Xin Chen - Publications

Affiliations: 
Johns Hopkins University, Baltimore, MD 

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Vidaurre V, Song A, Li T, Ku WL, Zhao K, Qian J, Chen X. The histone methyl-transferase SET1 coordinates multiple signaling pathways in regulating male germline stem cell maintenance and differentiation. Biorxiv : the Preprint Server For Biology. PMID 38405894 DOI: 10.1101/2024.02.14.580277  0.375
2023 Zion EH, Ringwalt D, Rinaldi K, Kahney EW, Li Y, Chen X. Old and newly synthesized histones are asymmetrically distributed in Drosophila intestinal stem cell divisions. Embo Reports. e56404. PMID 37255015 DOI: 10.15252/embr.202256404  0.369
2023 Zion E, Chen X. Studying histone inheritance in different systems using imaging-based methods and perspectives. Biochemical Society Transactions. PMID 37171077 DOI: 10.1042/BST20220983  0.343
2023 Chandrasekhara C, Ranjan R, Urban JA, Davis BEM, Ku WL, Snedeker J, Zhao K, Chen X. A single N-terminal amino acid determines the distinct roles of histones H3 and H3.3 in the Drosophila male germline stem cell lineage. Plos Biology. 21: e3002098. PMID 37126497 DOI: 10.1371/journal.pbio.3002098  0.306
2022 Gleason RJ, Chen X. Epigenetic dynamics during germline development: insights from Drosophila and C. elegans. Current Opinion in Genetics & Development. 78: 102017. PMID 36549194 DOI: 10.1016/j.gde.2022.102017  0.317
2022 Urban JA, Ranjan R, Chen X. Asymmetric Histone Inheritance: Establishment, Recognition, and Execution. Annual Review of Genetics. PMID 35905975 DOI: 10.1146/annurev-genet-072920-125226  0.336
2022 Ranjan R, Snedeker J, Wooten M, Chu C, Bracero S, Mouton T, Chen X. Differential condensation of sister chromatids acts with Cdc6 to ensure asynchronous S-phase entry in Drosophila male germline stem cell lineage. Developmental Cell. PMID 35483360 DOI: 10.1016/j.devcel.2022.04.007  0.783
2022 Ranjan R, Chen X. Mitotic drive in asymmetric epigenetic inheritance. Biochemical Society Transactions. PMID 35437581 DOI: 10.1042/BST20200267  0.363
2021 Zion E, Chen X. Breaking Symmetry: The Asymmetries in Epigenetic Inheritance. The Biochemist. 43: 14-19. PMID 34354328 DOI: 10.1042/bio_2020_110  0.337
2021 Bohrer CH, Yang X, Thakur S, Weng X, Tenner B, McQuillen R, Ross B, Wooten M, Chen X, Zhang J, Roberts E, Lakadamyali M, Xiao J. A pairwise distance distribution correction (DDC) algorithm to eliminate blinking-caused artifacts in SMLM. Nature Methods. PMID 34059826 DOI: 10.1038/s41592-021-01154-y  0.687
2021 Kahney EW, Zion EH, Sohn L, Viets-Layng K, Johnston R, Chen X. Characterization of histone inheritance patterns in the Drosophila female germline. Embo Reports. e51530. PMID 34031963 DOI: 10.15252/embr.202051530  0.39
2021 Vidaurre V, Chen X. Epigenetic regulation of drosophila germline stem cell maintenance and differentiation. Developmental Biology. PMID 33610541 DOI: 10.1016/j.ydbio.2021.02.003  0.337
2020 Zion EH, Chandrasekhara C, Chen X. Asymmetric inheritance of epigenetic states in asymmetrically dividing stem cells. Current Opinion in Cell Biology. 67: 27-36. PMID 32871437 DOI: 10.1016/J.Ceb.2020.08.003  0.451
