Carol Robin Buell - Publications

Affiliations: 
1997-1999 Louisiana State University, Baton Rouge, LA, United States 
 1999-2007 The Institute for Genomic Research 
 2007- Michigan State University, East Lansing, MI 
Area:
Genome biology, bioinformatics, plant biology
Website:
https://plantbiology.natsci.msu.edu/directory/robin-buell/

149 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Lichman BR, Godden GT, Hamilton JP, Palmer L, Kamileen MO, Zhao D, Vaillancourt B, Wood JC, Sun M, Kinser TJ, Henry LK, Rodriguez-Lopez C, Dudareva N, Soltis DE, Soltis PS, ... Buell CR, et al. The evolutionary origins of the cat attractant nepetalactone in catnip. Science Advances. 6: eaba0721. PMID 32426505 DOI: 10.1126/Sciadv.Aba0721  0.32
2019 Gemenet DC, da Silva Pereira G, De Boeck B, Wood JC, Mollinari M, Olukolu BA, Diaz F, Mosquera V, Ssali RT, David M, Kitavi MN, Burgos G, Felde TZ, Ghislain M, Carey E, ... ... Buell CR, et al. Quantitative trait loci and differential gene expression analyses reveal the genetic basis for negatively associated β-carotene and starch content in hexaploid sweetpotato [Ipomoea batatas (L.) Lam.]. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 31595335 DOI: 10.1007/S00122-019-03437-7  0.32
2019 Pham GM, Braz GT, Conway M, Crisovan E, Hamilton JP, Laimbeer FPE, Manrique-Carpintero N, Newton L, Douches DS, Jiang J, Veilleux RE, Buell CR. Genome-wide Inference of Somatic Translocation Events During Potato Dihaploid Production. The Plant Genome. 12. PMID 31290929 DOI: 10.3835/plantgenome2018.10.0079  0.52
2019 Gage JL, Vaillancourt B, Hamilton JP, Manrique-Carpintero NC, Gustafson TJ, Barry K, Lipzen A, Tracy WF, Mikel MA, Kaeppler SM, Buell CR, de Leon N. Multiple Maize Reference Genomes Impact the Identification of Variants by Genome-Wide Association Study in a Diverse Inbred Panel. The Plant Genome. 12. PMID 31290926 DOI: 10.3835/plantgenome2018.09.0069  0.32
2019 Zeng Z, Zhang W, Marand AP, Zhu B, Buell CR, Jiang J. Cold stress induces enhanced chromatin accessibility and bivalent histone modifications H3K4me3 and H3K27me3 of active genes in potato. Genome Biology. 20: 123. PMID 31208436 DOI: 10.1186/s13059-019-1731-2  0.52
2019 Colle M, Leisner CP, Wai CM, Ou S, Bird KA, Wang J, Wisecaver JH, Yocca AE, Alger EI, Tang H, Xiong Z, Callow P, Ben-Zvi G, Brodt A, Baruch K, ... ... Buell CR, et al. Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry. Gigascience. PMID 30715294 DOI: 10.1093/Gigascience/Giz012  0.32
2019 Zhao D, Hamilton JP, Bhat WW, Johnson SR, Godden GT, Kinser TJ, Boachon B, Dudareva N, Soltis DE, Soltis PS, Hamberger B, Buell CR. A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways. Gigascience. PMID 30698701 DOI: 10.1093/Gigascience/Giz005  0.32
2019 Hoopes GM, Hamilton JP, Wood JC, Esteban E, Pasha A, Vaillancourt B, Provart NJ, Buell CR. An updated gene atlas for maize reveals organ-specific and stress-induced genes. The Plant Journal : For Cell and Molecular Biology. 97: 1154-1167. PMID 30537259 DOI: 10.1111/tpj.14184  0.32
2018 Lau KH, Del Rosario Herrera M, Crisovan E, Wu S, Fei Z, Khan MA, Buell CR, Gemenet DC. Transcriptomic analysis of sweet potato under dehydration stress identifies candidate genes for drought tolerance. Plant Direct. 2: e00092. PMID 31245692 DOI: 10.1002/pld3.92  0.32
2018 Wu S, Lau KH, Cao Q, Hamilton JP, Sun H, Zhou C, Eserman L, Gemenet DC, Olukolu BA, Wang H, Crisovan E, Godden GT, Jiao C, Wang X, Kitavi M, ... ... Buell CR, et al. Genome sequences of two diploid wild relatives of cultivated sweetpotato reveal targets for genetic improvement. Nature Communications. 9: 4580. PMID 30389915 DOI: 10.1038/s41467-018-06983-8  0.52
2018 Franke J, Kim J, Hamilton JP, Zhao D, Pham GM, Wiegert-Rininger K, Crisovan E, Newton L, Vaillancourt B, Tatsis E, Buell CR, O'Connor SE. Gene discovery in Gelsemium highlights conserved gene clusters in monoterpene indole alkaloid biosynthesis. Chembiochem : a European Journal of Chemical Biology. PMID 30300974 DOI: 10.1002/Cbic.201800592  1
2018 Manrique-Carpintero NC, Coombs JJ, Pham GM, Laimbeer FPE, Braz GT, Jiang J, Veilleux RE, Buell CR, Douches DS. Genome Reduction in Tetraploid Potato Reveals Genetic Load, Haplotype Variation, and Loci Associated With Agronomic Traits. Frontiers in Plant Science. 9: 944. PMID 30018631 DOI: 10.3389/fpls.2018.00944  0.52
2018 Hardigan MA, Laimbeer FPE, Hamilton JP, Vaillancourt B, Douches DS, Farré EM, Veilleux RE, Buell CR. Reply to Huang et al.: Avoiding "one-size-fits-all" approaches to variant discovery. Proceedings of the National Academy of Sciences of the United States of America. PMID 29934402 DOI: 10.1073/pnas.1807622115  0.32
2018 Boachon B, Buell CR, Crisovan E, Dudareva N, Garcia N, Godden G, Henry L, Kamileen MO, Kates HR, Kilgore MB, Lichman BR, Mavrodiev EV, Newton L, Rodriguez-Lopez C, O'Connor SE, et al. Phylogenomic Mining of the Mints Reveals Multiple Mechanisms Contributing to the Evolution of Chemical Diversity in Lamiaceae. Molecular Plant. PMID 29920355 DOI: 10.1016/J.Molp.2018.06.002  0.32
2018 Evans J, Sanciangco MD, Lau KH, Crisovan E, Barry K, Daum C, Hundley H, Jenkins J, Kennedy M, Kunde-Ramamoorthy G, Vaillancourt B, Acharya A, Schmutz J, Saha M, Kaeppler SM, ... ... Buell CR, et al. Extensive Genetic Diversity is Present within North American Switchgrass Germplasm. The Plant Genome. 11. PMID 29505643 DOI: 10.3835/plantgenome2017.06.0055  0.32
