Artem Barski, Ph.D. - Publications

Affiliations: 
2006 University of Southern California, Los Angeles, CA, United States 
Area:
Molecular Biology, Biochemistry

155 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Korinfskaya S, Parameswaran S, Weirauch MT, Barski A. Runx Transcription Factors in T Cells-What Is Beyond Thymic Development? Frontiers in Immunology. 12: 701924. PMID 34421907 DOI: 10.3389/fimmu.2021.701924  1
2021 Felton JM, Bouffi C, Schwartz JT, Schollaert KL, Malik A, Vallabh S, Wronowski B, Magier AZ, Merlin L, Barski A, Weirauch MT, Fulkerson PC, Rothenberg ME. Aiolos regulates eosinophil migration into tissues. Mucosal Immunology. PMID 34341502 DOI: 10.1038/s41385-021-00416-4  1
2021 Felton JM, Vallabh S, Parameswaran S, Edsall LE, Ernst K, Wronowski B, Malik A, Kotliar M, Weirauch MT, Barski A, Fulkerson PC, Rothenberg ME. Epigenetic Analysis of the Chromatin Landscape Identifies a Repertoire of Murine Eosinophil-Specific PU.1-Bound Enhancers. Journal of Immunology (Baltimore, Md. : 1950). PMID 34330753 DOI: 10.4049/jimmunol.2000207  1
2021 Chidambaran V, Zhang X, Pilipenko V, Chen X, Wronowski B, Geisler K, Martin LJ, Barski A, Weirauch MT, Ji H. Methylation quantitative trait locus analysis of chronic postsurgical pain uncovers epigenetic mediators of genetic risk. Epigenomics. PMID 33820434 DOI: 10.2217/epi-2020-0424  1
2021 Milewski D, Shukla S, Gryder BE, Pradhan A, Donovan J, Sudha P, Vallabh S, Pyros A, Xu Y, Barski A, Szabo S, Turpin B, Pressey JG, Millay DP, Khan J, et al. FOXF1 is required for the oncogenic properties of PAX3-FOXO1 in rhabdomyosarcoma. Oncogene. PMID 33627785 DOI: 10.1038/s41388-021-01694-9  1
2020 Maezawa S, Sakashita A, Yukawa M, Chen X, Takahashi K, Alavattam KG, Nakata I, Weirauch MT, Barski A, Namekawa SH. Super-enhancer switching drives a burst in gene expression at the mitosis-to-meiosis transition. Nature Structural & Molecular Biology. PMID 32895557 DOI: 10.1038/S41594-020-0488-3  1
2020 Sakashita A, Maezawa S, Takahashi K, Alavattam KG, Yukawa M, Hu YC, Kojima S, Parrish NF, Barski A, Pavlicev M, Namekawa SH. Endogenous retroviruses drive species-specific germline transcriptomes in mammals. Nature Structural & Molecular Biology. PMID 32895553 DOI: 10.1038/S41594-020-0487-4  1
2020 Lavery WJ, Barski A, Wiley S, Schorry EK, Lindsley AW. KMT2C/D COMPASS complex-associated diseases [KCOM-ADs]: an emerging class of congenital regulopathies. Clinical Epigenetics. 12: 10. PMID 31924266 DOI: 10.1186/S13148-019-0802-2  0.01
2019 Pilarowski GO, Cazares T, Zhang L, Benjamin JS, Liu K, Jagannathan S, Mousa N, Kasten J, Barski A, Lindsley AW, Bjornsson HT. Abnormal Peyer's patch development and B cell gut homing drive IgA deficiency in Kabuki syndrome. The Journal of Allergy and Clinical Immunology. PMID 31816409 DOI: 10.1016/J.Jaci.2019.11.034  1
2019 Yukawa M, Jagannathan S, Vallabh S, Kartashov AV, Chen X, Weirauch MT, Barski A. AP-1 activity induced by co-stimulation is required for chromatin opening during T cell activation. The Journal of Experimental Medicine. PMID 31653690 DOI: 10.1084/Jem.20182009  1
2019 Vanoni S, Zeng C, Marella S, Uddin J, Wu D, Arora K, Ptaschinski C, Que J, Noah T, Waggoner L, Barski A, Kartashov A, Rochman M, Wen T, Martin L, et al. Identification of ANO1 as a key driver of esophageal epithelial proliferation in eosinophilic esophagitis. The Journal of Allergy and Clinical Immunology. PMID 31647967 DOI: 10.1016/J.Jaci.2019.07.049  1
2019 Kotliar M, Kartashov AV, Barski A. CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language. Gigascience. 8. PMID 31321430 DOI: 10.1093/Gigascience/Giz084  1
2019 Alavattam KG, Maezawa S, Sakashita A, Khoury H, Barski A, Kaplan N, Namekawa SH. Attenuated chromatin compartmentalization in meiosis and its maturation in sperm development. Nature Structural & Molecular Biology. PMID 30778237 DOI: 10.1038/S41594-019-0189-Y  1
2019 Miller DE, Forney C, Rochman M, Cranert S, Habel J, Rymer J, Lynch A, Schroeder C, Lee J, Sauder A, Smith Q, Chawla M, Trimarchi MP, Lu X, Fjellman E, ... ... Barski A, et al. Genetic, Inflammatory, and Epithelial Cell Differentiation Factors Control Expression of Human Calpain-14. G3 (Bethesda, Md.). PMID 30626591 DOI: 10.1534/G3.118.200901  1
2018 Kelly D, Kotliar M, Woo V, Jagannathan S, Whitt J, Moncivaiz J, Aronow BJ, Dubinsky MC, Hyams JS, Markowitz JF, Baldassano RN, Stephens MC, Walters TD, Kugathasan S, Haberman Y, ... ... Barski A, et al. Microbiota-sensitive epigenetic signature predicts inflammation in Crohn's disease. Jci Insight. 3. PMID 30232290 DOI: 10.1172/Jci.Insight.122104  1
2018 Maezawa S, Alavattam KG, Tatara M, Nagai R, Barski A, Namekawa SH. A rapidly evolved domain, the SCML2 DNA-binding (SDB) repeats, contributes to chromatin binding of mouse SCML2. Biology of Reproduction. PMID 30137219 DOI: 10.1093/Biolre/Ioy181  1