2020 Ma B, Trieu TJ, Cheng J, Zhou S, Tang Q, Xie J, Liu JL, Zhao K, Habib SJ, Chen X. Differential Histone Distribution Patterns in Induced Asymmetrically Dividing Mouse Embryonic Stem Cells. Cell Reports. 32: 108003. PMID 32783931 DOI: 10.1016/J.Celrep.2020.108003  0.457
2020 Shi Z, Lim C, Tran V, Cui K, Zhao K, Chen X. Single-cyst transcriptome analysis of male germline stem cell lineage. Development (Cambridge, England). PMID 32122991 DOI: 10.1242/Dev.184259  0.416
2020 Wooten M, Li Y, Snedeker J, Nizami ZF, Gall JG, Chen X. Superresolution imaging of chromatin fibers to visualize epigenetic information on replicative DNA. Nature Protocols. PMID 32051613 DOI: 10.1038/S41596-019-0283-Y  0.758
2019 Wooten M, Ranjan R, Chen X. Asymmetric Histone Inheritance in Asymmetrically Dividing Stem Cells. Trends in Genetics : Tig. PMID 31753528 DOI: 10.1016/J.Tig.2019.10.004  0.789
2019 Ranjan R, Snedeker J, Chen X. Asymmetric Centromeres Differentially Coordinate with Mitotic Machinery to Ensure Biased Sister Chromatid Segregation in Germline Stem Cells. Cell Stem Cell. PMID 31564548 DOI: 10.1016/J.Stem.2019.08.014  0.45
2019 Wooten M, Snedeker J, Nizami ZF, Yang X, Ranjan R, Urban E, Kim JM, Gall J, Xiao J, Chen X. Asymmetric histone inheritance via strand-specific incorporation and biased replication fork movement. Nature Structural & Molecular Biology. PMID 31358945 DOI: 10.1038/S41594-019-0269-Z  0.777
2019 Kahney EW, Snedeker JC, Chen X. Regulation of Drosophila germline stem cells. Current Opinion in Cell Biology. 60: 27-35. PMID 31014993 DOI: 10.1016/J.Ceb.2019.03.008  0.426
2019 Lim C, Tarayrah L, Chen X. Transcriptional regulation during Drosophila spermatogenesis. Spermatogenesis. 2: 158-166. PMID 23087835 DOI: 10.4161/spmg.21775  0.329
2018 Phatarphekar A, Su Q, Eun SH, Chen X, Rokita SE. The importance of a halotyrosine dehalogenase for fertility. The Journal of Biological Chemistry. PMID 29764939 DOI: 10.1074/Jbc.Ra118.003364  0.618
2018 Gleason RJ, Anand A, Kai T, Chen X. Protecting and Diversifying the Germline. Genetics. 208: 435-471. PMID 29378808 DOI: 10.1534/Genetics.117.300208  0.372
2018 Feng L, Shi Z, Xie J, Ma B, Chen X. Enhancer of polycomb maintains germline activity and genome integrity in Drosophila testis. Cell Death and Differentiation. PMID 29362481 DOI: 10.1038/S41418-017-0056-5  0.393
2018 Kahney EW, Ranjan R, Gleason RJ, Chen X. Symmetry from Asymmetry or Asymmetry from Symmetry? Cold Spring Harbor Symposia On Quantitative Biology. PMID 29348326 DOI: 10.1101/Sqb.2017.82.034272  0.478
2017 Snedeker J, Wooten M, Chen X. The Inherent Asymmetry of DNA Replication. Annual Review of Cell and Developmental Biology. PMID 28800257 DOI: 10.1146/Annurev-Cellbio-100616-060447  0.748
2017 Eun SH, Feng L, Cedeno-Rosario L, Gan Q, Wei G, Cui K, Zhao K, Chen X. Polycomb group gene E(z) is required for spermatogonial dedifferentiation in Drosophila adult testis. Journal of Molecular Biology. PMID 28434938 DOI: 10.1016/J.Jmb.2017.04.012  0.656
2017 Xie J, Wooten M, Tran V, Chen X. Breaking Symmetry - Asymmetric Histone Inheritance in Stem Cells. Trends in Cell Biology. PMID 28268050 DOI: 10.1016/J.Tcb.2017.02.001  0.78
