Shohei Koide - Publications

Affiliations: 
Biochemistry and Molecular Biology University of Chicago, Chicago, IL 
Area:
Biochemistry, Molecular Biology

333 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Koide A, Panchenko T, Wang C, Thannickal SA, Romero LA, Teng KW, Li FZ, Akkappedi P, Corrado AD, Caro J, Diefenbach C, Samanovic MI, Mulligan MJ, Hattori T, Stapleford KA, ... ... Koide S, et al. Two-dimensional multiplexed assay for rapid and deep SARS-CoV-2 serology profiling and for machine learning prediction of neutralization capacity. Biorxiv : the Preprint Server For Biology. PMID 34373852 DOI: 10.1101/2021.08.03.454782  1
2021 Lopez-Redondo M, Fan S, Koide A, Koide S, Beckstein O, Stokes DL. Zinc binding alters the conformational dynamics and drives the transport cycle of the cation diffusion facilitator YiiP. The Journal of General Physiology. 153. PMID 34254979 DOI: 10.1085/jgp.202112873  1
2021 Oury J, Zhang W, Leloup N, Koide A, Corrado AD, Ketavarapu G, Hattori T, Koide S, Burden SJ. Mechanism of disease and therapeutic rescue of Dok7 congenital myasthenia. Nature. PMID 34163073 DOI: 10.1038/s41586-021-03672-3  1
2021 Diefenbach C, Caro J, Koide A, Grossbard M, Goldberg JD, Raphael B, Hymes K, Moskovits T, Kreditor M, Kaminetzky D, Fleur-Lominy SS, Choi J, Thannickal SA, Stapleford KA, Koide S. Impaired Humoral Immunity to SARS-CoV-2 Vaccination in Non-Hodgkin Lymphoma and CLL Patients. Medrxiv : the Preprint Server For Health Sciences. PMID 34100025 DOI: 10.1101/2021.06.02.21257804  1
2021 Teng KW, Tsai ST, Hattori T, Fedele C, Koide A, Yang C, Hou X, Zhang Y, Neel BG, O'Bryan JP, Koide S. Selective and noncovalent targeting of RAS mutants for inhibition and degradation. Nature Communications. 12: 2656. PMID 33976200 DOI: 10.1038/s41467-021-22969-5  1
2021 Khan I, MarElia-Bennet C, Lefler J, Zuberi M, Denbaum E, Koide A, Connor DM, Broome AM, Pécot T, Timmers C, Ostrowski MC, Koide S, O'Bryan JP. Targeting the KRAS α4-α5 allosteric interface inhibits pancreatic cancer tumorigenesis. Small Gtpases. 1-14. PMID 33949915 DOI: 10.1080/21541248.2021.1906621  1
2021 Ivanova EN, Devlin JC, Buus TB, Koide A, Cornelius A, Samanovic MI, Herrera A, Zhang C, Desvignes L, Odum N, Ulrich R, Mulligan MJ, Koide S, Ruggles KV, Herati RS, et al. Discrete immune response signature to SARS-CoV-2 mRNA vaccination versus infection. Medrxiv : the Preprint Server For Health Sciences. PMID 33907755 DOI: 10.1101/2021.04.20.21255677  1
2021 Garnish SE, Meng Y, Koide A, Sandow JJ, Denbaum E, Jacobsen AV, Yeung W, Samson AL, Horne CR, Fitzgibbon C, Young SN, Smith PPC, Webb AI, Petrie EJ, Hildebrand JM, ... ... Koide S, et al. Conformational interconversion of MLKL and disengagement from RIPK3 precede cell death by necroptosis. Nature Communications. 12: 2211. PMID 33850121 DOI: 10.1038/s41467-021-22400-z  1
2021 Sulaiman I, Chung M, Angel L, Koralov S, Wu B, Yeung S, Krolikowski K, Li Y, Duerr R, Schluger R, Thannickal S, Koide A, Rafeq S, Barnett C, Postelnicu R, ... ... Koide S, et al. Microbial signatures in the lower airways of mechanically ventilated COVID19 patients associated with poor clinical outcome. Research Square. PMID 33791687 DOI: 10.21203/rs.3.rs-266050/v1  1
2021 Noval MG, Kaczmarek ME, Koide A, Rodriguez-Rodriguez BA, Louie P, Tada T, Hattori T, Panchenko T, Romero LA, Teng KW, Bazley A, de Vries M, Samanovic MI, Weiser JN, Aifantis I, ... Koide S, et al. Antibody isotype diversity against SARS-CoV-2 is associated with differential serum neutralization capacities. Scientific Reports. 11: 5538. PMID 33692390 DOI: 10.1038/s41598-021-84913-3  1
2021 Sulaiman I, Chung M, Angel L, Tsay JJ, Wu BG, Yeung ST, Krolikowski K, Li Y, Duerr R, Schluger R, Thannickal SA, Koide A, Rafeq S, Barnett C, Postelnicu R, ... ... Koide S, et al. Microbial signatures in the lower airways of mechanically ventilated COVID19 patients associated with poor clinical outcome. Medrxiv : the Preprint Server For Health Sciences. PMID 33655261 DOI: 10.1101/2021.02.23.21252221  1
2021 Fedele C, Li S, Teng KW, Foster CJR, Peng D, Ran H, Mita P, Geer MJ, Hattori T, Koide A, Wang Y, Tang KH, Leinwand J, Wang W, Diskin B, ... ... Koide S, et al. SHP2 inhibition diminishes KRASG12C cycling and promotes tumor microenvironment remodeling. The Journal of Experimental Medicine. 218. PMID 33045063 DOI: 10.1084/jem.20201414  1
2020 Hattori T, Koide A, Panchenko T, Romero LA, Teng KW, Corrado AD, Koide S. Multiplex bead binding assays using off-the-shelf components and common flow cytometers. Journal of Immunological Methods. 112952. PMID 33358997 DOI: 10.1016/j.jim.2020.112952  1
2020 Hattori T, Koide A, Noval MG, Panchenko T, Romero LA, Wen Teng K, Tada T, Landau NR, Stapleford KA, Koide S. The ACE2-binding interface of SARS-CoV-2 Spike inherently deflects immune recognition. Journal of Molecular Biology. 166748. PMID 33310017 DOI: 10.1016/j.jmb.2020.166748  1
2020 Kermani AA, Macdonald CB, Burata OE, Ben Koff B, Koide A, Denbaum E, Koide S, Stockbridge RB. The structural basis of promiscuity in small multidrug resistance transporters. Nature Communications. 11: 6064. PMID 33247110 DOI: 10.1038/s41467-020-19820-8  1
2020 Hattori T, Koide A, Panchenko T, Romero LA, Teng KW, Tada T, Landau NR, Koide S. The ACE2-binding interface of SARS-CoV-2 Spike inherently deflects immune recognition. Biorxiv : the Preprint Server For Biology. PMID 33173869 DOI: 10.1101/2020.11.03.365270  1
2020 Salzman GS, Zhang S, Fernandez CG, Araç D, Koide S. Specific and direct modulation of the interaction between adhesion GPCR GPR56/ADGRG1 and tissue transglutaminase 2 using synthetic ligands. Scientific Reports. 10: 16912. PMID 33037308 DOI: 10.1038/s41598-020-74044-6  1
2020 Sauer DB, Trebesch N, Marden JJ, Cocco N, Song J, Koide A, Koide S, Tajkhorshid E, Wang DN. Structural basis for the reaction cycle of DASS dicarboxylate transporters. Elife. 9. PMID 32869741 DOI: 10.7554/Elife.61350  1
2020 La Sala G, Michiels C, Kükenshöner T, Brandstoetter T, Maurer B, Koide A, Lau K, Pojer F, Koide S, Sexl V, Dumoutier L, Hantschel O. Selective inhibition of STAT3 signaling using monobodies targeting the coiled-coil and N-terminal domains. Nature Communications. 11: 4115. PMID 32807795 DOI: 10.1038/S41467-020-17920-Z  1
2020 Petrie EJ, Birkinshaw RW, Koide A, Denbaum E, Hildebrand JM, Garnish SE, Davies KA, Sandow JJ, Samson AL, Gavin X, Fitzgibbon C, Young SN, Hennessy PJ, Smith PPC, Webb AI, ... Koide S, et al. Identification of MLKL membrane translocation as a checkpoint in necroptotic cell death using Monobodies. Proceedings of the National Academy of Sciences of the United States of America. PMID 32234780 DOI: 10.1073/Pnas.1919960117  1
2020 Lee KY, Fang Z, Enomoto M, Seabrook GG, Zheng L, Koide S, Ikura M, Marshall CB. Two Distinct Structures of Membrane-associated Homodimers of GTP- and GDP-bound KRAS4B Revealed by Paramagnetic Relaxation Enhancement. Angewandte Chemie (International Ed. in English). PMID 32227412 DOI: 10.1002/Anie.202001758  0.01
2020 Hantschel O, Biancalana M, Koide S. Monobodies as enabling tools for structural and mechanistic biology. Current Opinion in Structural Biology. 60: 167-174. PMID 32145686 DOI: 10.1016/J.Sbi.2020.01.015  1
2020 Khan I, Spencer-Smith R, Teng K, Koide A, Koide S, O'Bryan JP. Abstract B01: Inhibition of RAS signaling and tumorigenesis through targeting vulnerabilities in RAS biochemistry Molecular Cancer Research. 18. DOI: 10.1158/1557-3125.Ras18-B01  1
2019 Röck R, Mayrhofer JE, Torres-Quesada O, Enzler F, Raffeiner A, Raffeiner P, Feichtner A, Huber RG, Koide S, Taylor SS, Troppmair J, Stefan E. BRAF inhibitors promote intermediate BRAF(V600E) conformations and binary interactions with activated RAS. Science Advances. 5: eaav8463. PMID 31453322 DOI: 10.1126/Sciadv.Aav8463  0.01
2019 Koide S. Repurposing off-the-shelf antihelix antibodies for enabling structural biology. Proceedings of the National Academy of Sciences of the United States of America. PMID 31427527 DOI: 10.1073/Pnas.1912643116  0.01