2018 Maezawa S, Hasegawa K, Alavattam KG, Funakoshi M, Sato T, Barski A, Namekawa SH. SCML2 promotes heterochromatin organization in late spermatogenesis. Journal of Cell Science. PMID 30097555 DOI: 10.1242/Jcs.217125  1
2018 Bouffi C, Barski A, Fulkerson PC. Chromatin Preparation from Murine Eosinophils for Genome-Wide Analyses. Methods in Molecular Biology (Clifton, N.J.). 1799: 265-274. PMID 29956158 DOI: 10.1007/978-1-4939-7896-0_20  1
2018 Vallabh S, Kartashov AV, Barski A. Analysis of ChIP-Seq and RNA-Seq Data with BioWardrobe. Methods in Molecular Biology (Clifton, N.J.). 1783: 343-360. PMID 29767371 DOI: 10.1007/978-1-4939-7834-2_17  1
2018 Grace JO, Malik A, Reichman H, Munitz A, Barski A, Fulkerson PC. Reuse of public, genome-wide, murine eosinophil expression data for hypotheses development. Journal of Leukocyte Biology. PMID 29758095 DOI: 10.1002/Jlb.1Ma1117-444R  1
2018 Maezawa S, Hasegawa K, Yukawa M, Kubo N, Sakashita A, Alavattam KG, Sin HS, Kartashov AV, Sasaki H, Barski A, Namekawa SH. Polycomb protein SCML2 facilitates H3K27me3 to establish bivalent domains in the male germline. Proceedings of the National Academy of Sciences of the United States of America. PMID 29686098 DOI: 10.1073/Pnas.1804512115  1
2018 Harley JB, Chen X, Pujato M, Miller D, Maddox A, Forney C, Magnusen AF, Lynch A, Chetal K, Yukawa M, Barski A, Salomonis N, Kaufman KM, Kottyan LC, Weirauch MT. Transcription factors operate across disease loci, with EBNA2 implicated in autoimmunity. Nature Genetics. PMID 29662164 DOI: 10.1038/S41588-018-0102-3  1
2018 Rochman Y, Dienger-Stambaugh K, Richgels PK, Lewkowich IP, Kartashov AV, Barski A, Khurana Hershey GK, Leonard WJ, Singh H. TSLP signaling in CD4T cells programs a pathogenic T helper 2 cell state. Science Signaling. 11. PMID 29535264 DOI: 10.1126/Scisignal.Aam8858  1
2018 Adams SR, Maezawa S, Alavattam KG, Abe H, Sakashita A, Shroder M, Broering TJ, Sroga Rios J, Thomas MA, Lin X, Price CM, Barski A, Andreassen PR, Namekawa SH. RNF8 and SCML2 cooperate to regulate ubiquitination and H3K27 acetylation for escape gene activation on the sex chromosomes. Plos Genetics. 14: e1007233. PMID 29462142 DOI: 10.1371/Journal.Pgen.1007233  1
2018 Kartashov A, Kotliar M, Barski A. CWL – airflow pipeline manager as a backend for BioWardrobe epigenomics data analysis platform F1000research. 7. DOI: 10.7490/F1000Research.1115847.1  1
2018 Harley J, Chen X, Pujato M, Miller D, Maddox A, Forney C, Magnusen A, Lynch A, Chetal K, Yukawa M, Barski A, Salomonis N, Kaufman K, Kottyan L, Weirauch M. GG-09 A role for EBNA2 in mechanisms that are responsible for lupus and other autoimmune diseases Lupus Science & Medicine. 5. DOI: 10.1136/Lupus-2018-Lsm.96  1
2017 Maezawa S, Yukawa M, Alavattam KG, Barski A, Namekawa SH. Dynamic reorganization of open chromatin underlies diverse transcriptomes during spermatogenesis. Nucleic Acids Research. PMID 29126117 DOI: 10.1093/Nar/Gkx1052  1
2017 Maezawa S, Hasegawa K, Yukawa M, Sakashita A, Alavattam KG, Andreassen PR, Vidal M, Koseki H, Barski A, Namekawa SH. Polycomb directs timely activation of germline genes in spermatogenesis. Genes & Development. PMID 28924034 DOI: 10.1101/Gad.302000.117  1
2017 Bolte C, Flood HM, Ren X, Jagannathan S, Barski A, Kalin TV, Kalinichenko VV. FOXF1 transcription factor promotes lung regeneration after partial pneumonectomy. Scientific Reports. 7: 10690. PMID 28878348 DOI: 10.1038/S41598-017-11175-3  1
2017 Yue M, Ogawa A, Yamada N, Charles Richard JL, Barski A, Ogawa Y. Xist RNA repeat E is essential for ASH2L recruitment to the inactive X and regulates histone modifications and escape gene expression. Plos Genetics. 13: e1006890. PMID 28686623 DOI: 10.1371/Journal.Pgen.1006890  0.04
2017 Stevens ML, Chaturvedi P, Rankin SA, Macdonald M, Jagannathan S, Yukawa M, Barski A, Zorn AM. Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional program. Development (Cambridge, England). PMID 28219948 DOI: 10.1242/Dev.145789  1
2017 Barski A, Cuddapah S, Kartashov AV, Liu C, Imamichi H, Yang W, Peng W, Lane HC, Zhao K. Rapid Recall Ability of Memory T cells is Encoded in their Epigenome. Scientific Reports. 7: 39785. PMID 28054639 DOI: 10.1038/Srep39785  1
2016 Bian F, Gao F, Kartashov AV, Jegga AG, Barski A, Das SK. Polycomb repressive complex 1 controls uterine decidualization. Scientific Reports. 6: 26061. PMID 27181215 DOI: 10.1038/Srep26061  1
2015 Jagannathan L, Jose CC, Arita A, Kluz T, Sun H, Zhang X, Yao Y, Kartashov AV, Barski A, Costa M, Cuddapah S. Nuclear Factor κB1/RelA Mediates Inflammation in Human Lung Epithelial Cells at Atmospheric Oxygen Levels. Journal of Cellular Physiology. PMID 26588041 DOI: 10.1002/Jcp.25262  1
2015 Chen CY, Lee JB, Liu B, Ohta S, Wang PY, Kartashov AV, Mugge L, Abonia JP, Barski A, Izuhara K, Rothenberg ME, Finkelman FD, Hogan SP, Wang YH. Induction of Interleukin-9-Producing Mucosal Mast Cells Promotes Susceptibility to IgE-Mediated Experimental Food Allergy. Immunity. PMID 26410628 DOI: 10.1016/J.Immuni.2015.08.020  1
