James R. Garey - Publications

Biology (Cell Biology, Microbiology, Molecular Biology) University of South Florida, Tampa, FL, United States 
Ecology Biology, Oceanography Biology, Molecular Biology

53 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Farid A, Franck AR, Bolin J, Garey JR. Expansion of the genus in North America to include , sp. nov., and , comb. nov. Mycologia. 1-15. PMID 32074024 DOI: 10.1080/00275514.2019.1685359  1
2018 Farid A, Gelardi M, Angelini C, Franck AR, Costanzo F, Kaminsky L, Ercole E, Baroni TJ, White AL, Garey JR, Smith ME, Vizzini A. and are no longer alone: gen. nov. (), a new smooth-spored lamellate genus to accommodate the American species . Fungal Systematics and Evolution. 2: 341-359. PMID 32467893 DOI: 10.3114/fuse.2018.02.10  1
2015 Menning DM, Wynn JG, Garey JR. Karst estuaries are governed by interactions between inland hydrological conditions and sea level Journal of Hydrology. 527: 718-733. DOI: 10.1016/j.jhydrol.2015.05.021  1
2014 Menning DM, Boop LM, Graham ED, Garey JR. Molecular analyses of microbial abundance and diversity in the water column of anchialine caves in Mallorca, Spain International Journal of Speleology. 43: 217-226. DOI: 10.5038/1827-806X.43.2.9  1
2014 Nielsen UN, Ayres E, Wall DH, Li G, Bardgett RD, Wu T, Garey JR. Global-scale patterns of assemblage structure of soil nematodes in relation to climate and ecosystem properties Global Ecology and Biogeography. 23: 968-978. DOI: 10.1111/geb.12177  1
2013 Franck AR, Cochrane BJ, Garey JR. Phylogeny, biogeography, and infrageneric classification of Harrisia (Cactaceae) Systematic Botany. 38: 210-223. DOI: 10.1600/036364413X662105  1
2013 Franck AR, Cochrane BJ, Garey JR. Relationships and dispersal of the Caribbean species of Harrisia (Sect. Harrisia; Cactaceae) using AFLPs and seven DNA regions Taxon. 62: 486-497.  1
2012 Franck AR, Cochrane BJ, Garey JR. Low-copy nuclear primers and ycf1 primers in Cactaceae. American Journal of Botany. 99: e405-7. PMID 23002162 DOI: 10.3732/ajb.1200128  1
2012 Vaughn R, Garnhart N, Garey JR, Thomas WK, Livingston BT. Sequencing and analysis of the gastrula transcriptome of the brittle star Ophiocoma wendtii. Evodevo. 3: 19. PMID 22938175 DOI: 10.1186/2041-9139-3-19  1
2012 Bengtsson J, Hartmann M, Unterseher M, Vaishampayan P, Abarenkov K, Durso L, Bik EM, Garey JR, Eriksson KM, Nilsson RH. Megraft: a software package to graft ribosomal small subunit (16S/18S) fragments onto full-length sequences for accurate species richness and sequencing depth analysis in pyrosequencing-length metagenomes and similar environmental datasets. Research in Microbiology. 163: 407-12. PMID 22824070 DOI: 10.1016/j.resmic.2012.07.001  1
2012 Garey JR, Menning DM. The dynamics of community structure within a submarine coastal spring with an anchialine source Natura Croatica. 21: 43-46.  1
2011 Wu T, Ayres E, Bardgett RD, Wall DH, Garey JR. Molecular study of worldwide distribution and diversity of soil animals. Proceedings of the National Academy of Sciences of the United States of America. 108: 17720-5. PMID 22006309 DOI: 10.1073/pnas.1103824108  1
2011 Garman KM, Rubelmann H, Karlen DJ, Wu T, Garey JR. Comparison of an inactive submarine spring with an active nearshore anchialine spring in Florida Hydrobiologia. 677: 65-87. DOI: 10.1007/s10750-011-0740-2  1
2010 Karlen DJ, Price RE, Pichler T, Garey JR. Changes in benthic macrofauna associated with a shallow-water hydrothermal vent gradient in papua new guinea Pacific Science. 64: 391-404. DOI: 10.2984/64.3.391  1
2009 Holland ND, Campbell TG, Garey JR, Holland LZ, Wilson NG. The Florida amphioxus (Cephalochordata) hosts larvae of the tapeworm Acanthobothrium brevissime: Natural history, anatomy and taxonomic identification of the parasite Acta Zoologica. 90: 75-86. DOI: 10.1111/j.1463-6395.2008.00343.x  1
2009 Wu T, Ayres E, Li G, Bardgett RD, Wall DH, Garey JR. Molecular profiling of soil animal diversity in natural ecosystems: Incongruence of molecular and morphological results Soil Biology and Biochemistry. 41: 849-857. DOI: 10.1016/j.soilbio.2009.02.003  1