2019 Zorba A, Nguyen V, Koide A, Hoemberger M, Zheng Y, Kutter S, Kim C, Koide S, Kern D. Allosteric modulation of a human protein kinase with monobodies. Proceedings of the National Academy of Sciences of the United States of America. PMID 31239342 DOI: 10.1073/Pnas.1906024116  1
2019 Ludwicki MB, Li J, Stephens EA, Roberts RW, Koide S, Hammond PT, DeLisa MP. Broad-Spectrum Proteome Editing with an Engineered Bacterial Ubiquitin Ligase Mimic. Acs Central Science. 5: 852-866. PMID 31139721 DOI: 10.1021/Acscentsci.9B00127  0.01
2019 Panchenko T, Wang W, Denbaum E, Hattori T, Koide A, Filipovic A, Miller G, Koide S. Abstract 2382: Development and testing of the first in class immunotherapy targeting immuno-suppressive δ1 containing γδ T cells for the treatment of pancreatic ductal adenocarcinoma and other solid tumors Immunology. DOI: 10.1158/1538-7445.Sabcs18-2382  1
2019 Chen L, Wang W, Koide A, Bolen J, Miller G, Koide S. Abstract 1551: First in class immunotherapy targeting Galectin-9 promotes T-cell activation and anti-tumor response against pancreatic cancer and other solid tumors Cancer Research. 79: 1551-1551. DOI: 10.1158/1538-7445.Am2019-1551  1
2018 Gupta A, Xu J, Lee S, Tsai ST, Zhou B, Kurosawa K, Werner MS, Koide A, Ruthenburg AJ, Dou Y, Koide S. Facile target validation in an animal model with intracellularly expressed monobodies. Nature Chemical Biology. PMID 30013062 DOI: 10.1038/S41589-018-0099-Z  1
2018 Last NB, Stockbridge RB, Wilson AE, Shane T, Kolmakova-Partensky L, Koide A, Koide S, Miller C. A CLC-type F/H antiporter in ion-swapped conformations. Nature Structural & Molecular Biology. PMID 29941917 DOI: 10.1038/S41594-018-0082-0  1
2018 Tanaka SI, Takahashi T, Koide A, Iwamoto R, Koikeda S, Koide S. Monobody-mediated alteration of lipase substrate specificity. Acs Chemical Biology. PMID 29757606 DOI: 10.1021/Acschembio.8B00384  1
2018 Hattori T, Koide S. Next-generation antibodies for post-translational modifications. Current Opinion in Structural Biology. 51: 141-148. PMID 29753204 DOI: 10.1016/J.Sbi.2018.04.006  1
2018 Makabe K, Nakamura T, Dhar D, Ikura T, Koide S, Kuwajima K. An overlapping region between the two terminal folding units of the outer surface protein A (OspA) controls its folding behavior. Journal of Molecular Biology. PMID 29709572 DOI: 10.1016/J.Jmb.2018.04.025  1
2018 Zhang Z, Liang WG, Bailey LJ, Tan YZ, Wei H, Wang A, Farcasanu M, Woods VA, McCord LA, Lee D, Shang W, Deprez-Poulain R, Deprez B, Liu DR, Koide A, Koide S, et al. Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme. Elife. 7. PMID 29596046 DOI: 10.7554/Elife.33572  1
2018 Diver MM, Pedi L, Koide A, Koide S, Long SB. Atomic structure of the eukaryotic intramembrane RAS methyltransferase ICMT. Nature. PMID 29342140 DOI: 10.1038/Nature25439  1
2018 Zhang Z, Liang WG, Bailey LJ, Tan YZ, Wei H, Wang A, Farcasanu M, Woods VA, McCord LA, Lee D, Shang W, Deprez-Poulain R, Deprez B, Liu DR, Koide A, ... Koide S, et al. Author response: Ensemble cryoEM elucidates the mechanism of insulin capture and degradation by human insulin degrading enzyme Elife. DOI: 10.7554/Elife.33572.086  1
2018 Diver MM, Pedi L, Koide A, Koide S, Long SB. Atomic structure and substrate access in the intramembrane Ras methyltransferase ICMT Nature. DOI: 10.2210/Pdb5Vg9/Pdb  1
2017 Reckel S, Gehin C, Tardivon D, Georgeon S, Kükenshöner T, Löhr F, Koide A, Buchner L, Panjkovich A, Reynaud A, Pinho S, Gerig B, Svergun D, Pojer F, Güntert P, ... Koide S, et al. Structural and functional dissection of the DH and PH domains of oncogenic Bcr-Abl tyrosine kinase. Nature Communications. 8: 2101. PMID 29235475 DOI: 10.1038/S41467-017-02313-6  1
2017 Ghosh E, Srivastava A, Baidya M, Kumari P, Dwivedi H, Nidhi K, Ranjan R, Dogra S, Koide A, Yadav PN, Sidhu SS, Koide S, Shukla AK. A synthetic intrabody-based selective and generic inhibitor of GPCR endocytosis. Nature Nanotechnology. PMID 28967893 DOI: 10.1038/Nnano.2017.188  1
2017 Salzman GS, Zhang S, Gupta A, Koide A, Koide S, Araç D. Stachel-independent modulation of GPR56/ADGRG1 signaling by synthetic ligands directed to its extracellular region. Proceedings of the National Academy of Sciences of the United States of America. PMID 28874577 DOI: 10.1073/Pnas.1708810114  1
2017 Spencer-Smith R, Li L, Prasad S, Koide A, Koide S, O'Bryan JP. Targeting the α4-α5 interface of RAS results in multiple levels of inhibition. Small Gtpases. 0. PMID 28692342 DOI: 10.1080/21541248.2017.1333188  1
2017 Rizk SS, Mukherjee S, Koide A, Koide S, Kossiakoff AA. Targeted rescue of cancer-associated IDH1 mutant activity using an engineered synthetic antibody. Scientific Reports. 7: 556. PMID 28373671 DOI: 10.1038/S41598-017-00728-1  1
2017 Kükenshöner T, Schmit NE, Bouda E, Sha F, Pojer F, Koide A, Seeliger M, Koide S, Hantschel O. Selective Targeting of SH2 Domain-Phosphotyrosine Interactions of Src Family Tyrosine Kinases with Monobodies. Journal of Molecular Biology. PMID 28347651 DOI: 10.1016/J.Jmb.2017.03.023  1
2017 Sha F, Salzman G, Gupta A, Koide S. Monobodies and Other Synthetic Binding Proteins for Expanding Protein Science. Protein Science : a Publication of the Protein Society. PMID 28249355 DOI: 10.1002/Pro.3148  1
2017 Bowman A, Koide A, Goodman JS, Colling ME, Zinne D, Koide S, Ladurner AG. sNASP and ASF1A function through both competitive and compatible modes of histone binding. Nucleic Acids Research. 45: 643-656. PMID 28123037 DOI: 10.1093/Nar/Gkw892  1
2016 Spencer-Smith R, Koide A, Zhou Y, Eguchi RR, Sha F, Gajwani P, Santana D, Gupta A, Jacobs M, Herrero-Garcia E, Cobbert J, Lavoie H, Smith M, Rajakulendran T, Dowdell E, ... ... Koide S, et al. Inhibition of RAS function through targeting an allosteric regulatory site. Nature Chemical Biology. PMID 27820802 DOI: 10.1038/Nchembio.2231  1
2016 Sachleben JR, Adhikari AN, Gawlak G, Hoey RJ, Liu G, Joachimiak A, Montelione GT, Sosnick TR, Koide S. Aromatic Claw: A new fold with high aromatic content that evades structural prediction. Protein Science : a Publication of the Protein Society. PMID 27750371 DOI: 10.1002/Pro.3069  1
2016 Salzman GS, Ackerman SD, Ding C, Koide A, Leon K, Luo R, Stoveken HM, Fernandez CG, Tall GG, Piao X, Monk KR, Koide S, Araç D. Structural Basis for Regulation of GPR56/ADGRG1 by Its Alternatively Spliced Extracellular Domains. Neuron. 91: 1292-1304. PMID 27657451 DOI: 10.1016/J.Neuron.2016.08.022  1
2016 Shao Y, Huang H, Qin D, Li NS, Koide A, Staley JP, Koide S, Kossiakoff AA, Piccirilli JA. Specific Recognition of a Single-stranded RNA Sequence by a Synthetic Antibody Fragment. Journal of Molecular Biology. PMID 27593161 DOI: 10.1016/J.Jmb.2016.08.029  1
2016 Wojcik J, Lamontanara AJ, Grabe G, Koide A, Akin L, Gerig B, Hantschel O, Koide S. Allosteric Inhibition of Bcr-Abl Kinase by High-Affinity Monobody Inhibitors Directed to the SH2-Kinase Interface. The Journal of Biological Chemistry. PMID 26912659 DOI: 10.1074/Jbc.M115.707901  1
2016 Hattori T, Lai D, Dementieva IS, Montaño SP, Kurosawa K, Zheng Y, Akin LR, Świst-Rosowska KM, Grzybowski AT, Koide A, Krajewski K, Strahl BD, Kelleher NL, Ruthenburg AJ, Koide S. Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation. Proceedings of the National Academy of Sciences of the United States of America. PMID 26862167 DOI: 10.1073/Pnas.1522691113  1
2015 Nady N, Gupta A, Ma Z, Swigut T, Koide A, Koide S, Wysocka J. ETO family protein Mtgr1 mediates Prdm14 functions in stem cell maintenance and primordial germ cell formation. Elife. 4. PMID 26523391 DOI: 10.7554/Elife.10150  1
2015 Zhong N, Loppnau P, Seitova A, Ravichandran M, Fenner M, Jain H, Bhattacharya A, Hutchinson A, Paduch M, Lu V, Olszewski M, Kossiakoff AA, Dowdell E, Koide A, Koide S, et al. Optimizing Production of Antigens and Fabs in the Context of Generating Recombinant Antibodies to Human Proteins. Plos One. 10: e0139695. PMID 26437229 DOI: 10.1371/Journal.Pone.0139695  1
2015 Stockbridge RB, Kolmakova-Partensky L, Shane T, Koide A, Koide S, Miller C, Newstead S. Crystal structures of a double-barrelled fluoride ion channel. Nature. PMID 26344196 DOI: 10.1038/Nature14981  1