2018 Zhao D, Hamilton JP, Vaillancourt B, Zhang W, Eizenga GC, Cui Y, Jiang J, Buell CR, Jiang N. The unique epigenetic features of Pack-MULEs and their impact on chromosomal base composition and expression spectrum. Nucleic Acids Research. PMID 29415183 DOI: 10.1093/Nar/Gky091  0.52
2018 Leisner CP, Hamilton JP, Crisovan E, Manrique-Carpintero NC, Marand AP, Newton L, Pham GM, Jiang J, Douches DS, Jansky SH, Buell CR. Genome sequence of M6, a diploid inbred clone of the high glycoalkaloid-producing tuber-bearing potato species Solanum chacoense, reveals residual heterozygosity. The Plant Journal : For Cell and Molecular Biology. PMID 29405524 DOI: 10.1111/tpj.13857  0.52
2018 Zhao D, Hamilton JP, Vaillancourt B, Zhang W, Eizenga GC, Cui Y, Jiang J, Buell CR, Jiang N. The unique epigenetic features of Pack-MULEs and their impact on chromosomal base composition and expression spectrum. Nucleic Acids Research. PMID 29365184 DOI: 10.1093/nar/gky025  0.52
2017 Hoopes GM, Hamilton JP, Kim J, Zhao D, Wiegert-Rininger K, Crisovan E, Buell CR. Genome Assembly and Annotation of the Medicinal Plant Calotropis gigantea, a Producer of Anti-Cancer and Anti-Malarial Cardenolides. G3 (Bethesda, Md.). PMID 29237703 DOI: 10.1534/G3.117.300331  1
2017 Sherden NH, Lichman B, Caputi L, Zhao D, Kamileen MO, Buell CR, O'Connor SE. Identification of iridoid synthases from Nepeta species: Iridoid cyclization does not determine nepetalactone stereochemistry. Phytochemistry. 145: 48-56. PMID 29091815 DOI: 10.1016/J.Phytochem.2017.10.004  0.32
2017 Hardigan MA, Laimbeer FPE, Newton L, Crisovan E, Hamilton JP, Vaillancourt B, Wiegert-Rininger K, Wood JC, Douches DS, Farré EM, Veilleux RE, Buell CR. Genome diversity of tuber-bearing Solanum uncovers complex evolutionary history and targets of domestication in the cultivated potato. Proceedings of the National Academy of Sciences of the United States of America. PMID 29087343 DOI: 10.1073/pnas.1714380114  0.32
2017 Marand AP, Jansky SH, Zhao H, Leisner CP, Zhu X, Zeng Z, Crisovan E, Newton L, Hamernik AJ, Veilleux RE, Buell CR, Jiang J. Meiotic crossovers are associated with open chromatin and enriched with Stowaway transposons in potato. Genome Biology. 18: 203. PMID 29084572 DOI: 10.1186/s13059-017-1326-8  0.52
2017 Diepenbrock CH, Kandianis CB, Lipka AE, Magallanes-Lundback M, Vaillancourt B, Góngora-Castillo E, Wallace JG, Cepela J, Mesberg A, Bradbury P, Ilut DC, Mateos-Hernandez M, Hamilton J, Owens BF, Tiede T, ... ... Buell CR, et al. Novel Loci Underlie Natural Variation in Vitamin E Levels in Maize Grain. The Plant Cell. PMID 28970338 DOI: 10.1105/tpc.17.00475  0.84
2017 Zhao D, Hamilton JP, Pham GM, Crisovan E, Wiegert-Rininger K, Vaillancourt B, DellaPenna D, Buell CR. De novo genome assembly of Camptotheca acuminata, a natural source of the anti-cancer compound camptothecin. Gigascience. 6: 1-7. PMID 28922823 DOI: 10.1093/gigascience/gix065  0.56
2017 Leisner CP, Kamileen MO, Conway ME, O'Connor SE, Buell CR. Differential iridoid production as revealed by a diversity panel of 84 cultivated and wild blueberry species. Plos One. 12: e0179417. PMID 28609455 DOI: 10.1371/journal.pone.0179417  0.32
2016 Zhao D, Hamilton JP, Hardigan M, Yin D, He T, Vaillancourt B, Reynoso M, Pauluzzi G, Funkhouser S, Cui Y, Bailey-Serres J, Jiang J, Buell CR, Jiang N. Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation. G3 (Bethesda, Md.). PMID 27852012 DOI: 10.1534/G3.116.036020  0.52
2016 Stapleton JA, Kim J, Hamilton JP, Wu M, Irber LC, Maddamsetti R, Briney B, Newton L, Burton DR, Brown CT, Chan C, Buell CR, Whitehead TA. Haplotype-Phased Synthetic Long Reads from Short-Read Sequencing. Plos One. 11: e0147229. PMID 26789840 DOI: 10.1371/Journal.Pone.0147229  1
2016 Hirsch CD, Buell CR, Hirsch CN. A Toolbox of Potato Genetic and Genomic Resources American Journal of Potato Research. 93: 21-32. DOI: 10.1007/s12230-015-9486-0  1
2015 Evans J, Crisovan E, Barry K, Daum C, Jenkins J, Kunde-Ramamoorthy G, Nandety A, Ngan CY, Vaillancourt B, Wei CL, Schmutz J, Kaeppler SM, Casler MD, Buell CR. Diversity and Population Structure of Northern Switchgrass as Revealed Through Exome Capture Sequencing. The Plant Journal : For Cell and Molecular Biology. PMID 26426343 DOI: 10.1111/Tpj.13041  1
2015 Kim J, Buell CR. A revolution in plant metabolism: Genome-enabled pathway discovery. Plant Physiology. PMID 26224805 DOI: 10.1104/Pp.15.00976  1
2015 Zuluaga AP, Solé M, Lu H, Góngora-Castillo E, Vaillancourt B, Coll N, Buell CR, Valls M. Transcriptome responses to Ralstonia solanacearum infection in the roots of the wild potato Solanum commersonii. Bmc Genomics. 16: 246. PMID 25880642 DOI: 10.1186/s12864-015-1460-1  1
2015 Kellner F, Kim J, Clavijo BJ, Hamilton JP, Childs KL, Vaillancourt B, Cepela J, Habermann M, Steuernagel B, Clissold L, McLay K, Buell CR, O'Connor SE. Genome-guided investigation of plant natural product biosynthesis. The Plant Journal : For Cell and Molecular Biology. 82: 680-92. PMID 25759247 DOI: 10.1111/Tpj.12827  1