2008 Garey JR, McInnes SJ, Nichols PB. Global diversity of tardigrades (Tardigrada) in freshwater Hydrobiologia. 595: 101-106. DOI: 10.1007/s10750-007-9123-0  1
2007 Massey SE, Garey JR. A comparative genomics analysis of codon reassignments reveals a link with mitochondrial proteome size and a mechanism of genetic code change via suppressor tRNAs. Journal of Molecular Evolution. 64: 399-410. PMID 17390094 DOI: 10.1007/s00239-005-0260-7  1
2006 Nichols PB, Nelson DR, Garey JR. A family level analysis of tardigrade phylogeny Hydrobiologia. 558: 53-60. DOI: 10.1007/s10750-005-1414-8  1
2006 Garey JR. The biology of tardigrades: An introduction to the 9th international symposium on Tardigrada Hydrobiologia. 558: 1-3. DOI: 10.1007/s10750-005-1401-0  1
2005 Michael Garman K, Garey JR. The transition of a freshwater karst aquifer to an anoxic marine system Estuaries. 28: 686-693. DOI: 10.1007/BF02732907  1
2004 Harwood VJ, Delahoya NC, Ulrich RM, Kramer MF, Whitlock JE, Garey JR, Lim DV. Molecular confirmation of Enterococcus faecalis and E. faecium from clinical, faecal and environmental sources Letters in Applied Microbiology. 38: 476-482. PMID 15130142 DOI: 10.1111/j.1472-765X.2004.01518.x  1
2004 Mallatt JM, Garey JR, Shultz JW. Ecdysozoan phylogeny and Bayesian inference: first use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kin. Molecular Phylogenetics and Evolution. 31: 178-91. PMID 15019618 DOI: 10.1016/j.ympev.2003.07.013  1
2004 Slomba JM, Garey JR, Essig FB. The Actin I intron - A phylogenetically informative DNA region in Clematis (Ranunculaceae) Sida, Contributions to Botany. 21: 879-886.  1
2003 Massey SE, Moura G, Beltrão P, Almeida R, Garey JR, Tuite MF, Santos MA. Comparative evolutionary genomics unveils the molecular mechanism of reassignment of the CTG codon in Candida spp. Genome Research. 13: 544-57. PMID 12670996 DOI: 10.1101/gr.811003  1
2002 Garey JR. The lesser-known protostome taxa: an introduction and a tribute to robert p. Higgins. Integrative and Comparative Biology. 42: 611-8. PMID 21708757 DOI: 10.1093/icb/42.3.611  1
2002 Bleidorn C, Schmidt-Rhaesa A, Garey JR. Systematic relationships of Nematomorpha based on molecular and morphological data Invertebrate Biology. 121: 357-364.  1
2001 Gray KM, Garey JR. The evolution of bacterial LuxI and LuxR quorum sensing regulators Microbiology. 147: 2379-2387. PMID 11496014  1
2001 Garey JR. Ecdysozoa: The relationship between Cycloneuralia and Panarthropoda Zoologischer Anzeiger. 240: 321-330.  1
2000 Swalla BJ, Cameron CB, Corley LS, Garey JR. Urochordates are monophyletic within the deuterostomes. Systematic Biology. 49: 52-64. PMID 12116483  1
2000 Cameron CB, Garey JR, Swalla BJ. Evolution of the chordate body plan: new insights from phylogenetic analyses of deuterostome phyla. Proceedings of the National Academy of Sciences of the United States of America. 97: 4469-74. PMID 10781046 DOI: 10.1073/pnas.97.9.4469  1
1998 Schmidt-Rhaesa A, Bartolomaeus T, Lemburg C, Ehlers U, Garey JR. The position of the Arthropoda in the phylogenetic system. Journal of Morphology. 238: 263-285. PMID 29852696 DOI: 10.1002/(SICI)1097-4687(199812)238:3<263::AID-JMOR1>3.0.CO;2-L  1
1998 Near TJ, Garey JR, Nadler SA. Phylogenetic relationships of the Acanthocephala inferred from 18S ribosomal DNA sequences. Molecular Phylogenetics and Evolution. 10: 287-98. PMID 10051382 DOI: 10.1006/mpev.1998.0569  1
1998 Mushegian AR, Garey JR, Martin J, Liu LX. Large-scale taxonomic profiling of eukaryotic model organisms: A comparison of orthologous proteins encoded by the human, fly, nematode, and yeast genomes Genome Research. 8: 590-598. PMID 9647634  1
1998 Blaxter ML, De Ley P, Garey JR, Liu LX, Scheldeman P, Vierstraete A, Vanfleteren JR, Mackey LY, Dorris M, Frisse LM, Vida JT, Thomas WK. A molecular evolutionary framework for the phylum Nematoda. Nature. 392: 71-5. PMID 9510248 DOI: 10.1038/32160  1