2015 Tanaka S, Takahashi T, Koide A, Ishihara S, Koikeda S, Koide S. Monobody-mediated alteration of enzyme specificity. Nature Chemical Biology. 11: 762-4. PMID 26322825 DOI: 10.1038/Nchembio.1896  1
2015 Stuwe T, Bley CJ, Thierbach K, Petrovic S, Schilbach S, Mayo DJ, Perriches T, Rundlet EJ, Jeon YE, Collins LN, Huber FM, Lin DH, Paduch M, Koide A, Lu V, ... Koide S, et al. Architecture of the fungal nuclear pore inner ring complex. Science (New York, N.Y.). PMID 26316600 DOI: 10.1126/Science.Aac9176  1
2015 Hornsby M, Paduch M, Miersch S, Sääf A, Matsuguchi T, Lee B, Wypisniak K, Doak A, King D, Usatyuk S, Perry K, Lu V, Thomas W, Luke J, Goodman J, ... Koide S, et al. A High Through-put Platform for Recombinant Antibodies to Folded Proteins. Molecular & Cellular Proteomics : McP. PMID 26290498 DOI: 10.1074/Mcp.O115.052209  1
2015 Marcon E, Jain H, Bhattacharya A, Guo H, Phanse S, Pu S, Byram G, Collins BC, Dowdell E, Fenner M, Guo X, Hutchinson A, Kennedy JJ, Krastins B, Larsen B, ... ... Koide S, et al. Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation. Nature Methods. PMID 26121405 DOI: 10.1038/Nmeth.3472  1
2015 Miersch S, Li Z, Hanna R, McLaughlin ME, Hornsby M, Matsuguchi T, Paduch M, Sääf A, Wells J, Koide S, Kossiakoff A, Sidhu SS. Scalable high throughput selection from phage-displayed synthetic antibody libraries. Journal of Visualized Experiments : Jove. 51492. PMID 25651360 DOI: 10.3791/51492  1
2015 Biancalana M, Makabe K, Yan S, Koide S. Aromatic cluster mutations produce focal modulations of β-sheet structure. Protein Science : a Publication of the Protein Society. 24: 841-9. PMID 25645104 DOI: 10.1002/Pro.2657  1
2015 Nady N, Gupta A, Ma Z, Swigut T, Koide A, Koide S, Wysocka J. Author response: ETO family protein Mtgr1 mediates Prdm14 functions in stem cell maintenance and primordial germ cell formation Elife. DOI: 10.7554/Elife.10150.033  1
2015 Griffin C, Miersch S, Marcon E, Banerjee S, Wells J, Hornsby M, Kossiakoff A, Koide S, Paduch M, Sidhu S, Moffat J. Validation of Recombinant Antibodies Against Human Transcription Factors The Faseb Journal. 29. DOI: 10.1096/Fasebj.29.1_Supplement.571.13  1
2015 Tanaka Si, Takahashi T, Koide A, Ishihara S, Koikeda S, Koide S. Monobody-mediated alteration of enzyme specificity Nature Chemical Biology. DOI: 10.1038/nchembio.1896  1
2014 Zhang X, Hoey R, Koide A, Dolios G, Paduch M, Nguyen P, Wu X, Li Y, Wagner SL, Wang R, Koide S, Sisodia SS. A synthetic antibody fragment targeting nicastrin affects assembly and trafficking of γ-secretase. The Journal of Biological Chemistry. 289: 34851-61. PMID 25352592 DOI: 10.1074/Jbc.M114.609636  1
2014 Stockbridge RB, Koide A, Miller C, Koide S. Proof of dual-topology architecture of Fluc F- channels with monobody blockers. Nature Communications. 5: 5120. PMID 25290819 DOI: 10.1038/Ncomms6120  1
2014 Jose CC, Xu B, Jagannathan L, Trac C, Mallela RK, Hattori T, Lai D, Koide S, Schones DE, Cuddapah S. Epigenetic dysregulation by nickel through repressive chromatin domain disruption. Proceedings of the National Academy of Sciences of the United States of America. 111: 14631-6. PMID 25246589 DOI: 10.1073/Pnas.1406923111  1
2014 Koide S, Kortemme T. Editorial overview: Engineering and design: raising the bar through innovation and integration. Current Opinion in Structural Biology. 27: vi-viii. PMID 25175941 DOI: 10.1016/J.Sbi.2014.08.004  1
2014 Shukla AK, Westfield GH, Xiao K, Reis RI, Huang LY, Tripathi-Shukla P, Qian J, Li S, Blanc A, Oleskie AN, Dosey AM, Su M, Liang CR, Gu LL, Shan JM, ... ... Koide S, et al. Visualization of arrestin recruitment by a G-protein-coupled receptor. Nature. 512: 218-22. PMID 25043026 DOI: 10.1038/Nature13430  1
2014 Yasui N, Findlay GM, Gish GD, Hsiung MS, Huang J, Tucholska M, Taylor L, Smith L, Boldridge WC, Koide A, Pawson T, Koide S. Directed network wiring identifies a key protein interaction in embryonic stem cell differentiation. Molecular Cell. 54: 1034-41. PMID 24910098 DOI: 10.1016/J.Molcel.2014.05.002  1
2014 Koide S, Baba T. Causal extraction of black hole rotational energy by various kinds of electromagnetic fields Astrophysical Journal. 792. DOI: 10.1088/0004-637X/792/2/88  1
2013 Sha F, Gencer EB, Georgeon S, Koide A, Yasui N, Koide S, Hantschel O. Dissection of the BCR-ABL signaling network using highly specific monobody inhibitors to the SHP2 SH2 domains. Proceedings of the National Academy of Sciences of the United States of America. 110: 14924-9. PMID 23980151 DOI: 10.1073/Pnas.1303640110  1
2013 Hattori T, Taft JM, Swist KM, Luo H, Witt H, Slattery M, Koide A, Ruthenburg AJ, Krajewski K, Strahl BD, White KP, Farnham PJ, Zhao Y, Koide S. Recombinant antibodies to histone post-translational modifications. Nature Methods. 10: 992-5. PMID 23955773 DOI: 10.1038/Nmeth.2605  1
2013 McCord LA, Liang WG, Dowdell E, Kalas V, Hoey RJ, Koide A, Koide S, Tang WJ. Conformational states and recognition of amyloidogenic peptides of human insulin-degrading enzyme. Proceedings of the National Academy of Sciences of the United States of America. 110: 13827-32. PMID 23922390 DOI: 10.1073/Pnas.1304575110  1
2013 Shukla AK, Manglik A, Kruse AC, Xiao K, Reis RI, Tseng WC, Staus DP, Hilger D, Uysal S, Huang LY, Paduch M, Tripathi-Shukla P, Koide A, Koide S, Weis WI, et al. Structure of active β-arrestin-1 bound to a G-protein-coupled receptor phosphopeptide. Nature. 497: 137-41. PMID 23604254 DOI: 10.1038/Nature12120  1
2013 Koide S, Huang J. Generation of high-performance binding proteins for peptide motifs by affinity clamping. Methods in Enzymology. 523: 285-302. PMID 23422435 DOI: 10.1016/B978-0-12-394292-0.00013-8  1
2013 Lu M, Symersky J, Radchenko M, Koide A, Guo Y, Nie R, Koide S. Structures of a Na+-coupled, substrate-bound MATE multidrug transporter. Proceedings of the National Academy of Sciences of the United States of America. 110: 2099-104. PMID 23341609 DOI: 10.1073/Pnas.1219901110  1
2013 Paduch M, Koide A, Uysal S, Rizk SS, Koide S, Kossiakoff AA. Generating conformation-specific synthetic antibodies to trap proteins in selected functional states. Methods (San Diego, Calif.). 60: 3-14. PMID 23280336 DOI: 10.1016/J.Ymeth.2012.12.010  1
2013 Persson H, Ye W, Wernimont A, Adams JJ, Koide A, Koide S, Lam R, Sidhu SS. CDR-H3 diversity is not required for antigen recognition by synthetic antibodies. Journal of Molecular Biology. 425: 803-11. PMID 23219464 DOI: 10.1016/J.Jmb.2012.11.037  1
2013 Koide S, Kakimoto KI. Crystallographic orientation of (Li,Na,K)NbO3 lead-free piezoelectric crystal Key Engineering Materials. 566: 68-71. DOI: 10.4028/www.scientific.net/KEM.566.68  1
2012 Nishikori S, Hattori T, Fuchs SM, Yasui N, Wojcik J, Koide A, Strahl BD, Koide S. Broad ranges of affinity and specificity of anti-histone antibodies revealed by a quantitative peptide immunoprecipitation assay. Journal of Molecular Biology. 424: 391-9. PMID 23041298 DOI: 10.1016/J.Jmb.2012.09.022  1
2012 Miller KR, Koide A, Leung B, Fitzsimmons J, Yoder B, Yuan H, Jay M, Sidhu SS, Koide S, Collins EJ. T cell receptor-like recognition of tumor in vivo by synthetic antibody fragment. Plos One. 7: e43746. PMID 22916301 DOI: 10.1371/Journal.Pone.0043746  1
2012 Koide A, Koide S. Affinity maturation of single-domain antibodies by yeast surface display. Methods in Molecular Biology (Clifton, N.J.). 911: 431-43. PMID 22886267 DOI: 10.1007/978-1-61779-968-6_26  1
2012 Gilbreth RN, Koide S. Structural insights for engineering binding proteins based on non-antibody scaffolds. Current Opinion in Structural Biology. 22: 413-20. PMID 22749196 DOI: 10.1016/J.Sbi.2012.06.001  1
2012 Zhang X, Hoey RJ, Lin G, Koide A, Leung B, Ahn K, Dolios G, Paduch M, Ikeuchi T, Wang R, Li YM, Koide S, Sisodia SS. Identification of a tetratricopeptide repeat-like domain in the nicastrin subunit of γ-secretase using synthetic antibodies. Proceedings of the National Academy of Sciences of the United States of America. 109: 8534-9. PMID 22586122 DOI: 10.1073/Pnas.1202691109  1