2017 Feng L, Shi Z, Chen X. Enhancer of polycomb coordinates multiple signaling pathways to promote both cyst and germline stem cell differentiation in the Drosophila adult testis. Plos Genetics. 13: e1006571. PMID 28196077 DOI: 10.1371/Journal.Pgen.1006571  0.431
2016 Samarin J, Laketa V, Malz M, Roessler S, Stein I, Horwitz E, Singer S, Dimou E, Cigliano A, Bissinger M, Falk CS, Chen X, Dooley S, Pikarsky E, Calvisi DF, et al. PI3K/AKT/mTOR-dependent stabilization of oncogenic far-upstream element binding proteins in hepatocellular carcinoma cells. Hepatology (Baltimore, Md.). 63: 813-26. PMID 26901106 DOI: 10.1002/hep.28357  0.53
2016 Rycaj K, Cho EJ, Liu X, Chao HP, Liu B, Li Q, Devkota AK, Zhang D, Chen X, Moore J, Dalby KN, Tang DG. Longitudinal tracking of subpopulation dynamics and molecular changes during LNCaP cell castration and identification of inhibitors that could target the PSA-/lo castration-resistant cells. Oncotarget. PMID 26871947 DOI: 10.18632/Oncotarget.7303  0.36
2015 Xie J, Wooten M, Tran V, Chen BC, Pozmanter C, Simbolon C, Betzig E, Chen X. Histone H3 Threonine Phosphorylation Regulates Asymmetric Histone Inheritance in the Drosophila Male Germline. Cell. PMID 26522592 DOI: 10.1016/J.Cell.2015.10.002  0.76
2015 Tarayrah L, Li Y, Gan Q, Chen X. Epigenetic regulator Lid maintains germline stem cells through regulating JAK-STAT signaling pathway activity. Biology Open. PMID 26490676 DOI: 10.1242/Bio.013961  0.428
2015 Lim C, Gandhi S, Biniossek ML, Feng L, Schilling O, Urban S, Chen X. An Aminopeptidase in the Drosophila Testicular Niche Acts in Germline Stem Cell Maintenance and Spermatogonial Dedifferentiation. Cell Reports. PMID 26440886 DOI: 10.1016/J.Celrep.2015.09.001  0.434
2015 Liu X, Chen X, Rycaj K, Chao HP, Deng Q, Jeter C, Liu C, Honorio S, Li H, Davis T, Suraneni M, Laffin B, Qin J, Li Q, Yang T, et al. Systematic dissection of phenotypic, functional, and tumorigenic heterogeneity of human prostate cancer cells. Oncotarget. PMID 26246472 DOI: 10.18632/Oncotarget.4260  0.34
2015 Li Q, Rycaj K, Chen X, Tang DG. Cancer stem cells and cell size: A causal link? Seminars in Cancer Biology. PMID 26241348 DOI: 10.1016/J.Semcancer.2015.07.002  0.392
2015 Feng L, Chen X. Epigenetic regulation of germ cells-remember or forget? Current Opinion in Genetics & Development. 31: 20-7. PMID 25930104 DOI: 10.1016/J.Gde.2015.04.003  0.454
2014 Eun SH, Shi Z, Cui K, Zhao K, Chen X. A non-cell autonomous role of E(z) to prevent germ cells from turning on a somatic cell marker. Science (New York, N.Y.). 343: 1513-6. PMID 24675960 DOI: 10.1126/Science.1246514  0.677
2014 Tran V, Feng L, Chen X. Asymmetric distribution of histones during Drosophila male germline stem cell asymmetric divisions. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 21: 255-69. PMID 23681658 DOI: 10.1007/S10577-013-9356-X  0.479
2013 Tarayrah L, Chen X. Epigenetic regulation in adult stem cells and cancers. Cell & Bioscience. 3: 41. PMID 24172544 DOI: 10.1186/2045-3701-3-41  0.406
2013 Chen H, Chen X, Zheng Y. The nuclear lamina regulates germline stem cell niche organization via modulation of EGFR signaling. Cell Stem Cell. 13: 73-86. PMID 23827710 DOI: 10.1016/J.Stem.2013.05.003  0.411