2015 Bouffi C, Kartashov AV, Schollaert KL, Chen X, Bacon WC, Weirauch MT, Barski A, Fulkerson PC. Transcription Factor Repertoire of Homeostatic Eosinophilopoiesis. Journal of Immunology (Baltimore, Md. : 1950). 195: 2683-95. PMID 26268651 DOI: 10.4049/Jimmunol.1500510  1
2015 Kartashov AV, Barski A. BioWardrobe: an integrated platform for analysis of epigenomics and transcriptomics data. Genome Biology. 16: 158. PMID 26248465 DOI: 10.1186/S13059-015-0720-3  1
2015 Sin HS, Kartashov AV, Hasegawa K, Barski A, Namekawa SH. Poised chromatin and bivalent domains facilitate the mitosis-to-meiosis transition in the male germline. Bmc Biology. 13: 53. PMID 26198001 DOI: 10.1186/S12915-015-0159-8  1
2015 Rochman Y, Yukawa M, Kartashov AV, Barski A. Functional characterization of human T cell hyporesponsiveness induced by CTLA4-Ig. Plos One. 10: e0122198. PMID 25860138 DOI: 10.1371/Journal.Pone.0122198  1
2015 Hasegawa K, Sin HS, Maezawa S, Broering TJ, Kartashov AV, Alavattam KG, Ichijima Y, Zhang F, Bacon WC, Greis KD, Andreassen PR, Barski A, Namekawa SH. SCML2 establishes the male germline epigenome through regulation of histone H2A ubiquitination. Developmental Cell. 32: 574-88. PMID 25703348 DOI: 10.1016/J.Devcel.2015.01.014  1
2015 Rochman M, Kartashov AV, Caldwell JM, Collins MH, Stucke EM, Kc K, Sherrill JD, Herren J, Barski A, Rothenberg ME. Neurotrophic tyrosine kinase receptor 1 is a direct transcriptional and epigenetic target of IL-13 involved in allergic inflammation. Mucosal Immunology. 8: 785-98. PMID 25389033 DOI: 10.1038/Mi.2014.109  1
2015 Owsiński J, Stańczak J, Barski A, Sęp K, Sapiecha P. Graph based approach to the minimum hub problem in transportation network Proceedings of the 2015 Federated Conference On Computer Science and Information Systems, Fedcsis 2015. 1641-1648. DOI: 10.15439/2015F218  1
2015 Dietl T, Sato K, Fukushima T, Bonanni A, Jamet M, Barski A, Kuroda S, Tanaka M, Hai PN, Katayama-Yoshida H. Spinodal nanodecomposition in semiconductors doped with transition metals Reviews of Modern Physics. 87: 1311-1377. DOI: 10.1103/RevModPhys.87.1311  1
2015 Dalmas De Réotier P, Prestat E, Bayle-Guillemaud P, Boukhari M, Barski A, Marty A, Jamet M, Suter A, Prokscha T, Salman Z, Morenzoni E, Yaouanc A. Core-shell nanostructure in a Ge0.9Mn0.1 film observed via structural and magnetic measurements Physical Review B - Condensed Matter and Materials Physics. 91. DOI: 10.1103/PhysRevB.91.245408  1
2014 Liu YQ, Tainoff D, Boukhari M, Richard J, Barski A, Bayle-Guillemaud P, Hadji E, Bourgeois O. Sensitive 3-omega measurements on epitaxial thermoelectric thin films Iop Conference Series: Materials Science and Engineering. 68. DOI: 10.1088/1757-899X/68/1/012005  1
2014 Prestat E, Porret C, Favre-Nicolin V, Tainoff D, Boukhari M, Bayle-Guillemaud P, Jamet M, Barski A. Investigations of segregation phenomena in highly strained Mn-doped Ge wetting layers and Ge quantum dots embedded in silicon Applied Physics Letters. 104. DOI: 10.1063/1.4867651  1
2014 Tardif S, Titov A, Arras E, Slipukhina I, Hlil EK, Cherifi S, Joly Y, Jamet M, Barski A, Cibert J, Kulatov E, Uspenskii YA, Pochet P. X-ray magnetic circular dichroism in (Ge,Mn) compounds: Experiments and modeling Journal of Magnetism and Magnetic Materials. 354: 151-158. DOI: 10.1016/j.jmmm.2013.10.037  1
2013 Bouffi C, Rochman M, Zust CB, Stucke EM, Kartashov A, Fulkerson PC, Barski A, Rothenberg ME. IL-33 markedly activates murine eosinophils by an NF-κB-dependent mechanism differentially dependent upon an IL-4-driven autoinflammatory loop. Journal of Immunology (Baltimore, Md. : 1950). 191: 4317-25. PMID 24043894 DOI: 10.4049/Jimmunol.1301465  1
2013 Byeon B, Wang W, Barski A, Ranallo RT, Bao K, Schones DE, Zhao K, Wu C, Wu WH. The ATP-dependent chromatin remodeling enzyme Fun30 represses transcription by sliding promoter-proximal nucleosomes. The Journal of Biological Chemistry. 288: 23182-93. PMID 23779104 DOI: 10.1074/Jbc.M113.471979  1
2013 Rojas-Sánchez JC, Cubukcu M, Jain A, Vergnaud C, Portemont C, Ducruet C, Barski A, Marty A, Vila L, Attané JP, Augendre E, Desfonds G, Gambarelli S, Jaffrès H, George JM, et al. Spin pumping and inverse spin Hall effect in germanium Physical Review B - Condensed Matter and Materials Physics. 88. DOI: 10.1103/PhysRevB.88.064403  1
2013 Prestat E, Barski A, Bellet-Amalric E, Jacquot JF, Morel R, Tainoff D, Jain A, Porret C, Bayle-Guillemaud P, Jamet M. Structure and magnetism in strainem Ge1-x-ySnxMn y films grown on Ge(001) by low temperature molecular beam epitaxy Applied Physics Letters. 103. DOI: 10.1063/1.4813117  1
2012 Sin HS, Barski A, Zhang F, Kartashov AV, Nussenzweig A, Chen J, Andreassen PR, Namekawa SH. RNF8 regulates active epigenetic modifications and escape gene activation from inactive sex chromosomes in post-meiotic spermatids. Genes & Development. 26: 2737-48. PMID 23249736 DOI: 10.1101/Gad.202713.112  1