2012 Kitahara R, Simorellis AK, Hata K, Maeno A, Yokoyama S, Koide S, Akasaka K. A delicate interplay of structure, dynamics, and thermodynamics for function: a high pressure NMR study of outer surface protein A. Biophysical Journal. 102: 916-26. PMID 22385863 DOI: 10.1016/J.Bpj.2011.12.010  1
2012 Koide S, Koide A, Lipovšek D. Target-binding proteins based on the 10th human fibronectin type III domain (¹⁰Fn3). Methods in Enzymology. 503: 135-56. PMID 22230568 DOI: 10.1016/B978-0-12-396962-0.00006-9  1
2012 Koide A, Wojcik J, Gilbreth RN, Hoey RJ, Koide S. Teaching an old scaffold new tricks: monobodies constructed using alternative surfaces of the FN3 scaffold. Journal of Molecular Biology. 415: 393-405. PMID 22198408 DOI: 10.1016/J.Jmb.2011.12.019  1
2011 Grebien F, Hantschel O, Wojcik J, Kaupe I, Kovacic B, Wyrzucki AM, Gish GD, Cerny-Reiterer S, Koide A, Beug H, Pawson T, Valent P, Koide S, Superti-Furga G. Targeting the SH2-kinase interface in Bcr-Abl inhibits leukemogenesis. Cell. 147: 306-19. PMID 22000011 DOI: 10.1016/J.Cell.2011.08.046  1
2011 Uysal S, Cuello LG, Cortes DM, Koide S, Kossiakoff AA, Perozo E. Mechanism of activation gating in the full-length KcsA K+ channel. Proceedings of the National Academy of Sciences of the United States of America. 108: 11896-9. PMID 21730186 DOI: 10.1073/Pnas.1105112108  1
2011 Gilbreth RN, Truong K, Madu I, Koide A, Wojcik JB, Li NS, Piccirilli JA, Chen Y, Koide S. Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design. Proceedings of the National Academy of Sciences of the United States of America. 108: 7751-6. PMID 21518904 DOI: 10.1073/Pnas.1102294108  1
2011 Koldobskaya Y, Duguid EM, Shechner DM, Suslov NB, Ye J, Sidhu SS, Bartel DP, Koide S, Kossiakoff AA, Piccirilli JA. A portable RNA sequence whose recognition by a synthetic antibody facilitates structural determination. Nature Structural & Molecular Biology. 18: 100-6. PMID 21151117 DOI: 10.1038/Nsmb.1945  1
2011 Koide S, Morino R. Group velocity and causality in standard relativistic resistive magnetohydrodynamics Physical Review D - Particles, Fields, Gravitation and Cosmology. 84. DOI: 10.1103/PhysRevD.84.083009  1
2011 Koide S. Charge separation instability in an unmagnetized disk plasma around a Kerr black hole Physical Review D - Particles, Fields, Gravitation and Cosmology. 83. DOI: 10.1103/PhysRevD.83.023003  1
2011 Koide S, Takeda H. Common Languages for Web Semantics Communications in Computer and Information Science. 230: 148-162. DOI: 10.1007/978-3-642-23391-3_11  1
2011 Koide S, Takeda H. Object-oriented programming based on OWL semantics Computer Software. 28: 236-260.  1
2010 Shemon AN, Heil GL, Granovsky AE, Clark MM, McElheny D, Chimon A, Rosner MR, Koide S. Characterization of the Raf kinase inhibitory protein (RKIP) binding pocket: NMR-based screening identifies small-molecule ligands. Plos One. 5: e10479. PMID 20463977 DOI: 10.1371/Journal.Pone.0010479  1
2010 Biancalana M, Koide S. Molecular mechanism of Thioflavin-T binding to amyloid fibrils. Biochimica Et Biophysica Acta. 1804: 1405-12. PMID 20399286 DOI: 10.1016/J.Bbapap.2010.04.001  1
2010 Wojcik J, Hantschel O, Grebien F, Kaupe I, Bennett KL, Barkinge J, Jones RB, Koide A, Superti-Furga G, Koide S. A potent and highly specific FN3 monobody inhibitor of the Abl SH2 domain. Nature Structural & Molecular Biology. 17: 519-27. PMID 20357770 DOI: 10.1038/Nsmb.1793  1
2010 Huang J, Koide S. Rational conversion of affinity reagents into label-free sensors for Peptide motifs by designed allostery. Acs Chemical Biology. 5: 273-7. PMID 20143785 DOI: 10.1021/Cb900284C  1
2010 Biancalana M, Makabe K, Koide S. Minimalist design of water-soluble cross-beta architecture. Proceedings of the National Academy of Sciences of the United States of America. 107: 3469-74. PMID 20133689 DOI: 10.1073/Pnas.0912654107  1
2010 Koide S. Generalized general relativistic magnetohydrodynamic equations and distinctive plasma dynamics around rotating black holes Astrophysical Journal. 708: 1459-1474. DOI: 10.1088/0004-637X/708/2/1459  1
2010 Koide S. General relativistic plasmas around rotating black holes Proceedings of the International Astronomical Union. 6: 32-40. DOI: 10.1017/S1743921310015619  1
2010 Mesquita JB, Koide S. Basin water quality network design: Optimum sampling sites located by information theory Iahs-Aish Publication. 338: 39-40.  1
2010 Koide S, Takeda H. Common lanugages for semantic WWW: Beyond RDF and OWL Enase 2010 - Proceedings of the 5th International Conference On Evaluation of Novel Approaches to Software Engineering. 86-95.  1
2009 Takacs Z, Toups M, Kollewe A, Johnson E, Cuello LG, Driessens G, Biancalana M, Koide A, Ponte CG, Perozo E, Gajewski TF, Suarez-Kurtz G, Koide S, Goldstein SA. A designer ligand specific for Kv1.3 channels from a scorpion neurotoxin-based library. Proceedings of the National Academy of Sciences of the United States of America. 106: 22211-6. PMID 20007782 DOI: 10.1073/Pnas.0910123106  1
2009 Huang J, Nagy SS, Koide A, Rock RS, Koide S. A peptide tag system for facile purification and single-molecule immobilization. Biochemistry. 48: 11834-6. PMID 19928925 DOI: 10.1021/Bi901756N  1
2009 Wu C, Biancalana M, Koide S, Shea JE. Binding modes of thioflavin-T to the single-layer beta-sheet of the peptide self-assembly mimics. Journal of Molecular Biology. 394: 627-33. PMID 19799914 DOI: 10.1016/J.Jmb.2009.09.056  1
2009 Koide A, Wojcik J, Gilbreth RN, Reichel A, Piehler J, Koide S. Accelerating phage-display library selection by reversible and site-specific biotinylation. Protein Engineering, Design & Selection : Peds. 22: 685-90. PMID 19737805 DOI: 10.1093/Protein/Gzp053  1
2009 Koide S. Generation of new protein functions by nonhomologous combinations and rearrangements of domains and modules. Current Opinion in Biotechnology. 20: 398-404. PMID 19700302 DOI: 10.1016/J.Copbio.2009.07.007  1
2009 Huang J, Makabe K, Biancalana M, Koide A, Koide S. Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution. Journal of Molecular Biology. 392: 1221-31. PMID 19646997 DOI: 10.1016/J.Jmb.2009.07.067  1
2009 Shemon AN, Eves EM, Clark MC, Heil G, Granovsky A, Zeng L, Imamoto A, Koide S, Rosner MR. Raf Kinase Inhibitory Protein protects cells against locostatin-mediated inhibition of migration. Plos One. 4: e6028. PMID 19551145 DOI: 10.1371/Journal.Pone.0006028  1
2009 Koide S. Engineering of recombinant crystallization chaperones. Current Opinion in Structural Biology. 19: 449-57. PMID 19477632 DOI: 10.1016/J.Sbi.2009.04.008  1
2009 Wang Y, Song W, Li S, Guan X, Miao S, Zong S, Koide SS, Wang L. GC-1 mRHBDD1 knockdown spermatogonia cells lose their spermatogenic capacity in mouse seminiferous tubules. Bmc Cell Biology. 10: 25. PMID 19358743 DOI: 10.1186/1471-2121-10-25  0.01
2009 Uysal S, Vásquez V, Tereshko V, Esaki K, Fellouse FA, Sidhu SS, Koide S, Perozo E, Kossiakoff A. Crystal structure of full-length KcsA in its closed conformation. Proceedings of the National Academy of Sciences of the United States of America. 106: 6644-9. PMID 19346472 DOI: 10.1073/Pnas.0810663106  1
2009 Koide S, Sidhu SS. The importance of being tyrosine: lessons in molecular recognition from minimalist synthetic binding proteins. Acs Chemical Biology. 4: 325-34. PMID 19298050 DOI: 10.1021/Cb800314V  1
2009 Granovsky AE, Clark MC, McElheny D, Heil G, Hong J, Liu X, Kim Y, Joachimiak G, Joachimiak A, Koide S, Rosner MR. Raf kinase inhibitory protein function is regulated via a flexible pocket and novel phosphorylation-dependent mechanism. Molecular and Cellular Biology. 29: 1306-20. PMID 19103740 DOI: 10.1128/Mcb.01271-08  1
2009 Biancalana M, Makabe K, Koide A, Koide S. Molecular mechanism of thioflavin-T binding to the surface of beta-rich peptide self-assemblies. Journal of Molecular Biology. 385: 1052-63. PMID 19038267 DOI: 10.1016/J.Jmb.2008.11.006  1
2009 Koide S, Takeda H. MetaCircularity and MOP in common lisp for OWL full Proceedings of the 6th European Lisp Workshop: European Conference On Object-Oriented Programming, Elw'09. 28-34. DOI: 10.1145/1562868.1562872  1
2009 Koide S. Generalized relativistic magnetohydrodynamic equations for pair and electron-ion plasmas Astrophysical Journal. 696: 2220-2233. DOI: 10.1088/0004-637X/696/2/2220  1