2013 Barckmann B, Chen X, Kaiser S, Jayaramaiah-Raja S, Rathke C, Dottermusch-Heidel C, Fuller MT, Renkawitz-Pohl R. Three levels of regulation lead to protamine and Mst77F expression in Drosophila. Developmental Biology. 377: 33-45. PMID 23466740 DOI: 10.1016/J.Ydbio.2013.02.018  0.637
2013 Chen X, Liu B, Li Q, Honorio S, Liu X, Liu C, Multani AS, Calhoun-Davis T, Tang DG. Dissociated primary human prostate cancer cells coinjected with the immortalized Hs5 bone marrow stromal cells generate undifferentiated tumors in NOD/SCID-γ mice. Plos One. 8: e56903. PMID 23451107 DOI: 10.1371/Journal.Pone.0056903  0.303
2013 Chepelev I, Chen X. Alternative splicing switching in stem cell lineages. Frontiers in Biology. 8: 50-59. PMID 23399987 DOI: 10.1007/S11515-012-1198-Y  0.42
2013 Tarayrah L, Herz HM, Shilatifard A, Chen X. Histone demethylase dUTX antagonizes JAK-STAT signaling to maintain proper gene expression and architecture of the Drosophila testis niche. Development (Cambridge, England). 140: 1014-23. PMID 23364332 DOI: 10.1242/Dev.089433  0.443
2013 Eun SH, Stoiber PM, Wright HJ, McMurdie KE, Choi CH, Gan Q, Lim C, Chen X. MicroRNAs downregulate Bag of marbles to ensure proper terminal differentiation in the Drosophila male germline. Development (Cambridge, England). 140: 23-30. PMID 23154414 DOI: 10.1242/Dev.086397  0.649
2012 Morillo Prado JR, Chen X, Fuller MT. Polycomb group genes Psc and Su(z)2 maintain somatic stem cell identity and activity in Drosophila. Plos One. 7: e52892. PMID 23285219 DOI: 10.1371/Journal.Pone.0052892  0.657
2012 Tran V, Lim C, Xie J, Chen X. Asymmetric Division of Drosophila Male Germline Stem Cell Shows Asymmetric Histone Distribution Science. 338: 679-682. PMID 23118191 DOI: 10.1126/Science.1226028  0.477
2012 Cuddapah S, Roh TY, Cui K, Jose CC, Fuller MT, Zhao K, Chen X. A novel human polycomb binding site acts as a functional polycomb response element in Drosophila. Plos One. 7: e36365. PMID 22570707 DOI: 10.1371/Journal.Pone.0036365  0.613
2012 Qin J, Liu X, Laffin B, Chen X, Choy G, Jeter CR, Calhoun-Davis T, Li H, Palapattu GS, Pang S, Lin K, Huang J, Ivanov I, Li W, Suraneni MV, et al. The PSA(-/lo) prostate cancer cell population harbors self-renewing long-term tumor-propagating cells that resist castration. Cell Stem Cell. 10: 556-69. PMID 22560078 DOI: 10.1016/J.Stem.2012.03.009  0.353
2012 Tran V, Gan Q, Chen X. Chromatin Immunoprecipitation (ChIP) using Drosophila tissue Journal of Visualized Experiments : Jove. PMID 22473446 DOI: 10.3791/3745  0.436
2011 Yan H, Chen X, Zhang Q, Qin J, Li H, Liu C, Calhoun-Davis T, Coletta LD, Klostergaard J, Fokt I, Skora S, Priebe W, Bi Y, Tang DG. Drug-tolerant cancer cells show reduced tumor-initiating capacity: depletion of CD44 cells and evidence for epigenetic mechanisms. Plos One. 6: e24397. PMID 21935404 DOI: 10.1371/Journal.Pone.0024397  0.322
2011 Chen X, Lu C, Morillo Prado JR, Eun SH, Fuller MT. Sequential changes at differentiation gene promoters as they become active in a stem cell lineage. Development (Cambridge, England). 138: 2441-50. PMID 21610025 DOI: 10.1242/Dev.056572  0.754
2011 Chen X. Stem cells: what can we learn from flies? Fly. 2: 19-28. PMID 18820440 DOI: 10.4161/Fly.5872  0.411
2010 Eun SH, Gan Q, Chen X. Epigenetic regulation of germ cell differentiation. Current Opinion in Cell Biology. 22: 737-43. PMID 20951019 DOI: 10.1016/J.Ceb.2010.09.004  0.71