1998 Schmidt-Rhaesa A, Bartolomaeus T, Lemburg C, Ehlers U, Garey JR. The position of the arthropoda in the phylogenetic system Journal of Morphology. 238: 263-285. DOI: 10.1002/(SICI)1097-4687(199812)238:3<263::AID-JMOR1>3.0.CO;2-L  1
1998 Garey JR, Schmidt-Rhaesa A. The essential role of "Minor" phyla in molecular studies of animal evolution American Zoologist. 38: 907-917.  1
1998 Garey JR, Schmidt-Rhaesa A, Near TJ, Nadler SA. The evolutionary relationships of rotifers and acanthocephalans Hydrobiologia. 387: 83-91.  1
1997 Aguinaldo AM, Turbeville JM, Linford LS, Rivera MC, Garey JR, Raff RA, Lake JA. Evidence for a clade of nematodes, arthropods and other moulting animals. Nature. 387: 489-93. PMID 9168109 DOI: 10.1038/387489a0  1
1996 Garey JR, Near TJ, Nonnemacher MR, Nadler SA. Molecular evidence for Acanthocephala as a subtaxon of Rotifera. Journal of Molecular Evolution. 43: 287-92. PMID 8703095  1
1996 Mackey LY, Winnepenninckx B, De Wachter R, Backeljau T, Emschermann P, Garey JR. 18S rRNA suggests that Entoprocta are protostomes, unrelated to Ectoprocta Journal of Molecular Evolution. 42: 552-559. PMID 8662007 DOI: 10.1007/BF02352285  1
1996 Garey JR, Krotec M, Nelson DR, Brooks J. Molecular analysis supports a tardigrade-arthropod association Invertebrate Biology. 115: 79-88.  1
1995 Winnepenninckx B, Backeljau T, Mackey LY, Brooks JM, De Wachter R, Kumar S, Garey JR. 18S rRNA data indicate that Aschelminthes are polyphyletic in origin and consist of at least three distinct clades Molecular Biology and Evolution. 12: 1132-1137. PMID 8524046  1
1993 Garey JR, Franklin KF, Brown DA, Harrison LM, Metcalf KM, Kushner JP. Analysis of uroporphyrinogen decarboxylase complementary DNAs in sporadic porphyria cutanea tarda Gastroenterology. 105: 165-169. PMID 8099886 DOI: 10.1016/0016-5085(93)90022-5  1
1992 Garey JR, Labbe-Bois R, Chelstowska A, Rytka J, Harrison L, Kushner J, Labbe P. Uroporphyrinogen decarboxylase in Saccharomyces cerevisiae. HEM12 gene sequence and evidence for two conserved glycines essential for enzymatic activity. European Journal of Biochemistry / Febs. 205: 1011-6. PMID 1576986  1
1990 Mehra RK, Garey JR, Winge DR. Selective and tandem amplification of a member of the metallothionein gene family in Candida glabrata Journal of Biological Chemistry. 265: 6369-6375. PMID 2318858  1
1990 Garey JR, Harrison LM, Franklin KF, Metcalf KM, Radisky ES, Kushner JP. Uroporphyrinogen decarboxylase: a splice site mutation causes the deletion of exon 6 in multiple families with porphyria cutanea tarda. The Journal of Clinical Investigation. 86: 1416-22. PMID 2243121 DOI: 10.1172/JCI114856  1
1989 Garey JR, Hansen JL, Harrison LM, Kennedy JB, Kushner JP. A point mutation in the coding region of uroporphyrinogen decarboxylase associated with familial porphyria cutanea tarda. Blood. 73: 892-5. PMID 2920211  1
1989 Mehra RK, Garey JR, Butt TR, Gray WR, Winge DR. Candida glabrata metallothioneins. Cloning and sequence of the genes and characterization of proteins. The Journal of Biological Chemistry. 264: 19747-53. PMID 2584191  1
1989 Garey JR, Wolstenholme DR. Platyhelminth mitochondrial DNA: Evidence for early evolutionary origin of a tRNAserAGN that contains a dihydrouridine arm replacement loop, and of serine-specifying AGA and AGG codons Journal of Molecular Evolution. 28: 374-387. PMID 2545889 DOI: 10.1007/BF02603072  1
1988 Jhiang SM, Garey JR, Riggs AF. Exon-intron organization in genes of earthworm and vertebrate globins Science. 240: 334-336. PMID 2832953  1
1986 Garey JR, Riggs AF. The hemoglobin of Urechis caupo. The cDNA-derived amino acid sequence Journal of Biological Chemistry. 261: 16446-16450. PMID 3782128  1
1984 Garey JR, Riggs AF. Structure and function of hemoglobin from Urechis caupo Archives of Biochemistry and Biophysics. 228: 320-331. PMID 6696435 DOI: 10.1016/0003-9861(84)90073-0  1
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