2009 Koide S. Generalized GRMHD equations and their implications Proceedings of the 19th Workshop On General Relativity and Gravitation in Japan, Jgrg 2009. 197-200.  1
2009 Takada E, Koide S. Training of sign language interpreters in Japan: Achievements and challenges International Perspectives On Sign Language Interpreter Education. 190-199.  1
2009 Koide S, Takeda H. SWCLOS user's manual Nii Technical Reports. 1-94.  1
2009 Koide S, Kato M. Altitude-aware human navigation system with transition preferences considered Intelligent Transportation Society of America - 12th World Congress On Intelligent Transport Systems 2005. 1: 423-434.  1
2008 Makabe K, Koide S. The promiscuity of beta-strand pairing allows for rational design of beta-sheet face inversion. Journal of the American Chemical Society. 130: 14370-1. PMID 18842042 DOI: 10.1021/Ja805011H  1
2008 Biancalana M, Makabe K, Koide A, Koide S. Aromatic cross-strand ladders control the structure and stability of beta-rich peptide self-assembly mimics. Journal of Molecular Biology. 383: 205-13. PMID 18762191 DOI: 10.1016/J.Jmb.2008.08.031  1
2008 Dutta S, Koide A, Koide S. High-throughput analysis of the protein sequence-stability landscape using a quantitative yeast surface two-hybrid system and fragment reconstitution. Journal of Molecular Biology. 382: 721-33. PMID 18674545 DOI: 10.1016/J.Jmb.2008.07.036  1
2008 Kossiakoff AA, Koide S. Understanding mechanisms governing protein-protein interactions from synthetic binding interfaces. Current Opinion in Structural Biology. 18: 499-506. PMID 18638552 DOI: 10.1016/J.Sbi.2008.06.004  1
2008 Gilbreth RN, Esaki K, Koide A, Sidhu SS, Koide S. A dominant conformational role for amino acid diversity in minimalist protein-protein interfaces. Journal of Molecular Biology. 381: 407-18. PMID 18602117 DOI: 10.1016/J.Jmb.2008.06.014  1
2008 Huang J, Koide A, Makabe K, Koide S. Design of protein function leaps by directed domain interface evolution. Proceedings of the National Academy of Sciences of the United States of America. 105: 6578-83. PMID 18445649 DOI: 10.1073/Pnas.0801097105  1
2008 Tereshko V, Uysal S, Koide A, Margalef K, Koide S, Kossiakoff AA. Toward chaperone-assisted crystallography: protein engineering enhancement of crystal packing and X-ray phasing capabilities of a camelid single-domain antibody (VHH) scaffold. Protein Science : a Publication of the Protein Society. 17: 1175-87. PMID 18445622 DOI: 10.1110/Ps.034892.108  1
2008 Makabe K, Biancalana M, Yan S, Tereshko V, Gawlak G, Miller-Auer H, Meredith SC, Koide S. High-resolution structure of a self-assembly-competent form of a hydrophobic peptide captured in a soluble beta-sheet scaffold. Journal of Molecular Biology. 378: 459-67. PMID 18367205 DOI: 10.1016/J.Jmb.2008.02.051  1
2008 Ye JD, Tereshko V, Frederiksen JK, Koide A, Fellouse FA, Sidhu SS, Koide S, Kossiakoff AA, Piccirilli JA. Synthetic antibodies for specific recognition and crystallization of structured RNA. Proceedings of the National Academy of Sciences of the United States of America. 105: 82-7. PMID 18162543 DOI: 10.1073/Pnas.0709082105  1
2008 Mallik B, Zhang L, Koide S, Morikis D. pH dependence of stability of the 10th human fibronectin type III domain: a computational study. Biotechnology Progress. 24: 48-55. PMID 17935345 DOI: 10.1021/Bp0700915  1
2008 Koide S, Yasokawa D. Growth prediction of mycelial mat and fruiting zone diameters of Aspergillus niger subjected to temperature changes Nippon Shokuhin Kagaku Kogaku Kaishi. 55: 338-344. DOI: 10.3136/nskkk.55.338  1
2008 Koide S. Propagation of electromagnetic waves in resistive pair plasma and causal relativistic magnetohydrodynamics Physical Review D - Particles, Fields, Gravitation and Cosmology. 78. DOI: 10.1103/PhysRevD.78.125026  1
2008 Koide S, Arai K. Energy extraction from a rotating black hole by magnetic reconnection in the ergosphere Astrophysical Journal. 682: 1124-1133. DOI: 10.1086/589497  1
2008 Lin G, Kim S, Leung B, Koide A, Koide S, Sisodia SS. P3-336: Purification and cocrystallization of nicastrin ectodomain Alzheimers & Dementia. 4. DOI: 10.1016/J.Jalz.2008.05.1905  1
2008 Koide S. General relativistic simulation of jet formation in kerr black hole magnetosphere Eso Astrophysics Symposia. 2008: 441-444. DOI: 10.1007/978-3-540-74713-0_101  1
2007 Makabe K, Yan S, Tereshko V, Gawlak G, Koide S. Beta-strand flipping and slipping triggered by turn replacement reveal the opportunistic nature of beta-strand pairing. Journal of the American Chemical Society. 129: 14661-9. PMID 17985889 DOI: 10.1021/Ja074252C  1
2007 Koide A, Tereshko V, Uysal S, Margalef K, Kossiakoff AA, Koide S. Exploring the capacity of minimalist protein interfaces: interface energetics and affinity maturation to picomolar KD of a single-domain antibody with a flat paratope. Journal of Molecular Biology. 373: 941-53. PMID 17888451 DOI: 10.1016/J.Jmb.2007.08.027  1
2007 Sidhu SS, Koide S. Phage display for engineering and analyzing protein interaction interfaces. Current Opinion in Structural Biology. 17: 481-7. PMID 17870470 DOI: 10.1016/J.Sbi.2007.08.007  1
2007 Fellouse FA, Esaki K, Birtalan S, Raptis D, Cancasci VJ, Koide A, Jhurani P, Vasser M, Wiesmann C, Kossiakoff AA, Koide S, Sidhu SS. High-throughput generation of synthetic antibodies from highly functional minimalist phage-displayed libraries. Journal of Molecular Biology. 373: 924-40. PMID 17825836 DOI: 10.1016/J.Jmb.2007.08.005  1
2007 Koide S, Kikuyama M. Hepatobiliary and pancreatic: Isolated accessory pancreatic duct Journal of Gastroenterology and Hepatology (Australia). 22: 954. PMID 17565652 DOI: 10.1111/j.1440-1746.2007.04978.x  1
2007 Koide A, Gilbreth RN, Esaki K, Tereshko V, Koide S. High-affinity single-domain binding proteins with a binary-code interface. Proceedings of the National Academy of Sciences of the United States of America. 104: 6632-7. PMID 17420456 DOI: 10.1073/Pnas.0700149104  1
2007 Yan S, Gawlak G, Makabe K, Tereshko V, Koide A, Koide S. Hydrophobic surface burial is the major stability determinant of a flat, single-layer beta-sheet. Journal of Molecular Biology. 368: 230-43. PMID 17335845 DOI: 10.1016/J.Jmb.2007.02.003  1
2007 Koide A, Zhao C, Naganuma M, Abrams J, Deighton-Collins S, Skafar DF, Koide S. Identification of regions within the F domain of the human estrogen receptor alpha that are important for modulating transactivation and protein-protein interactions. Molecular Endocrinology (Baltimore, Md.). 21: 829-42. PMID 17185393 DOI: 10.1210/Me.2006-0203  1
2007 Koide A, Koide S. Monobodies: antibody mimics based on the scaffold of the fibronectin type III domain. Methods in Molecular Biology (Clifton, N.J.). 352: 95-109. PMID 17041261 DOI: 10.1385/1-59745-187-8:95  1
2007 Koide S, Kato M. 3-D human navigation system with consideration of neighboring space information Conference Proceedings - Ieee International Conference On Systems, Man and Cybernetics. 2: 1693-1698. DOI: 10.1109/ICSMC.2006.384963  1
2007 Koide S, Shi J. Microbial and quality evaluation of green peppers stored in biodegradable film packaging Food Control. 18: 1121-1125. DOI: 10.1016/j.foodcont.2006.07.013  1
2007 Koide S, Nonami T. Disinfecting efficacy of a plastic container covered with photocatalyst for postharvest Food Control. 18: 1-4. DOI: 10.1016/j.foodcont.2005.08.001  1
2007 Koide S. Dynamics of plasma around black hole and the relativistic jet formation - Power of GRMHD simulations - Power o Proceedings of the 17th Workshop On General Relativity and Gravitation in Japan, Jgrg 2007. 75-79.  1
2007 Koide S, Takeda H. Formulation of hierarchical task network service (de)composition Ceur Workshop Proceedings. 243: 107-121.  1
2007 Lima JBM, Koide S. Flood flow water quality analysis using low-cost samplers in small rivers Iahs-Aish Publication. 213-216.  1
2006 Makabe K, McElheny D, Tereshko V, Hilyard A, Gawlak G, Yan S, Koide A, Koide S. Atomic structures of peptide self-assembly mimics. Proceedings of the National Academy of Sciences of the United States of America. 103: 17753-8. PMID 17093048 DOI: 10.1073/Pnas.0606690103  1