2015 Hardigan MA, Bamberg J, Buell CR, Douches DS. Taxonomy and genetic differentiation among wild and cultivated germplasm of solanum sect. Petota Plant Genome. 8. DOI: 10.3835/plantgenome2014.06.0025  1
2014 Salvo SA, Hirsch CN, Buell CR, Kaeppler SM, Kaeppler HF. Whole transcriptome profiling of maize during early somatic embryogenesis reveals altered expression of stress factors and embryogenesis-related genes. Plos One. 9: e111407. PMID 25356773 DOI: 10.1371/journal.pone.0111407  1
2014 Campbell M, Suttle J, Douches DS, Buell CR. Treatment of potato tubers with the synthetic cytokinin 1-(α-ethylbenzyl)-3-nitroguanidine results in rapid termination of endodormancy and induction of transcripts associated with cell proliferation and growth. Functional & Integrative Genomics. 14: 789-99. PMID 25270889 DOI: 10.1007/s10142-014-0404-1  1
2014 Owens BF, Lipka AE, Magallanes-Lundback M, Tiede T, Diepenbrock CH, Kandianis CB, Kim E, Cepela J, Mateos-Hernandez M, Buell CR, Buckler ES, DellaPenna D, Gore MA, Rocheford T. A foundation for provitamin A biofortification of maize: genome-wide association and genomic prediction models of carotenoid levels. Genetics. 198: 1699-716. PMID 25258377 DOI: 10.1534/genetics.114.169979  0.4
2014 Hamilton JP, Buell CR. Timber! Felling the loblolly pine genome. Genome Biology. 15: 111. PMID 25000971 DOI: 10.1186/Gb4170  1
2014 Evans J, Kim J, Childs KL, Vaillancourt B, Crisovan E, Nandety A, Gerhardt DJ, Richmond TA, Jeddeloh JA, Kaeppler SM, Casler MD, Buell CR. Nucleotide polymorphism and copy number variant detection using exome capture and next-generation sequencing in the polyploid grass Panicum virgatum. The Plant Journal : For Cell and Molecular Biology. 79: 993-1008. PMID 24947485 DOI: 10.1111/Tpj.12601  1
2014 Zhang H, Koblížková A, Wang K, Gong Z, Oliveira L, Torres GA, Wu Y, Zhang W, Novák P, Buell CR, Macas J, Jiang J. Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres. The Plant Cell. 26: 1436-1447. PMID 24728646 DOI: 10.1105/tpc.114.123877  1
2014 Hirsch CD, Evans J, Buell CR, Hirsch CN. Reduced representation approaches to interrogate genome diversity in large repetitive plant genomes. Briefings in Functional Genomics. 13: 257-67. PMID 24395692 DOI: 10.1093/bfgp/elt051  1
2014 Hirsch CD, Hamilton JP, Childs KL, Cepela J, Crisovan E, Vaillancourt B, Hirsch CN, Habermann M, Neal B, Buell CR. Spud DB: A resource for mining sequences, genotypes, and phenotypes to accelerate potato breeding Plant Genome. 7. DOI: 10.3835/plantgenome2013.12.0042  1
2014 Sekhon RS, Briskine R, Hirsch CN, Myers CL, Springer NM, Buell CR, De Leon N, Kaeppler SM. Correction: Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays (PLoS ONE) Plos One. 9. DOI: 10.1371/annotation/0444d495-9231-4097-abe0-4750b9045971  1
2014 Douches D, Hirsch CN, Manrique-Carpintero NC, Massa AN, Coombs J, Hardigan M, Bisognin D, De Jong W, Buell CR. The Contribution of the Solanaceae Coordinated Agricultural Project to Potato Breeding Potato Research. 57: 215-224. DOI: 10.1007/S11540-014-9267-Z  1
2013 Gonzalez-Jorge S, Ha SH, Magallanes-Lundback M, Gilliland LU, Zhou A, Lipka AE, Nguyen YN, Angelovici R, Lin H, Cepela J, Little H, Buell CR, Gore MA, Dellapenna D. Carotenoid cleavage dioxygenase4 is a negative regulator of β-carotene content in Arabidopsis seeds. The Plant Cell. 25: 4812-26. PMID 24368792 DOI: 10.1105/Tpc.113.119677  1
2013 Kawahara Y, de la Bastide M, Hamilton JP, Kanamori H, McCombie WR, Ouyang S, Schwartz DC, Tanaka T, Wu J, Zhou S, Childs KL, Davidson RM, Lin H, Quesada-Ocampo L, Vaillancourt B, ... ... Buell CR, et al. Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data. Rice (New York, N.Y.). 6: 4. PMID 24280374 DOI: 10.1186/1939-8433-6-4  1
2013 Adhikari BN, Hamilton JP, Zerillo MM, Tisserat N, Lévesque CA, Buell CR. Comparative genomics reveals insight into virulence strategies of plant pathogenic oomycetes. Plos One. 8: e75072. PMID 24124466 DOI: 10.1371/journal.pone.0075072  1
2013 Zerillo MM, Adhikari BN, Hamilton JP, Buell CR, Lévesque CA, Tisserat N. Carbohydrate-active enzymes in pythium and their role in plant cell wall and storage polysaccharide degradation. Plos One. 8: e72572. PMID 24069150 DOI: 10.1371/journal.pone.0072572  1
2013 Lipka AE, Gore MA, Magallanes-Lundback M, Mesberg A, Lin H, Tiede T, Chen C, Buell CR, Buckler ES, Rocheford T, DellaPenna D. Genome-wide association study and pathway-level analysis of tocochromanol levels in maize grain. G3 (Bethesda, Md.). 3: 1287-99. PMID 23733887 DOI: 10.1534/G3.113.006148  0.84
2013 Sekhon RS, Briskine R, Hirsch CN, Myers CL, Springer NM, Buell CR, de Leon N, Kaeppler SM. Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays. Plos One. 8: e61005. PMID 23637782 DOI: 10.1371/Journal.Pone.0061005  1
2013 Hirsch CN, Hirsch CD, Felcher K, Coombs J, Zarka D, Van Deynze A, De Jong W, Veilleux RE, Jansky S, Bethke P, Douches DS, Buell CR. Retrospective view of North American potato (Solanum tuberosum L.) breeding in the 20th and 21st centuries. G3 (Bethesda, Md.). 3: 1003-13. PMID 23589519 DOI: 10.1534/g3.113.005595  1
2013 Iovene M, Zhang T, Lou Q, Buell CR, Jiang J. Copy number variation in potato - an asexually propagated autotetraploid species. The Plant Journal : For Cell and Molecular Biology. 75: 80-9. PMID 23573982 DOI: 10.1111/tpj.12200  1