2010 Kracklauer MP, Wiora HM, Deery WJ, Chen X, Bolival B, Romanowicz D, Simonette RA, Fuller MT, Fischer JA, Beckingham KM. The Drosophila SUN protein Spag4 cooperates with the coiled-coil protein Yuri Gagarin to maintain association of the basal body and spermatid nucleus. Journal of Cell Science. 123: 2763-72. PMID 20647369 DOI: 10.1242/Jcs.066589  0.707
2010 Gan Q, Chepelev I, Wei G, Tarayrah L, Cui K, Zhao K, Chen X. Dynamic regulation of alternative splicing and chromatin structure in Drosophila gonads revealed by RNA-seq Cell Research. 20: 763-783. PMID 20440302 DOI: 10.1038/Cr.2010.64  0.423
2010 Gan Q, Schones DE, Ho Eun S, Wei G, Cui K, Zhao K, Chen X. Monovalent and unpoised status of most genes in undifferentiated cell-enriched Drosophila testis. Genome Biology. 11: R42. PMID 20398323 DOI: 10.1186/Gb-2010-11-4-R42  0.45
2008 Li H, Chen X, Calhoun-Davis T, Claypool K, Tang DG. PC3 human prostate carcinoma cell holoclones contain self-renewing tumor-initiating cells. Cancer Research. 68: 1820-5. PMID 18339862 DOI: 10.1158/0008-5472.Can-07-5878  0.377
2008 Bhatia B, Multani AS, Patrawala L, Chen X, Calhoun-Davis T, Zhou J, Schroeder L, Schneider-Broussard R, Shen J, Pathak S, Chang S, Tang DG. Evidence that senescent human prostate epithelial cells enhance tumorigenicity: cell fusion as a potential mechanism and inhibition by p16INK4a and hTERT. International Journal of Cancer. Journal International Du Cancer. 122: 1483-95. PMID 18059027 DOI: 10.1002/Ijc.23222  0.383
2006 Krishnamoorthy T, Chen X, Govin J, Cheung WL, Dorsey J, Schindler K, Winter E, Allis CD, Guacci V, Khochbin S, Fuller MT, Berger SL. Phosphorylation of histone H4 Ser1 regulates sporulation in yeast and is conserved in fly and mouse spermatogenesis. Genes & Development. 20: 2580-92. PMID 16980586 DOI: 10.1101/Gad.1457006  0.609
2005 Chen X, Hiller M, Sancak Y, Fuller MT. Tissue-specific TAFs counteract Polycomb to turn on terminal differentiation. Science (New York, N.Y.). 310: 869-72. PMID 16272126 DOI: 10.1126/Science.1118101  0.717
2004 Hiller M, Chen X, Pringle MJ, Suchorolski M, Sancak Y, Viswanathan S, Bolival B, Lin TY, Marino S, Fuller MT. Testis-specific TAF homologs collaborate to control a tissue-specific transcription program. Development (Cambridge, England). 131: 5297-308. PMID 15456720 DOI: 10.1242/Dev.01314  0.707
2003 Overstreet E, Chen X, Wendland B, Fischer JA. Either part of a Drosophila epsin protein, divided after the ENTH domain, functions in endocytosis of delta in the developing eye. Current Biology : Cb. 13: 854-60. PMID 12747835 DOI: 10.1016/S0960-9822(03)00326-9  0.6
2002 Chen X, Zhang B, Fischer JA. A specific protein substrate for a deubiquitinating enzyme: Liquid facets is the substrate of Fat facets. Genes & Development. 16: 289-94. PMID 11825870 DOI: 10.1101/Gad.961502  0.573
2002 Chen X, Fischer JA. A P element transformation vector for high levels of gene expression in germ-line cells of the ovary and undifferentiated cells in the developing eye of Drosophila. Plasmid. 47: 61-5. PMID 11798286 DOI: 10.1006/Plas.2001.1546  0.591
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