2006 Makabe K, Tereshko V, Gawlak G, Yan S, Koide S. Atomic-resolution crystal structure of Borrelia burgdorferi outer surface protein A via surface engineering. Protein Science : a Publication of the Protein Society. 15: 1907-14. PMID 16823038 DOI: 10.1110/Ps.062246706  1
2006 Clark MC, McElheny D, Wojcik J, Kurutz J, Rosner MR, Koide S. NMR assignment of rat Raf kinase inhibitor protein. Journal of Biomolecular Nmr. 36: 4. PMID 16456706 DOI: 10.1007/S10858-005-4424-Y  1
2006 Skafar DF, Koide S. Understanding the human estrogen receptor-alpha using targeted mutagenesis. Molecular and Cellular Endocrinology. 246: 83-90. PMID 16442702 DOI: 10.1016/J.Mce.2005.12.015  1
2006 Huang J, Koide A, Nettle KW, Greene GL, Koide S. Conformation-specific affinity purification of proteins using engineered binding proteins: Application to the estrogen receptor Protein Expression and Purification. 47: 348-354. PMID 16325424 DOI: 10.1016/J.Pep.2005.10.021  1
2006 Shiga K, Koide S, Sekiguchi H, Ikai A. 1P561 Forced Unfolding of OspA by Atomic Force Microscopy(26. Single molecule biophysics,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006) Seibutsu Butsuri. 46. DOI: 10.2142/Biophys.46.S287_1  1
2006 McElheny D, Clark M, Wojcik J, Kurutz J, Rosner M, Koide S. Backbone/Sidechain assignments for RKIP. Journal of Back and Musculoskeletal Rehabilitation. DOI: 10.13018/Bmr6783  1
2006 Koide S, Kato M. "Moudo-Cane"-3-D human navigation system with neighboring space information 13th World Congress On Intelligent Transport Systems and Services 1
2006 Koide S, Takeda H. OWL-full reasoning from an object oriented perspective Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4185: 263-277.  1
2005 Dutta S, Batori V, Koide A, Koide S. High-affinity fragment complementation of a fibronectin type III domain and its application to stability enhancement. Protein Science : a Publication of the Protein Society. 14: 2838-48. PMID 16199661 DOI: 10.1110/Ps.051603005  1
2005 Jha AK, Colubri A, Zaman MH, Koide S, Sosnick TR, Freed KF. Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library. Biochemistry. 44: 9691-702. PMID 16008354 DOI: 10.1021/Bi0474822  1
2005 Koide S, Yang X, Huang X, Dunn JJ, Luft BJ. Structure-based design of a second-generation Lyme disease vaccine based on a C-terminal fragment of Borrelia burgdorferi OspA. Journal of Molecular Biology. 350: 290-9. PMID 15935380 DOI: 10.1016/J.Jmb.2005.04.066  1
2005 Koide SS. Population Council contributions toward the development and advances in reproductive biomedicine and population sciences in Asian nations (1952-2002) Journal of Obstetrics and Gynaecology Research. 31: 2-11. PMID 15669984 DOI: 10.1111/j.1447-0756.2005.00245.x  1
2005 Koide S, Kato M. 3-D human navigation system considering various transition preferences Conference Proceedings - Ieee International Conference On Systems, Man and Cybernetics. 1: 859-864.  1
2004 Murphy WL, Mercurius KO, Koide S, Mrksich M. Substrates for Cell Adhesion Prepared via Active Site-Directed Immobilization of a Protein Domain Langmuir. 20: 1026-1030. PMID 15803670 DOI: 10.1021/La035733M  1
2004 Karatan E, Merguerian M, Han Z, Scholle MD, Koide S, Kay BK. Molecular recognition properties of FN3 monobodies that bind the Src SH3 domain. Chemistry & Biology. 11: 835-44. PMID 15217616 DOI: 10.1016/J.Chembiol.2004.04.009  1
2004 Yan S, Gawlak G, Smith J, Silver L, Koide A, Koide S. Conformational heterogeneity of an equilibrium folding intermediate quantified and mapped by scanning mutagenesis. Journal of Molecular Biology. 338: 811-25. PMID 15099747 DOI: 10.1016/J.Jmb.2004.02.063  1
2004 Koide S. Relativistic outflow magnetically driven by black hole rotation Astrophysical Journal. 606. DOI: 10.1086/420976  1
2004 Koide S, Satta N. Separation Performance of Ion-exchange Membranes for Electrolytes in Drainage Nutrient Solutions subjected to Electrodialysis Biosystems Engineering. 87: 89-97. DOI: 10.1016/j.biosystemseng.2003.09.005  1
2004 Koide S. A report on trials for longer-term simulations of a strongly magnetized plasma near a black hole Journal of the Korean Physical Society. 45: 1762-1766.  1
2004 Koide S. A general relativistic magnetohydrodynamic simulation of outflow formation around rotating black hole Progress of Theoretical Physics Supplement. 155: 148-151.  1
2004 Hiramatsu Y, Koide S. Ontology modeling tool with concept dictionary International Conference On Intelligent User Interfaces, Proceedings Iui. 259-261.  1
2003 Hertadi R, Gruswitz F, Silver L, Koide A, Koide S, Arakawa H, Ikai A. Unfolding mechanics of multiple OspA substructures investigated with single molecule force spectroscopy. Journal of Molecular Biology. 333: 993-1002. PMID 14583195 DOI: 10.1016/J.Jmb.2003.09.010  1
2003 Zhao C, Koide A, Abrams J, Deighton-Collins S, Martinez A, Schwartz JA, Koide S, Skafar DF. Mutation of Leu-536 in human estrogen receptor-alpha alters the coupling between ligand binding, transcription activation, and receptor conformation. The Journal of Biological Chemistry. 278: 27278-86. PMID 12736255 DOI: 10.1074/Jbc.M303840200  1
2003 Richards J, Miller M, Abend J, Koide A, Koide S, Dewhurst S. Engineered fibronectin type III domain with a RGDWXE sequence binds with enhanced affinity and specificity to human alphavbeta3 integrin. Journal of Molecular Biology. 326: 1475-88. PMID 12595259 DOI: 10.1016/S0022-2836(03)00082-2  1
2003 Koide S. Magnetic extraction of black hole rotational energy: Method and results of general relativistic magnetohydrodynamic simulations in Kerr space-time Physical Review D. 68. DOI: 10.1103/PhysRevD.68.104010  1
2002 Batori V, Koide A, Koide S. Exploring the potential of the monobody scaffold: effects of loop elongation on the stability of a fibronectin type III domain. Protein Engineering. 15: 1015-20. PMID 12601141 DOI: 10.1093/Protein/15.12.1015  1
2002 Pawley NH, Koide S, Nicholson LK. Backbone dynamics and thermodynamics of Borrelia outer surface protein A. Journal of Molecular Biology. 324: 991-1002. PMID 12470954 DOI: 10.1016/S0022-2836(02)01146-4  1
2002 Nakagawa T, Shimizu H, Link K, Koide A, Koide S, Tamura A. Calorimetric dissection of thermal unfolding of OspA, a predominantly beta-sheet protein containing a single-layer beta-sheet. Journal of Molecular Biology. 323: 751-62. PMID 12419262 DOI: 10.1016/S0022-2836(02)00974-9  1
2002 Yan S, Kennedy SD, Koide S. Thermodynamic and kinetic exploration of the energy landscape of Borrelia burgdorferi OspA by native-state hydrogen exchange. Journal of Molecular Biology. 323: 363-75. PMID 12381326 DOI: 10.1016/S0022-2836(02)00882-3  1
2002 Koide A, Abbatiello S, Rothgery L, Koide S. Probing protein conformational changes in living cells by using designer binding proteins: Application to the estrogen receptor Proceedings of the National Academy of Sciences of the United States of America. 99: 1253-1258. PMID 11818562 DOI: 10.1073/Pnas.032665299  1
2002 Koide S, Kambe S. Formation of Bi2Sr2Ca1-xYxCu2Oy thin film grown by excimer laser ablation technique Physica C: Superconductivity and Its Applications. 378: 1260-1264. DOI: 10.1016/S0921-4534(02)01746-X  1
2001 Ohnishi S, Koide A, Koide S. The roles of turn formation and cross-strand interactions in fibrillization of peptides derived from the OspA single-layer β-sheet Protein Science. 10: 2083-2092. PMID 11567099 DOI: 10.1110/Ps.15901  1
2001 Kamada M, Takikawa M, Maegawa M, Yamamoto S, Yamano S, Irahara M, Aono T, Futaki S, Ohmoto Y, Koide S. Specific cytotoxicity of antibody to YAL-198, a sperm antigen peptide, to murine zygote. Archives of Andrology. 47: 89-96. PMID 11554689 DOI: 10.1080/014850101316901271  0.01
2001 Koide A, Jordan MR, Horner SR, Batori V, Koide S. Stabilization of a fibronectin type III domain by the removal of unfavorable electrostatic interactions on the protein surface. Biochemistry. 40: 10326-33. PMID 11513611 DOI: 10.1021/Bi010916Y  1