2012 Jain A, Rojas-Sanchez JC, Cubukcu M, Peiro J, Le Breton JC, Prestat E, Vergnaud C, Louahadj L, Portemont C, Ducruet C, Baltz V, Barski A, Bayle-Guillemaud P, Vila L, Attané JP, et al. Crossover from spin accumulation into interface states to spin injection in the germanium conduction band. Physical Review Letters. 109: 106603. PMID 23005314 DOI: 10.1103/Physrevlett.109.106603  1
2012 Arras E, Lançon F, Slipukhina I, Prestat I, Rovezzi M, Tardif S, Titov A, Bayle-Guillemaud P, D'Acapito F, Barski A, Favre-Nicolin V, Jamet M, Cibert J, Pochet P. Interface-driven phase separation in multifunctional materials: The case of the ferromagnetic semiconductor GeMn Physical Review B - Condensed Matter and Materials Physics. 85. DOI: 10.1103/PhysRevB.85.115204  1
2012 Mouton I, Lardé R, Talbot E, Cadel E, Genevois C, Blavette D, Baltz V, Prestat E, Bayle-Guillemaud P, Barski A, Jamet M. Composition and morphology of self-organized Mn-rich nanocolumns embedded in Ge: Correlation with the magnetic properties Journal of Applied Physics. 112. DOI: 10.1063/1.4768723  1
2012 Jain A, Vergnaud C, Peiro J, Le Breton JC, Prestat E, Louahadj L, Portemont C, Ducruet C, Baltz V, Marty A, Barski A, Bayle-Guillemaud P, Vila L, Attané JP, Augendre E, et al. Electrical and thermal spin accumulation in germanium Applied Physics Letters. 101. DOI: 10.1063/1.4733620  1
2011 Cuddapah S, Schones DE, Cui K, Roh TY, Barski A, Wei G, Rochman M, Bustin M, Zhao K. Genomic profiling of HMGN1 reveals an association with chromatin at regulatory regions. Molecular and Cellular Biology. 31: 700-9. PMID 21173166 DOI: 10.1128/Mcb.00740-10  1
2011 Jain A, Jamet M, Barski A, Devillers T, Yu IS, Porret C, Gambarelli S, Maurel V, Desfonds G, Jacquot JF. Magnetic anisotropy of (Ge,Mn) nanostructures Journal of Physics: Conference Series. 292. DOI: 10.1088/1742-6596/292/1/012011  1
2011 Jain A, Louahadj L, Peiro J, Le Breton JC, Vergnaud C, Barski A, Beigné C, Notin L, Marty A, Baltz V, Auffret S, Augendre E, Jaffrs H, George JM, Jamet M. Electrical spin injection and detection at Al2O 3/n-type germanium interface using three terminal geometry Applied Physics Letters. 99. DOI: 10.1063/1.3652757  1
2011 Yu IS, Jamet M, Marty A, Devillers T, Barski A, Beigné C, Bayle-Guillemaud P, Cibert J. Modeling magnetotransport in inhomogeneous (Ge,Mn) films Journal of Applied Physics. 109. DOI: 10.1063/1.3596575  1
2011 Jain A, Jamet M, Barski A, Devillers T, Yu IS, Porret C, Bayle-Guillemaud P, Favre-Nicolin V, Gambarelli S, Maurel V, Desfonds G, Jacquot JF, Tardif S. Structure and magnetism of Ge3Mn5 clusters Journal of Applied Physics. 109. DOI: 10.1063/1.3531222  1
2011 Porret C, Devillers T, Jain A, Dujardin R, Barski A. Importance of kinetics effects in the growth of germanium nanowires by vapourliquidsolid Molecular Beam Epitaxy Journal of Crystal Growth. 323: 334-339. DOI: 10.1016/j.jcrysgro.2010.11.056  1
2010 Barski A, Chepelev I, Liko D, Cuddapah S, Fleming AB, Birch J, Cui K, White RJ, Zhao K. Pol II and its associated epigenetic marks are present at Pol III-transcribed noncoding RNA genes. Nature Structural & Molecular Biology. 17: 629-34. PMID 20418881 DOI: 10.1038/Nsmb.1806  1
2010 Cuddapah S, Barski A, Zhao K. Epigenomics of T cell activation, differentiation, and memory. Current Opinion in Immunology. 22: 341-7. PMID 20226645 DOI: 10.1016/J.Coi.2010.02.007  1
2010 Besombes L, Ferrand D, Mariette H, Cibert J, Jamet M, Barski A. Spins in semiconducting nanostructures International Journal of Nanotechnology. 7: 641-667. DOI: 10.1504/IJNT.2010.031737  1
2010 Jamet M, Devillers T, Yu IS, Barski A, Bayle-Guillemaud P, Rothman J, Favre-Nicolin V, Tardif S, Cherifi S, Cibert J, Grenet L, Noé P, Calvo V, Warin P, Hartmann JM, et al. (Ge, Mn): A ferromagnetic semiconductor for spin injection in silicon International Journal of Nanotechnology. 7: 575-590. DOI: 10.1504/IJNT.2010.031734  1
2010 Tardif S, Favre-Nicolin V, Lançon F, Arras E, Jamet M, Barski A, Porret C, Bayle-Guillemaud P, Pochet P, Devillers T, Rovezzi M. Strain and correlation of self-organized Ge1-xMnx nanocolumns embedded in Ge (001) Physical Review B - Condensed Matter and Materials Physics. 82. DOI: 10.1103/PhysRevB.82.104101  1
2010 Yu IS, Jamet M, Devillers T, Barski A, Bayle-Guillemaud P, Beigné C, Rothman J, Baltz V, Cibert J. Spinodal decomposition to control magnetotransport in (Ge,Mn) films Physical Review B - Condensed Matter and Materials Physics. 82. DOI: 10.1103/PhysRevB.82.035308  1
2010 Jain A, Jamet M, Barski A, Devillers T, Porret C, Bayle-Guillemaud P, Gambarelli S, Maurel V, Desfonds G. Investigation of magnetic anisotropy of (Ge,Mn) nanocolumns Applied Physics Letters. 97. DOI: 10.1063/1.3505501  1
2010 Tardif S, Cherifi S, Jamet M, Devillers T, Barski A, Schmitz D, Darowski N, Thakur P, Cezar JC, Brookes NB, Mattana R, Cibert J. Exchange bias in GeMn nanocolumns: The role of surface oxidation Applied Physics Letters. 97. DOI: 10.1063/1.3476343  1