2013 Yamazaki M, Mochida K, Asano T, Nakabayashi R, Chiba M, Udomson N, Yamazaki Y, Goodenowe DB, Sankawa U, Yoshida T, Toyoda A, Totoki Y, Sakaki Y, Góngora-Castillo E, Buell CR, et al. Coupling deep transcriptome analysis with untargeted metabolic profiling in Ophiorrhiza pumila to further the understanding of the biosynthesis of the anti-cancer alkaloid camptothecin and anthraquinones. Plant & Cell Physiology. 54: 686-96. PMID 23503598 DOI: 10.1093/pcp/pct040  1
2013 Góngora-Castillo E, Buell CR. Bioinformatics challenges in de novo transcriptome assembly using short read sequences in the absence of a reference genome sequence. Natural Product Reports. 30: 490-500. PMID 23377493 DOI: 10.1039/c3np20099j  1
2013 Yeo YS, Nybo SE, Chittiboyina AG, Weerasooriya AD, Wang YH, Góngora-Castillo E, Vaillancourt B, Buell CR, DellaPenna D, Celiz MD, Jones AD, Wurtele ES, Ransom N, Dudareva N, Shaaban KA, et al. Functional identification of valerena-1,10-diene synthase, a terpene synthase catalyzing a unique chemical cascade in the biosynthesis of biologically active sesquiterpenes in Valeriana officinalis. The Journal of Biological Chemistry. 288: 3163-73. PMID 23243312 DOI: 10.1074/Jbc.M112.415836  1
2012 Góngora-Castillo E, Childs KL, Fedewa G, Hamilton JP, Liscombe DK, Magallanes-Lundback M, Mandadi KK, Nims E, Runguphan W, Vaillancourt B, Varbanova-Herde M, Dellapenna D, McKnight TD, O'Connor S, Buell CR. Development of transcriptomic resources for interrogating the biosynthesis of monoterpene indole alkaloids in medicinal plant species. Plos One. 7: e52506. PMID 23300689 DOI: 10.1371/Journal.Pone.0052506  1
2012 Góngora-Castillo E, Fedewa G, Yeo Y, Chappell J, DellaPenna D, Buell CR. Genomic approaches for interrogating the biochemistry of medicinal plant species. Methods in Enzymology. 517: 139-59. PMID 23084937 DOI: 10.1016/B978-0-12-404634-4.00007-3  1
2012 Gong Z, Wu Y, Koblízková A, Torres GA, Wang K, Iovene M, Neumann P, Zhang W, Novák P, Buell CR, Macas J, Jiang J. Repeatless and repeat-based centromeres in potato: implications for centromere evolution. The Plant Cell. 24: 3559-74. PMID 22968715 DOI: 10.1105/tpc.112.100511  0.52
2012 Sim SC, Durstewitz G, Plieske J, Wieseke R, Ganal MW, Van Deynze A, Hamilton JP, Buell CR, Causse M, Wijeratne S, Francis DM. Development of a large SNP genotyping array and generation of high-density genetic maps in tomato. Plos One. 7: e40563. PMID 22802968 DOI: 10.1371/journal.pone.0040563  1
2012 Felcher KJ, Coombs JJ, Massa AN, Hansey CN, Hamilton JP, Veilleux RE, Buell CR, Douches DS. Integration of two diploid potato linkage maps with the potato genome sequence Plos One. 7. PMID 22558443 DOI: 10.1371/journal.pone.0036347  1
2012 Savory EA, Adhikari BN, Hamilton JP, Vaillancourt B, Buell CR, Day B. MRNA-seq analysis of the Pseudoperonospora cubensis transcriptome during cucumber (Cucumis sativus L.) infection Plos One. 7. PMID 22545137 DOI: 10.1371/Journal.Pone.0035796  1
2012 Adhikari BN, Savory EA, Vaillancourt B, Childs KL, Hamilton JP, Day B, Buell CR. Expression profiling of cucumis sativus in response to infection by pseudoperonospora cubensis Plos One. 7. PMID 22545095 DOI: 10.1371/Journal.Pone.0034954  1
2012 Savory EA, Zou C, Adhikari BN, Hamilton JP, Buell CR, Shiu SH, Day B. Alternative splicing of a multi-drug transporter from pseudoperonospora cubensis generates an rxlr effector protein that elicits a rapid cell death Plos One. 7. PMID 22496844 DOI: 10.1371/Journal.Pone.0034701  1
2012 Hansey CN, Vaillancourt B, Sekhon RS, de Leon N, Kaeppler SM, Buell CR. Maize (Zea mays L.) genome diversity as revealed by RNA-sequencing. Plos One. 7: e33071. PMID 22438891 DOI: 10.1371/journal.pone.0033071  1
2012 Childs KL, Konganti K, Buell CR. The Biofuel Feedstock Genomics Resource: a web-based portal and database to enable functional genomics of plant biofuel feedstock species. Database : the Journal of Biological Databases and Curation. 2012: bar061. PMID 22250003 DOI: 10.1093/database/bar061  1
2012 Hamilton JP, Sim SC, Stoffel K, Van Deynze A, Buell CR, Francis DM. Single nucleotide polymorphism discovery in cultivated tomato via sequencing by synthesis Plant Genome. 5: 17-29. DOI: 10.3835/plantgenome2011.12.0033  1
2012 Shen QJ, Yu D, Jeon JS, Piffanelli P, Abbruscato P, Guo ZJ, Zhang Y, Itoh T, Lee SS, Buell CR, Nagato Y, McCouch S, Yano M, Wang Gl, Jena KK, et al. Nomenclature report on rice WRKY's - conflict regarding gene names and its solution Rice. 5: 1-3. DOI: 10.1186/1939-8433-5-3  1
2011 Torres GA, Gong Z, Iovene M, Hirsch CD, Buell CR, Bryan GJ, Novák P, Macas J, Jiang J. Organization and evolution of subtelomeric satellite repeats in the potato genome. G3 (Bethesda, Md.). 1: 85-92. PMID 22384321 DOI: 10.1534/g3.111.000125  0.52
2011 Hamilton JP, Neeno-Eckwall EC, Adhikari BN, Perna NT, Tisserat N, Leach JE, Lévesque CA, Buell CR. The Comprehensive Phytopathogen Genomics Resource: A web-based resource for data-mining plant pathogen genomes Database. 2011. PMID 22120664 DOI: 10.1093/database/bar053  1
2011 Massa AN, Childs KL, Lin H, Bryan GJ, Giuliano G, Buell CR. The transcriptome of the reference potato genome Solanum tuberosum Group Phureja clone DM1-3 516R44. Plos One. 6: e26801. PMID 22046362 DOI: 10.1371/Journal.Pone.0026801  1