2001 Pawley NH, Wang C, Koide S, Nicholson LK. An improved method for distinguishing between anisotropic tumbling and chemical exchange in analysis of 15N relaxation parameters. Journal of Biomolecular Nmr. 20: 149-65. PMID 11495246 DOI: 10.1023/A:1011249816560  1
2001 Fujii H, Koide S. Prevention of antegrade flow into the false lumen in acute aortic dissection [4] Journal of Thoracic and Cardiovascular Surgery. 122: 404-405. PMID 11479527  1
2001 Huang X, Nakagawa T, Tamura A, Link K, Koide A, Koide S. Formation of the single-layer β-sheet of Borrelia burgdorferi OspA in the absence of the C-terminal capping globular domain Journal of Molecular Biology. 308: 367-375. PMID 11327773 DOI: 10.1006/Jmbi.2001.4579  1
2001 Yudt MR, Koide S. Preventing estrogen receptor action with dimer-interface peptides Steroids. 66: 549-558. PMID 11322963 DOI: 10.1016/S0039-128X(00)00224-5  1
2001 Zhang SM, Miao SY, Wang LF, Koide SS. Evidence for the binding of a human sperm component with diaphanous protein. Archives of Andrology. 46: 29-35. PMID 11204614 DOI: 10.1080/01485010150211128  0.01
2001 Koide S. Prediction of separation angles induced by sharp fins with attack angle Aiaa Journal. 39: 2223-2225.  1
2000 Huang P, Miao S, Fan H, Sheng Q, Yan Y, Wang L, Koide SS. Expression and characterization of the human YWK-II gene, encoding a sperm membrane protein related to the alzheimer betaA4-amyloid precursorprotein. Molecular Human Reproduction. 6: 1069-78. PMID 11101689 DOI: 10.1093/molehr/6.12.1069  0.01
2000 Ohnishi S, Koide S. Proteins without a hydrophobic core: structure and stability Tanpakushitsu Kakusan Koso. Protein, Nucleic Acid, Enzyme. 45: 2502-2510. PMID 11086410  1
2000 Koide SS. Hideyo Noguchi's last stand: the Yellow Fever Commission in Accra, Africa (1927-8) Journal of Medical Biography. 8: 97-101. PMID 10994056  1
2000 Ohnishi S, Koide A, Koide S. Solution conformation and amyloid-like fibril formation of a polar peptide derived from a β-hairpin in the OspA single-layer β-sheet Journal of Molecular Biology. 301: 477-489. PMID 10926522 DOI: 10.1006/Jmbi.2000.3980  1
2000 Koide S, Huang X, Link K, Koide A, Bu Z, Engelman DM. Design of single-layer beta-sheets without a hydrophobic core. Nature. 403: 456-60. PMID 10667801 DOI: 10.1038/35000255  1
1999 Huang X, Link K, Koide A, Dunn JJ, Luft BJ, Koide S. 1H, 13C, and 15N NMR backbone assignments of 37 kDa surface antigen OspC from Borrelia burgdorferi. Journal of Biomolecular Nmr. 14: 283-284. PMID 10481278 DOI: 10.1023/A:1008398527355  1
1999 Nakamura S, Misumi I, Koide S. Cholesterol embolism as a complication of aortic dissection Circulation. 100. PMID 10477543  1
1999 Koide S, Bu Z, Risal D, Pham TN, Nakagawa T, Tamura A, Engelman DM. Multistep denaturation of Borrelia burgdorferi OspA, a protein containing a single-layer beta-sheet. Biochemistry. 38: 4757-67. PMID 10200164 DOI: 10.1021/Bi982443+  1
1999 Nakagawa T, Tamura A, Akasaka K, Koide S, Huang X, Link K, Koide A. Multistep denaturation of Outer surface protein A (OspA) Seibutsu Butsuri. 39. DOI: 10.2142/Biophys.39.S163_1  1
1999 Koide S, Yokoyama K. Electrochemical characterization of an enzyme electrode based on a ferrocene-containing redox polymer Journal of Electroanalytical Chemistry. 468: 193-201. DOI: 10.1016/S0022-0728(99)00174-6  1
1998 Bu Z, Koide S, Engelman DM. A solution SAXS study of Borrelia burgdorferi OspA, a protein containing a single-layer beta-sheet. Protein Science : a Publication of the Protein Society. 7: 2681-3. PMID 9865964 DOI: 10.1002/Pro.5560071223  1
1998 Koide A, Bailey CW, Huang X, Koide S. The fibronectin type III domain as a scaffold for novel binding proteins Journal of Molecular Biology. 284: 1141-1151. PMID 9837732 DOI: 10.1006/Jmbi.1998.2238  1
1998 Koide SS. Mifepristone: Auxiliary therapeutic use in cancer and related disorders Journal of Reproductive Medicine For the Obstetrician and Gynecologist. 43: 551-560. PMID 9693404  1
1998 Pham TN, Koide S. NMR studies of Borrelia burgdorferi OspA, a 28 kDa protein containing a single-layer β-sheet Journal of Biomolecular Nmr. 11: 407-414. PMID 9691284 DOI: 10.1023/A:1008246908142  1
1998 Pham TN, Koide A, Koide S. A stable single-layer β-sheet without a hydrophobic core Nature Structural Biology. 5: 115-119. PMID 9461076 DOI: 10.1038/Nsb0298-115  1
1998 Koide SS. Chitin-chitosan: Properties, benefits and risks Nutrition Research. 18: 1091-1101. DOI: 10.1016/S0271-5317(98)00091-8  1
1997 Negishi H, Koide SS. Prevention and termination of pregnancy in rats by cabergoline, a dopamine agonist Journal of Reproduction and Fertility. 109: 103-107. PMID 9068420  1
1997 Koide S. A two-dimensional simulation of a relativistic jet bent by an oblique magnetic field Astrophysical Journal. 478: 66-69. DOI: 10.1086/303797  1
1997 Koide S, Bailev CW, Koide A. Directed evolution of fibronectin type iii domain to novel ligand binding proteins Faseb Journal. 11.  1
1996 Negishi H, Koide SS. Estrus stage-specific proteinase in uterine fluid of the rat Endocrine Research. 22: 319-331. PMID 8875143  1
1996 Koide S. Correlation of shock angles caused by flat delta wings Aiaa Journal. 34: 1956-1958.  1
1996 Juneja R, Koide SS. Biochemical pathways involved in serotonin-regulated Spisula oocyte maturation and fertilization Invertebrate Reproduction and Development. 30: 47-53.  1
1995 Koide S, Nishikawa KI. Alpha effect and hydrodynamical helicity of anisotropic turbulence in reversed field pinch Journal of the Physical Society of Japan. 64: 4684-4692.  1
1994 Koide S, Sakai JI. Formation of fast magnetosonic shock waves during a two-current-loop collision in solar flares Solar Physics. 151: 137-145. DOI: 10.1007/BF00654087  1
1993 Fujii S, Tsukamura T, Koide S. Serial echocardiographic observation in a case of tuberculous pericarditis with various cardiac findings Japanese Journal of Medical Ultrasonics. 20: 303-308.  1
1992 Sakai JI, Koide S. A theory of filament eruptions before the impulsive phase of solar flares Solar Physics. 137: 293-306. DOI: 10.1007/BF00161851  1
1992 Sakai Ji, Koide S. Classification of magnetic reconnection during two current-loop coalescence Solar Physics. 142: 399-402. DOI: 10.1007/BF00151463  1
1992 Koide S, Wheater HS. Subsurface flow simulation of a small plot at Loch Chon, Scotland Hydrological Processes. 6: 299-326.  1
1991 Kadam AL, Koide SS. A follicular fluid factor inhibiting xenopus oocyte maturation Endocrine Research. 17: 343-355. PMID 1811985 DOI: 10.1080/07435809109106812  1
1991 Koide S, Iwata S, Matsuzawa H, Ohta T. Crystallization of allosteric L-lactate dehydrogenase from Thermus caldophilus and preliminary crystallographic data. Journal of Biochemistry. 109: 6-7. DOI: 10.1093/Oxfordjournals.Jbchem.A123352  0.01
1991 Furuya N, Koide S. Electroreduction of carbon dioxide by metal phthalocyanines Electrochimica Acta. 36: 1309-1313. DOI: 10.1016/0013-4686(91)80010-6  1
1990 Kadam AL, Koide SS. Identification of hypoxanthine in bovine follicular fluid Journal of Pharmaceutical Sciences. 79: 1077-1082. PMID 2079654 DOI: 10.1002/jps.2600791208  1
1990 Haneji T, Koide SS. Identification of the sperm antigen interacting with antibodies in serum from an infertile woman Andrologia. 22: 473-477. PMID 2073057  1
1990 Kadam AL, Kadam PA, Koide SS. Calcium requirement for 5-hydroxytryptamine-indueed maturation of spisula oocytes Invertebrate Reproduction and Development. 18: 165-168. DOI: 10.1080/07924259.1990.9672139  1
1990 Kadam AL, Koide SS. Stimulation of spisula sperm motility by 5-hydroxytryptamine analogs Invertebrate Reproduction and Development. 17: 33-37. DOI: 10.1080/07924259.1990.9672085  1
1990 Furuya N, Koide S. Hydrogen adsorption on iridium single-crystal surfaces Surface Science. 226: 221-225. DOI: 10.1016/0039-6028(90)90487-S  1
1990 Koide S. 3-dimensional simulation of dynamo effect of reversed field pinch Journal of the Physical Society of Japan. 59: 3952-3961.  1
1990 Haneji T, Koide SS. Phosphorylation of a 30,000 dalton protein during meiotic maturation in Spisula oocytes Biochemistry International. 21: 313-319.  1
1990 Kadam AL, Koide SS. Inhibition of serotonin-induced oocyte maturation by a Spisula factor Journal of Experimental Zoology. 255: 239-243.  1