2010 Spiesser A, Olive-Mendez SF, Dau MT, Michez LA, Watanabe A, Le Thanh V, Glachant A, Derrien J, Barski A, Jamet M. Effect of thickness on structural and magnetic properties of Mn5Ge3 films grown on Ge(111) by solid phase epitaxy Thin Solid Films. 518: S113-S117. DOI: 10.1016/j.tsf.2009.10.067  1
2009 Cuddapah S, Barski A, Cui K, Schones DE, Wang Z, Wei G, Zhao K. Native chromatin preparation and Illumina/Solexa library construction. Cold Spring Harbor Protocols. 2009: pdb.prot5237. PMID 20147195 DOI: 10.1101/Pdb.Prot5237  1
2009 Barski A, Jothi R, Cuddapah S, Cui K, Roh TY, Schones DE, Zhao K. Chromatin poises miRNA- and protein-coding genes for expression. Genome Research. 19: 1742-51. PMID 19713549 DOI: 10.1101/Gr.090951.109  1
2009 Wang Z, Zang C, Cui K, Schones DE, Barski A, Peng W, Zhao K. Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes. Cell. 138: 1019-31. PMID 19698979 DOI: 10.1016/J.Cell.2009.06.049  1
2009 Barski A, Zhao K. Genomic location analysis by ChIP-Seq. Journal of Cellular Biochemistry. 107: 11-8. PMID 19173299 DOI: 10.1002/Jcb.22077  1
2009 Vahrenkamp N, Barski A, Asfour T, Dillmann R. Planning and execution of grasping motions on a humanoid robot 9th Ieee-Ras International Conference On Humanoid Robots, Humanoids09. 639-645. DOI: 10.1109/ICHR.2009.5379580  1
2009 Barski A, Jothi R, Cuddapah S, Cui K, Roh TY, Schones DE, Zhao K. Chromatin poises miRNA- and protein-coding genes for expression (Genome Research (2009) 19 (1742-1751)) Genome Research. 19: 2343.  1
2008 Jothi R, Cuddapah S, Barski A, Cui K, Zhao K. Genome-wide identification of in vivo protein-DNA binding sites from ChIP-Seq data. Nucleic Acids Research. 36: 5221-31. PMID 18684996 DOI: 10.1093/Nar/Gkn488  1
2008 Wang Z, Zang C, Rosenfeld JA, Schones DE, Barski A, Cuddapah S, Cui K, Roh TY, Peng W, Zhang MQ, Zhao K. Combinatorial patterns of histone acetylations and methylations in the human genome. Nature Genetics. 40: 897-903. PMID 18552846 DOI: 10.1038/Ng.154  1
2008 Barski A, Pregizer S, Frenkel B. Identification of transcription factor target genes by ChIP display. Methods in Molecular Biology (Clifton, N.J.). 455: 177-90. PMID 18463820 DOI: 10.1007/978-1-59745-104-8_14  1
2008 Schones DE, Cui K, Cuddapah S, Roh TY, Barski A, Wang Z, Wei G, Zhao K. Dynamic regulation of nucleosome positioning in the human genome. Cell. 132: 887-98. PMID 18329373 DOI: 10.1016/J.Cell.2008.02.022  1
2008 Tardif S, Yu IS, Devillers T, Jamet M, Cherifi S, Cibert J, Barski A, Bayle-Guillemaud P, Bellet-Amalric E. From diluted magnetic semiconductors to self-organized nanocolumns of GeMn in germanium Proceedings of Spie - the International Society For Optical Engineering. 7036. DOI: 10.1117/12.798296  1
2008 Rovezzi M, Devillers T, Arras E, D'Acapito F, Barski A, Jamet M, Pochet P. Atomic structure of Mn-rich nanocolumns probed by x-ray absorption spectroscopy Applied Physics Letters. 92. DOI: 10.1063/1.2949077  1
2008 Olive-Mendez S, Spiesser A, Michez LA, Le Thanh V, Glachant A, Derrien J, Devillers T, Barski A, Jamet M. Epitaxial growth of Mn5Ge3/Ge(111) heterostructures for spin injection Thin Solid Films. 517: 191-196. DOI: 10.1016/j.tsf.2008.08.090  1
2007 Prescott J, Jariwala U, Jia L, Cogan JP, Barski A, Pregizer S, Shen HC, Arasheben A, Neilson JJ, Frenkel B, Coetzee GA. Androgen receptor-mediated repression of novel target genes. The Prostate. 67: 1371-83. PMID 17624924 DOI: 10.1002/Pros.20623  1
2007 Jariwala U, Prescott J, Jia L, Barski A, Pregizer S, Cogan JP, Arasheben A, Tilley WD, Scher HI, Gerald WL, Buchanan G, Coetzee GA, Frenkel B. Identification of novel androgen receptor target genes in prostate cancer. Molecular Cancer. 6: 39. PMID 17553165 DOI: 10.1186/1476-4598-6-39  1
2007 Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K. High-Resolution Profiling of Histone Methylations in the Human Genome Cell. 129: 823-837. PMID 17512414 DOI: 10.1016/J.Cell.2007.05.009  1
2007 Pregizer S, Barski A, Gersbach CA, García AJ, Frenkel B. Identification of novel Runx2 targets in osteoblasts: cell type-specific BMP-dependent regulation of Tram2. Journal of Cellular Biochemistry. 102: 1458-71. PMID 17486635 DOI: 10.1002/Jcb.21366  1
2007 Devillers T, Jamet M, Barski A, Poydenot V, Bayle-Guillemaud P, Bellet-Amalric E, Cherifi S, Cibert J. Structure and magnetism of self-organized Ge1-x Mnx nanocolumns on Ge(001) Physical Review B - Condensed Matter and Materials Physics. 76. DOI: 10.1103/PhysRevB.76.205306  1
2007 Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K. Response: Mapping Nucleosome Positions Using ChIP-Seq Data Cell. 131: 832-833. DOI: 10.1016/J.Cell.2007.11.018  1
2007 Devillers T, Jamet M, Barski A, Poydenot V, Dujardin R, Guillemaud PB, Rothman J, Amalric EB, Cibert J, Mattana R, Tatarenko S. Structural and magnetic properties of GeMn layers; High Curie temperature ferromagnetism induced by self organized GeMn nano-columns Physica Status Solidi (a) Applications and Materials Science. 204: 130-135. DOI: 10.1002/pssa.200673026  1