2011 Childs KL, Davidson RM, Buell CR. Gene coexpression network analysis as a source of functional annotation for rice genes. Plos One. 6: e22196. PMID 21799793 DOI: 10.1371/journal.pone.0022196  1
2011 Xu X, Pan S, Cheng S, Zhang B, Mu D, Ni P, Zhang G, Yang S, Li R, Wang J, Orjeda G, Guzman F, Torres M, Lozano R, ... ... Buell CR, et al. Genome sequence and analysis of the tuber crop potato. Nature. 475: 189-95. PMID 21743474 DOI: 10.1038/Nature10158  1
2011 Hamilton JP, Hansey CN, Whitty BR, Stoffel K, Massa AN, Van Deynze A, De Jong WS, Douches DS, Buell CR. Single nucleotide polymorphism discovery in elite north American potato germplasm Bmc Genomics. 12. PMID 21658273 DOI: 10.1186/1471-2164-12-302  1
2011 Iovene M, Cavagnaro PF, Senalik D, Buell CR, Jiang J, Simon PW. Comparative FISH mapping of Daucus species (Apiaceae family). Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 19: 493-506. PMID 21547583 DOI: 10.1007/s10577-011-9202-y  1
2011 Triplett LR, Hamilton JP, Buell CR, Tisserat NA, Verdier V, Zink F, Leach JE. Genomic analysis of Xanthomonas oryzae isolates from rice grown in the United States reveals substantial divergence from known X. oryzae pathovars. Applied and Environmental Microbiology. 77: 3930-7. PMID 21515727 DOI: 10.1128/Aem.00028-11  1
2011 Giddings LA, Liscombe DK, Hamilton JP, Childs KL, DellaPenna D, Buell CR, O'Connor SE. A stereoselective hydroxylation step of alkaloid biosynthesis by a unique cytochrome P450 in Catharanthus roseus Journal of Biological Chemistry. 286: 16751-16757. PMID 21454651 DOI: 10.1074/Jbc.M111.225383  1
2010 Bhaskar PB, Wu L, Busse JS, Whitty BR, Hamernik AJ, Jansky SH, Buell CR, Bethke PC, Jiang J. Suppression of the vacuolar invertase gene prevents cold-induced sweetening in potato. Plant Physiology. 154: 939-48. PMID 20736383 DOI: 10.1104/pp.110.162545  1
2010 Lévesque CA, Brouwer H, Cano L, Hamilton JP, Holt C, Huitema E, Raffaele S, Robideau GP, Thines M, Win J, Zerillo MM, Beakes GW, Boore JL, Busam D, Dumas B, ... ... Buell CR, et al. Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire. Genome Biology. 11: R73. PMID 20626842 DOI: 10.1186/Gb-2010-11-7-R73  1
2010 Lou Q, Iovene M, Spooner DM, Buell CR, Jiang J. Evolution of chromosome 6 of Solanum species revealed by comparative fluorescence in situ hybridization mapping. Chromosoma. 119: 435-42. PMID 20352244 DOI: 10.1007/s00412-010-0269-6  1
2010 Lin H, Moghe G, Ouyang S, Iezzoni A, Shiu SH, Gu X, Buell CR. Comparative analyses reveal distinct sets of lineage-specific genes within Arabidopsis thaliana. Bmc Evolutionary Biology. 10: 41. PMID 20152032 DOI: 10.1186/1471-2148-10-41  1
2010 Lang JM, Hamilton JP, Diaz MGQ, Van Sluys MA, Burgos MRG, Vera Cruz CM, Buell CR, Tisserat NA, Leach JE. Genomics-based diagnostic marker development for Xanthomonas oryzae pv. oryzae and X. oryzae pv. oryzicola Plant Disease. 94: 311-319. DOI: 10.1094/PDIS-94-3-0311  1
2009 Zou C, Lehti-Shiu MD, Thibaud-Nissen F, Prakash T, Buell CR, Shiu SH. Evolutionary and expression signatures of pseudogenes in Arabidopsis and rice. Plant Physiology. 151: 3-15. PMID 19641029 DOI: 10.1104/pp.109.140632  1
2009 Thibaud-Nissen F, Ouyang S, Buell CR. Identification and characterization of pseudogenes in the rice gene complement. Bmc Genomics. 10: 317. PMID 19607679 DOI: 10.1186/1471-2164-10-317  1
2009 McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, ... ... Buell CR, et al. Genomewide SNP variation reveals relationships among landraces and modern varieties of rice. Proceedings of the National Academy of Sciences of the United States of America. 106: 12273-8. PMID 19597147 DOI: 10.1073/Pnas.0900992106  1
2009 Ouyang S, Thibaud-Nissen F, Childs KL, Zhu W, Buell CR. Plant genome annotation methods. Methods in Molecular Biology (Clifton, N.J.). 513: 263-82. PMID 19347655 DOI: 10.1007/978-1-59745-427-8_14  1
2009 Gray J, Bevan M, Brutnell T, Buell CR, Cone K, Hake S, Jackson D, Kellogg E, Lawrence C, McCouch S, Mockler T, Moose S, Paterson A, Peterson T, Rokshar D, et al. A recommendation for naming transcription factor proteins in the grasses. Plant Physiology. 149: 4-6. PMID 19126689 DOI: 10.1104/Pp.108.128504  1
2009 Kellogg EA, Buell CR. Splendor in the grasses. Plant Physiology. 149: 1-3. PMID 19126688 DOI: 10.1104/pp.104.900281  1
2009 Kuang H, Padmanabhan C, Li F, Kamei A, Bhaskar PB, Ouyang S, Jiang J, Buell CR, Baker B. Identification of miniature inverted-repeat transposable elements (MITEs) and biogenesis of their siRNAs in the Solanaceae: new functional implications for MITEs. Genome Research. 19: 42-56. PMID 19037014 DOI: 10.1101/gr.078196.108  0.52
2009 Buell CR. Poaceae genomes: going from unattainable to becoming a model clade for comparative plant genomics. Plant Physiology. 149: 111-6. PMID 19005087 DOI: 10.1104/pp.108.128926  1
2008 Cheung F, Win J, Lang JM, Hamilton J, Vuong H, Leach JE, Kamoun S, André Lévesque C, Tisserat N, Buell CR. Analysis of the Pythium ultimum transcriptome using Sanger and Pyrosequencing approaches. Bmc Genomics. 9: 542. PMID 19014603 DOI: 10.1186/1471-2164-9-542  1
2008 Jung KH, Dardick C, Bartley LE, Cao P, Phetsom J, Canlas P, Seo YS, Shultz M, Ouyang S, Yuan Q, Frank BC, Ly E, Zheng L, Jia Y, Hsia AP, ... ... Buell CR, et al. Refinement of light-responsive transcript lists using rice oligonucleotide arrays: evaluation of gene-redundancy. Plos One. 3: e3337. PMID 18836531 DOI: 10.1371/Journal.Pone.0003337  1
