622  0.6
2003 Lodowski DT, Pitcher JA, Capel WD, Lefkowitz RJ, Tesmer JJ. Keeping G proteins at bay: a complex between G protein-coupled receptor kinase 2 and Gbetagamma. Science (New York, N.Y.). 300: 1256-62. PMID 12764189 DOI: 10.1126/science.1082348  0.6
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