2006 Jamet M, Barski A, Devillers T, Poydenot V, Dujardin R, Bayle-Guillemaud P, Rothman J, Bellet-Amalric E, Marty A, Cibert J, Mattana R, Tatarenko S. High-Curie-temperature ferromagnetism in self-organized Ge1-xMnx nanocolumns. Nature Materials. 5: 653-9. PMID 16845420 DOI: 10.1038/nmat1686  1
2006 Dujardin R, Poydenot V, Devillers T, Favre-Nicolin V, Gentile P, Barski A. Growth mechanism of Si nanowhiskers and SiGe heterostructures in Si nanowhiskers: X-ray scattering and electron microscopy investigations Applied Physics Letters. 89. DOI: 10.1063/1.2360225  1
2006 Dujardin R, Poydenot V, Schülli TU, Renaud G, Ulrich O, Barski A, Derivaz M, Colonna S, Metzger T. Strain and composition of ultrasmall Ge quantum dots studied by x-ray scattering and in situ surface x-ray absorption spectroscopy Journal of Applied Physics. 99. DOI: 10.1063/1.2181277  1
2006 Poydenot V, Dujardin R, Rouvière JL, Barski A, Mezière J, Fournel F. Ordered growth of germanium dots induced by the strain field of tilt dislocations in molecular bonded silicon (0 0 1) thin films Surface Science. 600: L135-L138. DOI: 10.1016/j.susc.2006.03.020  1
2006 Devillers T, Jalmet M, Barski A, Poydenot V, Dujardin R, Guillemaud PB, Rothman J, Amalric EB, Cibert J, Mattana R, Tatarenko S. Ferromagnetism of self-organized Ge1-xMnx nano-pillars Physica Status Solidi (C) Current Topics in Solid State Physics. 3: 4123-4126. DOI: 10.1002/pssc.200672806  1
2005 Poydenot V, Dujardin R, Fournel F, Rouvière JL, Barski A. Highly ordered germanium nanostructures grown by molecular beam epitaxy on twist-bonded silicon (0 0 1) substrates Journal of Crystal Growth. 278: 83-87. DOI: 10.1016/j.jcrysgro.2004.12.167  1
2004 Barski A, Frenkel B. ChIP Display: novel method for identification of genomic targets of transcription factors. Nucleic Acids Research. 32: e104. PMID 15252151 DOI: 10.1093/Nar/Gnh097  1
2004 Poydenot V, Dujardin R, Rouvière JL, Barski A, Fournel F. Ordered growth of germanium hut islands on Si (001) molecular bonded substrates Applied Physics Letters. 85: 5700-5702. DOI: 10.1063/1.1829795  1
2004 Derivaz M, Noé P, Dianoux R, Barski A, Coati A, Garreau Y, Alandi C. Grazing incidence x-ray diffraction and atomic force microscopy investigations of germanium dots grown on silicon (001) by successive depositions of germanium through a thin silicon oxide layer Applied Physics Letters. 84: 3295-3297. DOI: 10.1063/1.1715150  1
2004 Aït-Mansour K, Dentel D, Bischoff JL, Kubler L, Diani M, Barski A, Derivaz M, Noé P. Ge quantum dots on a large band gap semiconductor: The first growth stages on 4H-SiC(0 0 0 1) Physica E: Low-Dimensional Systems and Nanostructures. 23: 428-434. DOI: 10.1016/j.physe.2003.12.139  1
2003 Luppen CA, Leclerc N, Noh T, Barski A, Khokhar A, Boskey AL, Smith E, Frenkel B. Brief bone morphogenetic protein 2 treatment of glucocorticoid-inhibited MC3T3-E1 osteoblasts rescues commitment-associated cell cycle and mineralization without alteration of Runx2. The Journal of Biological Chemistry. 278: 44995-5003. PMID 12933820 DOI: 10.1074/Jbc.M306730200  1
2003 Decossas S, Patrone L, Bonnot AM, Comin F, Derivaz M, Barski A, Chevrier J. Nanomanipulation by atomic force microscopy of carbon nanotubes on a nanostructured surface Surface Science. 543: 57-62. DOI: 10.1016/S0039-6028(03)00919-1  1
2002 Godlewski M, Szczerbakow A, Kopalko K, Lusakowska E, Butcher KSA, Goldys EM, Tansley TL, Barski A. Atomic layer epitaxy of ZnO for substrates for GaN epitaxy Conference On Optoelectronic and Microelectronic Materials and Devices, Proceedings, Commad. 2002: 13-16. DOI: 10.1109/COMMAD.2002.1237178  1
2002 Derivaz M, Noé P, Dianoux R, Barski A, Schülli T, Metzger TH. Growth of highly strained germanium dots on Si(001) covered by a silicon nitride layer Applied Physics Letters. 81: 3843-3845. DOI: 10.1063/1.1519354  1
2002 Derivaz M, Noé P, Rouviére JL, Buttard D, Sotta D, Gentil P, Barski A. Epitaxial growth of germanium dots on silicon (001) surface covered by a very thin dielectric layer Materials Science and Engineering B: Solid-State Materials For Advanced Technology. 89: 191-195. DOI: 10.1016/S0921-5107(01)00848-0  1
2002 Derivaz M, Noé P, Jalabert D, Rouviére JL, Buttard D, Sotta D, Barski A. Epitaxial growth of germanium dots on Si (001) surface covered by a very thin silicon nitride layer Microelectronic Engineering. 61: 643-649. DOI: 10.1016/S0167-9317(02)00492-6  1
2001 Simon J, Langer R, Barski A, Zervos M, Pelekanos NT. Residual Doping Effects on the Amplitude of Polarization-Induced Electric fields in GaN/AlGaN Quantum Wells Physica Status Solidi (a) Applied Research. 188: 867-870. DOI: 10.1002/1521-396X(200112)188:2<867::AID-PSSA867>3.0.CO;2-K  1
2001 Barski A, Michalewski E, Pashkin M, Rakhmanova I, Smirnov A. Application of decision support tools in organization management Proceedings of the International Conference On Systems Science. 3: 349-356.  1