2008 Iovene M, Wielgus SM, Simon PW, Buell CR, Jiang J. Chromatin structure and physical mapping of chromosome 6 of potato and comparative analyses with tomato. Genetics. 180: 1307-17. PMID 18791232 DOI: 10.1534/genetics.108.093179  1
2008 Zhu W, Ouyang S, Iovene M, O'Brien K, Vuong H, Jiang J, Buell CR. Analysis of 90 Mb of the potato genome reveals conservation of gene structures and order with tomato but divergence in repetitive sequence composition. Bmc Genomics. 9: 286. PMID 18554403 DOI: 10.1186/1471-2164-9-286  1
2008 Lin H, Ouyang S, Egan A, Nobuta K, Haas BJ, Zhu W, Gu X, Silva JC, Meyers BC, Buell CR. Characterization of paralogous protein families in rice. Bmc Plant Biology. 8: 18. PMID 18284697 DOI: 10.1186/1471-2229-8-18  1
2008 Thibaud-Nissen F, Wortman J, Buell CR, Zhu W. Structural, Functional, and Comparative Annotation of Plant Genomes The Handbook of Plant Functional Genomics: Concepts and Protocols. 373-395. DOI: 10.1002/9783527622542.ch18  1
2007 Chan AP, Rabinowicz PD, Quackenbush J, Buell CR, Town CD. Plant database resources at The Institute for Genomic Research. Methods in Molecular Biology (Clifton, N.J.). 406: 113-36. PMID 18287690 DOI: 10.1007/978-1-59745-535-0_5  1
2007 Thibaud-Nissen F, Campbell M, Hamilton JP, Zhu W, Buell CR. EuCAP, a Eukaryotic Community Annotation Package, and its application to the rice genome. Bmc Genomics. 8: 388. PMID 17961238 DOI: 10.1186/1471-2164-8-388  1
2007 Campbell MA, Zhu W, Jiang N, Lin H, Ouyang S, Childs KL, Haas BJ, Hamilton JP, Buell CR. Identification and characterization of lineage-specific genes within the poaceae Plant Physiology. 145: 1311-1322. PMID 17951464 DOI: 10.1104/Pp.107.104513  1
2007 Stupar RM, Bhaskar PB, Yandell BS, Rensink WA, Hart AL, Ouyang S, Veilleux RE, Busse JS, Erhardt RJ, Buell CR, Jiang J. Phenotypic and transcriptomic changes associated with potato autopolyploidization. Genetics. 176: 2055-67. PMID 17565939 DOI: 10.1534/Genetics.107.074286  1
2007 Zhu W, Buell CR. Improvement of whole-genome annotation of cereals through comparative analyses. Genome Research. 17: 299-310. PMID 17284677 DOI: 10.1101/gr.5881807  1
2007 Ouyang S, Zhu W, Hamilton J, Lin H, Campbell M, Childs K, Thibaud-Nissen F, Malek RL, Lee Y, Zheng L, Orvis J, Haas B, Wortman J, Buell CR. The TIGR Rice Genome Annotation Resource: improvements and new features. Nucleic Acids Research. 35: D883-7. PMID 17145706 DOI: 10.1093/Nar/Gkl976  0.32
2007 Childs KL, Hamilton JP, Zhu W, Ly E, Cheung F, Wu H, Rabinowicz PD, Town CD, Buell CR, Chan AP. The TIGR Plant Transcript Assemblies database. Nucleic Acids Research. 35: D846-51. PMID 17088284 DOI: 10.1093/nar/gkl785  1
2007 Antonio BA, Buell CR, Yamazaki Y, Yap I, Perin C, Bruskiewich R. Informatics resources for rice functional genomics Rice Functional Genomics: Challenges, Progress and Prospects. 355-394. DOI: 10.1007/0-387-48914-2_14  1
2006 Vencato M, Tian F, Alfano JR, Buell CR, Cartinhour S, DeClerck GA, Guttman DS, Stavrinides J, Joardar V, Lindeberg M, Bronstein PA, Mansfield JW, Myers CR, Collmer A, Schneider DJ. Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A. Molecular Plant-Microbe Interactions : Mpmi. 19: 1193-206. PMID 17073302 DOI: 10.1094/Mpmi-19-1193  1
2006 Cairney J, Zheng L, Cowels A, Hsiao J, Zismann V, Liu J, Ouyang S, Thibaud-Nissen F, Hamilton J, Childs K, Pullman GS, Zhang Y, Oh T, Buell CR. Expressed sequence tags from loblolly pine embryos reveal similarities with angiosperm embryogenesis. Plant Molecular Biology. 62: 485-501. PMID 17001497 DOI: 10.1007/s11103-006-9035-9  1
2006 Yan H, Ito H, Nobuta K, Ouyang S, Jin W, Tian S, Lu C, Venu RC, Wang GL, Green PJ, Wing RA, Buell CR, Meyers BC, Jiang J. Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere. The Plant Cell. 18: 2123-33. PMID 16877494 DOI: 10.1105/Tpc.106.043794  1
2006 Lin H, Zhu W, Silva JC, Gu X, Buell CR. Intron gain and loss in segmentally duplicated genes in rice. Genome Biology. 7: R41. PMID 16719932 DOI: 10.1186/Gb-2006-7-5-R41  1
2006 McNally KL, Bruskiewich R, Mackill D, Buell CR, Leach JE, Leung H. Sequencing multiple and diverse rice varieties. Connecting whole-genome variation with phenotypes. Plant Physiology. 141: 26-31. PMID 16684934 DOI: 10.1104/pp.106.077313  1
2006 Avila-Adame C, Gómez-Alpizar L, Zismann V, Jones KM, Buell CR, Ristaino JB. Mitochondrial genome sequences and molecular evolution of the Irish potato famine pathogen, Phytophthora infestans. Current Genetics. 49: 39-46. PMID 16328503 DOI: 10.1007/S00294-005-0016-3  1
2005 Rensink WA, Buell CR. Microarray expression profiling resources for plant genomics. Trends in Plant Science. 10: 603-9. PMID 16275051 DOI: 10.1016/j.tplants.2005.10.003  1
2005 Yan H, Jin W, Nagaki K, Tian S, Ouyang S, Buell CR, Talbert PB, Henikoff S, Jiang J. Transcription and histone modifications in the recombination-free region spanning a rice centromere. The Plant Cell. 17: 3227-38. PMID 16272428 DOI: 10.1105/tpc.105.037945  1
2005 Kresovich S, Barbazuk B, Bedell JA, Borrell A, Buell CR, Burke J, Clifton S, Cordonnier-Pratt MM, Cox S, Dahlberg J, Erpelding J, Fulton TM, Fulton B, Fulton L, Gingle AR, et al. Toward sequencing the sorghum genome. A U.S. National Science Foundation-sponsored workshop report Plant Physiology. 138: 1898-1902. PMID 16172096 DOI: 10.1104/Pp.105.065136  1
2005 Restrepo S, Myers KL, del Pozo O, Martin GB, Hart AL, Buell CR, Fry WE, Smart CD. Gene profiling of a compatible interaction between Phytophthora infestans and Solanum tuberosum suggests a role for carbonic anhydrase. Molecular Plant-Microbe Interactions : Mpmi. 18: 913-22. PMID 16167762 DOI: 10.1094/MPMI-18-0913  1
2005 Rensink WA, Lee Y, Liu J, Iobst S, Ouyang S, Buell CR. Comparative analyses of six solanaceous transcriptomes reveal a high degree of sequence conservation and species-specific transcripts. Bmc Genomics. 6: 124. PMID 16162286 DOI: 10.1186/1471-2164-6-124  1
2005 Joardar V, Lindeberg M, Jackson RW, Selengut J, Dodson R, Brinkac LM, Daugherty SC, Deboy R, Durkin AS, Giglio MG, Madupu R, Nelson WC, Rosovitz MJ, Sullivan S, Crabtree J, ... ... Buell CR, et al. Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of Bacteriology. 187: 6488-98. PMID 16159782 DOI: 10.1128/Jb.187.18.6488-6498.2005  1
2005 Buell CR, Yuan Q, Ouyang S, Liu J, Zhu W, Wang A, Maiti R, Haas B, Wortman J, Pertea M, Jones KM, Kim M, Overton L, Tsitrin T, Fadrosh D, et al. Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species. Genome Research. 15: 1284-91. PMID 16109971 DOI: 10.1101/Gr.3869505  1
2005 Rensink W, Hart A, Liu J, Ouyang S, Zismann V, Buell CR. Analyzing the potato abiotic stress transcriptome using expressed sequence tags. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 48: 598-605. PMID 16094426 DOI: 10.1139/g05-034  1
2005 Yuan Q, Ouyang S, Wang A, Zhu W, Maiti R, Lin H, Hamilton J, Haas B, Sultana R, Cheung F, Wortman J, Buell CR. The institute for genomic research Osa1 rice genome annotation database. Plant Physiology. 138: 18-26. PMID 15888674 DOI: 10.1104/Pp.104.059063  1
2005 Rensink WA, Iobst S, Hart A, Stegalkina S, Liu J, Buell CR. Gene expression profiling of potato responses to cold, heat, and salt stress. Functional & Integrative Genomics. 5: 201-7. PMID 15856349 DOI: 10.1007/s10142-005-0141-6  1
2005 Nagaki K, Neumann P, Zhang D, Ouyang S, Buell CR, Cheng Z, Jiang J. Structure, divergence, and distribution of the CRR centromeric retrotransposon family in rice. Molecular Biology and Evolution. 22: 845-55. PMID 15616142 DOI: 10.1093/molbev/msi069  1
2005 Choisne N, Demange N, Orjeda G, Samain S, D'Hont A, Cattolico L, Pelletier E, Couloux A, Segurens B, Wincker P, Scarpelli C, Weissenbach J, Salanoubat M, Singh NK, Mohapatra T, ... ... Buell CR, et al. The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications Bmc Biology. 3. DOI: 10.1186/1741-7007-3-20  1
2005 Gardiner JM, Buell CR, Elumalai R, Galbraith DW, Henderson DA, Iniguez AL, Kaeppler SM, Kim JJ, Liu J, Smith A, Zheng L, Chandler VL. Design, production, and utilization of long oligonucleotide microarrays for expression analysis in maize Maydica. 50: 425-435.  1
2004 Gill BS, Appels R, Botha-Oberholster AM, Buell CR, Bennetzen JL, Chalhoub B, Chumley F, Dvorák J, Iwanaga M, Keller B, Li W, McCombie WR, Ogihara Y, Quetier F, Sasaki T. A workshop report on wheat genome sequencing: International Genome Research on Wheat Consortium. Genetics. 168: 1087-96. PMID 15514080 DOI: 10.1534/Genetics.104.034769  1
2004 Rensink WA, Buell CR. Arabidopsis to rice. Applying knowledge from a weed to enhance our understanding of a crop species. Plant Physiology. 135: 622-9. PMID 15208410 DOI: 10.1104/pp.104.040170  1
2004 Nagaki K, Cheng Z, Ouyang S, Talbert PB, Kim M, Jones KM, Henikoff S, Buell CR, Jiang J. Sequencing of a rice centromere uncovers active genes. Nature Genetics. 36: 138-45. PMID 14716315 DOI: 10.1038/ng1289  1
2004 Ouyang S, Buell CR. The TIGR Plant Repeat Databases: a collective resource for the identification of repetitive sequences in plants. Nucleic Acids Research. 32: D360-3. PMID 14681434 DOI: 10.1093/nar/gkh099  1
2003 Buell CR, Joardar V, Lindeberg M, Selengut J, Paulsen IT, Gwinn ML, Dodson RJ, Deboy RT, Durkin AS, Kolonay JF, Madupu R, Daugherty S, Brinkac L, Beanan MJ, Haft DH, et al. The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proceedings of the National Academy of Sciences of the United States of America. 100: 10181-6. PMID 12928499 DOI: 10.1073/Pnas.1731982100  1
2003 Luo MC, Thomas C, You FM, Hsiao J, Ouyang S, Buell CR, Malandro M, McGuire PE, Anderson OD, Dvorak J. High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis. Genomics. 82: 378-89. PMID 12906862 DOI: 10.1016/S0888-7543(03)00128-9  1
2003 Song J, Bradeen JM, Naess SK, Raasch JA, Wielgus SM, Haberlach GT, Liu J, Kuang H, Austin-Phillips S, Buell CR, Helgeson JP, Jiang J. Gene RB cloned from Solanum bulbocastanum confers broad spectrum resistance to potato late blight. Proceedings of the National Academy of Sciences of the United States of America. 100: 9128-33. PMID 12872003 DOI: 10.1073/pnas.1533501100  1
2003 Buell CR, Sundaresan V. A workshop on establishing a rice resource center in the United States. Plant Physiology. 132: 1137. PMID 12857795 DOI: 10.1104/pp.024984  1