2000 Godlewski M, Goldys EM, Phillips MR, Ivanov VY, Langer R, Barski A. Photo- and cathodoluminescence investigations of piezoelectric GaN/AlGaN quantum well structures Ieee Semiconducting and Semi-Insulating Materials Conference, Simc. 2000: 31-34. DOI: 10.1109/SIM.2000.939192  1
2000 Goldys EM, Godlewski M, Langer R, Barski A. Surface morphology of cubic and wurtzite GaN films Applied Surface Science. 153: 143-149. DOI: 10.1016/S0169-4332(99)00342-6  1
2000 Simon J, Langer R, Barski A, Pelekanos NT. Spontaneous polarization effects in GaN/AlxGa1-xN quantum wells Physical Review B - Condensed Matter and Materials Physics. 61: 7211-7214.  1
2000 Barski A, Derivaz M, Rouvière JL, Buttard D. Epitaxial growth of germanium dots on Si(001) surface covered by a very thin silicon oxide layer Applied Physics Letters. 77: 3541-3543.  1
2000 Godlewski M, Goldys EM, Phillips MR, Langer R, Barski A. Cathodoluminescence depth-profiling studies of GaN/AlGaN quantum-well structures Journal of Materials Research. 15: 495-501.  1
2000 Godlewski M, Szczerbakow A, Ivanov VY, Ghali M, Langer R, Barski A. In search for substrate materials for GaN epitaxy: optical properties of thin films of ZnO grown by atomic layer epitaxy Electron Technology (Warsaw). 33: 416-420.  1
1999 Langer R, Barski A, Barbier A, Renaud G, Leszczynski M, Grzegory I, Porowski S. Strain relaxation in AlN epitaxial layers grown on GaN single crystals Journal of Crystal Growth. 205: 31-35. DOI: 10.1016/S0022-0248(99)00240-7  1
1999 Sauvage-Simkin M, Garreau Y, Barski A, Langer R, Cvetko D, Floreano L, Gotter R, Santaniello A, Verdini A. X-ray photoelectron spectroscopic investigation of the GaAs nitridation mechanism with an ECR plasma source Physica Status Solidi (a) Applied Research. 176: 671-676. DOI: 10.1002/(SICI)1521-396X(199911)176:1<671::AID-PSSA671>3.0.CO;2-E  1
1999 Langer R, Simon J, Konovalov O, Pelekanos NT, André R, Barski A. Strong piezoelectric effects in unstrained GaN quantum wells Materials Research Society Symposium - Proceedings. 537: G3.19.  1
1999 Goldys EM, Godlewski M, Langer R, Barski A, Bergman P, Monemar B. Analysis of the red optical emission in cubic GaN grown by molecular-beam epitaxy Physical Review B - Condensed Matter and Materials Physics. 60: 5464-5469.  1
1999 Langer R, Simon J, Ortiz V, Pelekanos NT, Barski A, André R, Godlewski M. Giant electric fields in unstrained GaN single quantum wells Applied Physics Letters. 74: 3827-3829.  1
1999 Langer R, Barski A, Simon J, Pelekanos NT, Konovalov O, André R, Dang LS. High-reflectivity GaN/GaAIN Bragg mirrors at blue/green wavelengths grown by molecular beam epitaxy Applied Physics Letters. 74: 3610-3612.  1
1999 Leszczynski M, Prystawko P, Suski T, Lucznik B, Domagala J, Bak-Misiuk J, Stonert A, Turos A, Langer R, Barski A. Lattice parameters of GaN single crystals, homoepitaxial layers and heteroepitaxial layers on sapphire Journal of Alloys and Compounds. 286: 271-275.  1
1999 Domagala J, Leszczynski M, Prystawko P, Suski T, Langer R, Barski A, Bremser M. Strain relaxation of AlxGa1-xN epitaxial layers on GaN and SiC substrates Journal of Alloys and Compounds. 286: 284-288.  1
1999 Goldys EM, Godlewski M, Drozdowicz-Tomsia K, Langer R, Barski A. Optical emission bands in cubic GaN grown by MBE Conference On Optoelectronic and Microelectronic Materials and Devices, Proceedings, Commad. 202-205.  1
1998 Godlewski M, Goldys EM, Phillips MR, Langer R, Barski A. Influence of the surface morphology on the yellow and "edge" emissions in wurtzite GaN Applied Physics Letters. 73: 3686-3688. DOI: 10.1063/1.122863  1
1998 Godlewski M, Goldys EM, Philips MR, Bergman JP, Monemar B, Langer R, Barski A. Morphology and optical properties of cubic phase GaN epilayers grown on (001) Si Mrs Internet Journal of Nitride Semiconductor Research. 3.  1
1998 Godlewski M, Suski T, Grzegory I, Porowski S, Langer R, Barski A, Bergman JP, Monemar B, Goldys EM, Phillips MR. Mechanisms of yellow and red photoluminescence in wurtzite and cubic GaN Acta Physica Polonica A. 94: 326-330.  1
1998 Langer R, Simon J, Konovalov O, Pelekanos N, Barski A, Leszczỹnski M. X-ray reciprocal lattice mapping and photoluminescence of GaN/GaAlN multiple quantum wells; strain induced phenomena Mrs Internet Journal of Nitride Semiconductor Research. 3.  1
1998 Godlewski M, Ivanov VY, Bergman JP, Monemar B, Barski A, Langer R. Optical properties of cubic phase GaN epilayers grown by molecular beam epitaxy on SiC/silicon (100) substrates Materials Science Forum. 264: 1343-1346.  1
1998 Bourret A, Barski A, Rouvière JL, Renaud G, Barbier A. Growth of aluminum nitride on (111) silicon: Microstructure and interface structure Journal of Applied Physics. 83: 2003-2009.  1
1997 Godlewski M, Bergman JP, Monemar B, Rossner U, Langer R, Barski A. Optical properties of GaN epilayers grown on Si (111) and Si (001) substrates Materials Science and Engineering B. 50: 113-116.  1
1997 Godlewski M, Ivanov VY, Kamińska A, Zuo HY, Goldys EM, Tansley TL, Barski A, Rossner U, Rouvicre JL, Arlery M, Grzegory I, Suski T, Porowski S, Bergman JP, Monemar B. On the origin of the yellow donor-acceptor pair emission in GaN Materials Science Forum. 258: 1149-1154.  1
1996 Barski A, Rössner U, Rouviere JL, Arlery M. Epitaxial growth of cubic GaN and AlN on Si(001) Mrs Internet Journal of Nitride Semiconductor Research. 1: 5d.  1
1996 Leszczyński M, Teisseyre H, Suski T, Grzegory I, Boćkowski M, Jun J, Pałosz B, Porowski S, Pakuła K, Baranowski JM, Barski A. Thermal expansion of GaN bulk crystals and homoepitaxial layers Acta Physica Polonica A. 90: 887-890.  1
1996 Godlewski M, Bergman JP, Monemar B, Rossner U, Barski A. Optical properties of GaN Epilayers grown by gas source molecular beam epitaxy on AlN buffer layer on (111) Si Acta Physica Polonica A. 90: 789-792.  1
1996 Godlewski M, Bergman JP, Monemar B, Rossner U, Barski A. Time-resolved photoluminescence studies of GaN epilayers grown by gas source molecular beam epitaxy on an AIN buffer layer on (111) Si Applied Physics Letters. 69: 2089-2091.  1
1996 Rössner U, Brun-Le Cunff D, Barski A, Daudin B. Compact electron cyclotron resonance plasma source for molecular beam epitaxy applications Journal of Vacuum Science and Technology a: Vacuum, Surfaces and Films. 14: 2655-2658.  1
1996 Rossner U, Rouviere JL, Bourret A, Barski A. ECR-MBE and GSMBE of gallium nitride on Si(111) Materials Research Society Symposium - Proceedings. 395: 145-150.  1
1995 Rössner U, Barski A, Rouvière JL, Bourret A, Massies J, Deparis C, Grandjean N. How to induce the epitaxial growth of gallium nitride on Si(001) Materials Science and Engineering B. 29: 74-77. DOI: 10.1016/0921-5107(94)04003-M  1
1991 Garcia JC, Maurel P, Bove P, Hirtz JP, Barski A. Chemical beam epitaxy growth of GaAs/Ga0.5In0.5P heterostructures: growth kinetics, electrical and optical properties Journal of Crystal Growth. 111: 578-583. DOI: 10.1016/0022-0248(91)91043-A  1
1988 Garcia JC, Beye AC, Contour JP, Neu G, Massies J, Barski A. Reduced carbon acceptor incorporation in GaAs grown by molecular beam epitaxy using dimer arsenic Applied Physics Letters. 52: 1596-1598. DOI: 10.1063/1.99092  1
1988 Rostkowska H, Barski A, Szczepaniak K, Szczesniak M, Person WB. The tautomeric equilibria of thioanalogues of nucleic acids: spectroscopic studies of 2-thiouracils in the vapour phase and in low temperature matrices Journal of Molecular Structure. 176: 137-147. DOI: 10.1016/0022-2860(88)80237-0  1
1987 Garcia JC, Barski A, Contour JP, Massies J. Dimer arsenic source using a high efficiency catalytic cracking oven for molecular beam epitaxy Applied Physics Letters. 51: 593-595. DOI: 10.1063/1.98987  1
1986 Rossi G, Barski A. Observation of occupied 5d states in f.c.c. Yb metal Solid State Communications. 57: 277-281. DOI: 10.1016/0038-1098(86)90157-2  1
1985 Rossi G, Barski A. Electron-emission processes following 5p photoexcitation in fcc Yb Physical Review B. 32: 5492-5495. DOI: 10.1103/PhysRevB.32.5492  1
1985 Bertrand Y, Barski A, Pinchaux R. Experimental valence-band structure of tin disulfide SnS2 Physical Review B. 31: 5494-5496. DOI: 10.1103/PhysRevB.31.5494  1
1985 Barski A, Pinchaux R, Rossi G. Submonolayer to monolayer transition in the growth of the Au:InP(110) interface Surface Science. 154: 629-638. DOI: 10.1016/0039-6028(85)90054-8  1
1985 Thiry P, Barski A, Jezequel G, Pinchaux R, Petroff Y. INDIRECT TRANSITIONS IN PHOTOEMISSION OF SEMICONDUCTORS . 1059-1062.  1
1984 Solal F, Jezequel G, Barski A, Steiner P, Pinchaux R, Petroff Y. Ge(111)2×1: -Bonded chain model or not? Physical Review Letters. 52: 360-363. DOI: 10.1103/PhysRevLett.52.360  1
1984 Jezequel G, Barski A, Steiner P, Solal F, Roubin P, Pinchaux R, Petroff Y. Indirect transitions in angle-resolved photoemission Physical Review B. 30: 4833-4836. DOI: 10.1103/PhysRevB.30.4833  1
1984 Solal F, Jezequel G, Houzay F, Barski A, Pinchaux R. Angle resolved photoemission valence band dispersions E(k) for gaP Solid State Communications. 52: 37-40. DOI: 10.1016/0038-1098(84)90713-0  1
1983 Jezequel G, Barski A, Pinchaux R, Petroff Y. RECONSTRUCTION OF SEMICONDUCTUR SURFACES . 119.  1
1980 Nowak MJ, Szczepaniak K, Barski A, Shugar D. Tautomeric equilibria of 2(4)-monooxopyrimidines in the gas phase, in low-temperature matrices and in solution Journal of Molecular Structure. 62: 47-69. DOI: 10.1016/0022-2860(80)85222-7  1
1980 Szczepaniak K, Barski A, Baranska H, Shugar D. VIBRATIONAL SPECTRA AND STRUCTURE OF 2(4)-THIOURACILS IN THE VAPOR AND SOLID PHASES . 590-591.  1
1978 Nowak MJ, Barski A, Szczepaniak K, Shugar D. Spectroscopic studies on vapour phase tautomerism of natural bases found in nucleic acids Zeitschrift Fur Naturforschung - Section C Journal of Biosciences. 33: 876-883. DOI: 10.1515/znc-1978-11-1213  1
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