2003 Bradeen JM, Naess SK, Song J, Haberlach GT, Wielgus SM, Buell CR, Jiang J, Helgeson JP. Concomitant reiterative BAC walking and fine genetic mapping enable physical map development for the broad-spectrum late blight resistance region, RB. Molecular Genetics and Genomics : Mgg. 269: 603-11. PMID 12827499 DOI: 10.1007/s00438-003-0865-8  1
2003 Nagaki K, Song J, Stupar RM, Parokonny AS, Yuan Q, Ouyang S, Liu J, Hsiao J, Jones KM, Dawe RK, Buell CR, Jiang J. Molecular and cytological analyses of large tracks of centromeric DNA reveal the structure and evolutionary dynamics of maize centromeres. Genetics. 163: 759-70. PMID 12618412  0.52
2003 Ronning CM, Stegalkina SS, Ascenzi RA, Bougri O, Hart AL, Utterbach TR, Vanaken SE, Riedmuller SB, White JA, Cho J, Pertea GM, Lee Y, Karamycheva S, Sultana R, Tsai J, ... ... Buell CR, et al. Comparative analyses of potato expressed sequence tag libraries. Plant Physiology. 131: 419-29. PMID 12586867 DOI: 10.1104/pp.013581  1
2003 Yuan Q, Ouyang S, Liu J, Suh B, Cheung F, Sultana R, Lee D, Quackenbush J, Buell CR. The TIGR rice genome annotation resource: annotating the rice genome and creating resources for plant biologists. Nucleic Acids Research. 31: 229-33. PMID 12519988 DOI: 10.1093/nar/gkg059  1
2002 Buell CR. Current status of the sequence of the rice genome and prospects for finishing the first monocot genome Plant Physiology. 130: 1585-1586. PMID 12481040 DOI: 10.1104/pp.014878  1
2002 Buell CR. Obtaining the sequence of the rice genome and lessons learned along the way Trends in Plant Science. 7: 538-542. PMID 12475494 DOI: 10.1016/S1360-1385(02)02369-5  1
2002 Cheng Z, Buell CR, Wing RA, Jiang J. Resolution of fluorescence in-situ hybridization mapping on rice mitotic prometaphase chromosomes, meiotic pachytene chromosomes and extended DNA fibers Chromosome Research. 10: 379-387. PMID 12296520 DOI: 10.1023/A:1016849618707  1
2002 Cheng Z, Dong F, Langdon T, Ouyang S, Buell CR, Gu M, Blattner FR, Jiang J. Functional rice centromeres are marked by a satellite repeat and a centromere-specific retrotransposon. The Plant Cell. 14: 1691-704. PMID 12172016 DOI: 10.1105/Tpc.003079  1
2002 Fouts DE, Abramovitch RB, Alfano JR, Baldo AM, Buell CR, Cartinhour S, Chatterjee AK, D'Ascenzo M, Gwinn ML, Lazarowitz SG, Lin NC, Martin GB, Rehm AH, Schneider DJ, van Dijk K, et al. Genomewide identification of Pseudomonas syringae pv. tomato DC3000 promoters controlled by the HrpL alternative sigma factor. Proceedings of the National Academy of Sciences of the United States of America. 99: 2275-80. PMID 11854524 DOI: 10.1073/Pnas.032514099  1
2001 Cheng Z, Buell CR, Wing RA, Gu M, Jiang J. Toward a cytological characterization of the rice genome Genome Research. 11: 2133-2141. PMID 11731505 DOI: 10.1101/gr.194601  1
2001 Stupar RM, Lilly JW, Town CD, Cheng Z, Kaul S, Buell CR, Jiang J. Complex mtDNA constitutes an approximate 620-kb insertion on Arabidopsis thaliana chromosome 2: Implication of potential sequencing errors caused by large-unit repeats Proceedings of the National Academy of Sciences of the United States of America. 98: 5099-5103. PMID 11309509 DOI: 10.1073/pnas.091110398  1
2001 Cheng Z, Presting GG, Buell CR, Wing RA, Jiang J. High-resolution pachytene chromosome mapping of bacterial artificial chromosomes anchored by genetic markers reveals the centromere location and the distribution of genetic recombination along chromosome 10 of rice. Genetics. 157: 1749-57. PMID 11290728  1
2001 Yuan Q, Quackenbush J, Sultana R, Pertea M, Salzberg SL, Buell CR. Rice bioinformatics. Analysis of rice sequence data and leveraging the data to other plant species Plant Physiology. 125: 1166-1174. PMID 11244096 DOI: 10.1104/pp.125.3.1166  1
1999 Lin X, Kaul S, Rounsley S, Shea TP, Benito MI, Town CD, Fujii CY, Mason T, Bowman CL, Barnstead M, Feldblyum TV, Buell CR, Ketchum KA, Lee J, Ronning CM, et al. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Nature. 402: 761-8. PMID 10617197 DOI: 10.1038/45471  0.4
1998 Buell CR. Arabidopsis: A weed leading the field of plant-pathogen interactions Plant Physiology and Biochemistry. 36: 177-186. DOI: 10.1016/S0981-9428(98)80102-2  1
1997 Buell CR, Somerville SC. Use of Arabidopsis recombinant inbred lines reveals a monogenic and a novel digenic resistance mechanism to Xanthomonas campestris pv campestris Plant Journal. 12: 21-29. PMID 9263449  1
1995 Buell CR, Somerville SC. Expression of defense-related and putative signaling genes during tolerant and susceptible interactions of Arabidopsis with Xanthomonas campestris pv. campestris Molecular Plant-Microbe Interactions. 8: 435-443.  1
1993 Buell CR, Anderson AJ. Expression of the aggA locus of Pseudomonas putida in vitro and in planta as detected by the reporter gene, xylE. Molecular Plant-Microbe Interactions : Mpmi. 6: 331-40. PMID 8324250  1
1993 Buell CR, Whetton R, Tari P, Anderson AJ. Characterization of cell surface properties in agglutinable and nonagglutinable mutants of Pseudomonas putida. Canadian Journal of Microbiology. 39: 787-94. PMID 8106135  1
1992 Buell CR, Anderson AJ. Genetic analysis of the aggA locus involved in agglutination and adherence of Pseudomonas putida, a beneficial fluorescent pseudomonad. Molecular Plant-Microbe Interactions : Mpmi. 5: 154-62. PMID 1617198  1
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