1989 Haneji T, Koide SS. Transblot identification of biotin-containing proteins in rat liver Analytical Biochemistry. 177: 57-61. PMID 2742154 DOI: 10.1016/0003-2697(89)90013-4  1
1989 Haneji T, Koide SS. Protein phosphorylation during 1-methyladenine-induced maturation of Asterias oocytes Experimental Cell Research. 182: 664-667. PMID 2721597 DOI: 10.1016/0014-4827(89)90269-3  1
1989 Kadam AL, Koide SS. Serotonin analogs and spisula oocyte maturation Invertebrate Reproduction and Development. 15: 225-227. DOI: 10.1080/07924259.1989.9672047  1
1989 Furuya N, Koide S. Hydrogen adsorption on platinum single-crystal surfaces Surface Science. 220: 18-28. DOI: 10.1016/0039-6028(89)90460-3  1
1988 Haneji T, Koide SS. Identification of cell types in sertoli cell-enriched cultures by immunocytochemistry and DNA-specific fluorochrome Hoechst 33342 Histochemistry. 89: 57-61. PMID 3366665 DOI: 10.1007/BF00496585  1
1988 Koide S, Steinman RM. Induction of interleukin 1α mRNA during the antigen-dependent interaction of sensitized T lymphoblasts with macrophages Journal of Experimental Medicine. 168: 409-416. PMID 2969406 DOI: 10.1084/Jem.168.1.409  1
1988 Hirai S, Kishimoto T, Kadam AL, Kanatani H, Koide SS. Induction of spawning and oocyte maturation by 5-hydroxytryptamine in the surf clam Journal of Experimental Zoology. 245: 318-321.  1
1987 Koide S, Steinman RM. Induction of murine interleukin 1: Stimuli and responsive primary cells Proceedings of the National Academy of Sciences of the United States of America. 84: 3802-3806. PMID 3495797 DOI: 10.1073/Pnas.84.11.3802  1
1987 Haneji T, Koide SS. The antibody from an infertile woman that induces sperm agglutination interacts with rat testicular cells and sperm Biology of Reproduction. 37: 675-683. PMID 3315018  1
1987 Haneji T, Koide SS. Identification of antigen in rat spermatogenic cells interacting with an anti-human sperm monoclonal antibody Biology of Reproduction. 37: 467-477. PMID 3315015  1
1987 Sato E, Koide SS. Biochemical transmitters regulating the arrest and resumption of meiosis in oocytes International Review of Cytology. 106: 1-33. PMID 3034816  1
1987 Sato E, Koide SS. Follicular fluid constituents influencing spontaneous maturation of cultured mouse oocytes Endocrine Research. 13: 399-405. PMID 2834191 DOI: 10.3109/07435808709035465  1
1985 Deshpande AK, Koide SS. In vitro induction of Xenopus oocyte maturation by 4-pregnene-17α,20β-diol-3-one General and Comparative Endocrinology. 57: 130-134. PMID 3882519 DOI: 10.1016/0016-6480(85)90209-6  1
1985 Koide S, Inamura S, Kanabuchi K. Extra-anatomic bypass with expanded PTFE graft for ischemic lower extremities Japanese Journal of Artificial Organs. 14: 975-979.  1
1984 Sato E, Koide SS. A factor from bovine granulosa cells preventing oocyte maturation Differentiation. 26: 59-62. PMID 6714545  1
1984 Sato E, Koide SS. Forskolin and mouse oocyte maturation in vitro Journal of Experimental Zoology. 230: 125-129. PMID 6427389  1
1984 Koide S, Kanabuchi K, Inamura S. Bypass surgery with Gore-Tex grafts for atherosclerosis obliterans of the lower extremities, with continuous long-time warfarin therapy Japanese Journal of Artificial Organs. 13: 417-420.  1
1983 Matsuo N, Koide SS. DNA interference with radioimmunoassay procedures Clinical Chemistry. 29: 1912-1915. PMID 6414736  1
1983 Godeau F, Koide SS. Xenopus mono(adenosine diphosphate ribosyl) transferase: purification, assay, and properties Princess Takamatsu Symposia. 13: 111-118. PMID 6317632  1
1983 Koide S, Inamura S, Kanabuchi K. Below-knee bypass using Gore-Tex reinforced vascular grafts Japanese Journal of Artificial Organs. 12: 188-190.  1
1982 Deshpande AK, Koide SS. In vitro induction of germinal vesicle breakdown in Xenopus laevis oocytes by melittin Differentiation. 21: 127-132. PMID 7084570  1
1982 Momii A, Koide SS. Adenosine diphosphate-ribosyltransferase activity in permeabilized mouse testicular cells Archives of Biochemistry and Biophysics. 214: 628-633. PMID 6284033 DOI: 10.1016/0003-9861(82)90068-6  1
1982 Momii A, Koide SS. RNA Synthesis and Poly(adenosine Diphosphoribosyl) Synthetase Activity in Developing Mouse Testis Archives of Andrology. 8: 277-283. PMID 6180689 DOI: 10.3109/01485018208990210  1
1982 Adeyemo O, Koide SS. 22Na+ and 86Rb+ fluxes in spermatozoa and oocytes of Arbacia punctulata Gamete Research. 6: 135-143.  1
1981 Koide SS, Maruo T. Bacterial factor with gonadotropin activity Recombinant Dna Technical Bulletin. 4: 5-10. PMID 7255755  1
1980 Maruo T, Koide SS. Cell-free synthesis of α and β subunits of human chorionic gonadotrophin with polyribosomes from early placenta Acta Endocrinologica. 95: 90-96. PMID 6161507  1
1979 Segal SJ, Koide SS. Molecular pharmacology of estrogens Pharmacology and Therapeutics. 4: 183-220. PMID 88743 DOI: 10.1016/0163-7258(79)90019-6  1
1978 Omatu S, Koide S, Soeda T. Optimal Sensor Location Problem for a Linear Distributed Parameter System Ieee Transactions On Automatic Control. 23: 665-673. DOI: 10.1109/TAC.1978.1101826  1
1978 Nishinari K, Koide S. ON THE DIFFERENCE BETWEEN DIELECTRIC AND PIEZOELECTRIC RELAXATION J Phys (Paris). 39: 771-775.  1
1978 Yamazaki S, Koide S, Kawada S. A case of catamenial pneumothorax with endometriosis of the diaphragma Japanese Journal of Thoracic Diseases. 16: 59-63.  1
1977 Koide S. Coarctation of the aorta, associated with an intercostal aneurysm. A successfully repaired case (Japanese) Japanese Journal of Thoracic Surgery. 30: 101-106. PMID 916410  1
1977 Burzio LO, Koide SS. Stimulation of poly(adenosine diphosphate ribose) synthase activity of Xenopus germinal vesicle by progesterone. Annals of the New York Academy of Sciences. 286: 398-407. PMID 214004  1
1976 Koide S. Recurrent thrombosis on the Bjork Shiley mitral valve prostheses. A successfully replaced case on both occasions (Japanese) Journal of the Japanese Association For Thoracic Surgery. 24: 274-282. PMID 944744  1
1976 Sueoka O, Koide S. Positron mobility in diamond Journal of the Physical Society of Japan. 41: 116-121.  1
1976 Burzio LO, Koide SS. Isolation and characterization of Xenopus laevis oocyte nucleus Archivos De Biologia Y Medicina Experimentales. 10: 22-27.  1
1975 Tsong YY, Koide SS. Effect of Estradiol on the Early Incorporation of [3H]Thymidine into Uterine Dna of Immature Mouse Endocrine Research Communications. 2: 571-586. PMID 1222725 DOI: 10.1080/07435807509050680  1
1974 Ashitaka Y, Koide SS. Interaction of human chorionic gonadotropin with rat gonads Fertility and Sterility. 25: 177-184. PMID 4811086  1
1974 Tsong YY, Koide SS. A study on the stability of an estrogem-protein conjugate in vivo and under in vitro conditions Steroids. 24: 825-837. PMID 4374780 DOI: 10.1016/0039-128X(74)90075-0  1
1973 Tsong YY, Koide SS. Isolation and characterization of cortisol metabolites from liver of adrenalectomized rats Journal of Steroid Biochemistry. 4: 239-248. PMID 4748559 DOI: 10.1016/0022-4731(73)90047-2  1
1973 Yoshihara K, Koide SS. Influence of polynucleotides on poly (adenosine diphosphate ribose) synthetase activity of rat liver Febs Letters. 30: 261-264. PMID 4700747 DOI: 10.1016/0014-5793(73)80665-9  1
1973 Burzio L, Koide SS. Activation of the template activity of isolated rat liver nuclei for DNA synthesis and its inhibition by NAD. Biochemical and Biophysical Research Communications. 53: 572-9. PMID 4352070 DOI: 10.1016/0006-291X(73)90700-6  1
1973 Yoshihara K, Koide SS. Release of DNA polymerase from rat liver chromatin on incubation with NAD Febs Letters. 35: 262-264. PMID 4147598 DOI: 10.1016/0014-5793(73)80300-X  1
1973 Ishikawa S, Koide S. A model for the transfer of magnetic excitons between antiparallel spin sites Journal of the Physical Society of Japan. 34: 74-78.  1
1973 Ozawa K, Koide S. A calculation of multi-magnon side-band Journal of the Physical Society of Japan. 35: 754-759.  1
1973 Koide SS, Yoshihara K. Purification and characteristics of poly(adenosine diphosphate ribose) polymerase of rat liver Biochemical Society Transactions. 1: 644-648.  1
1972 Burzio L, Koide SS. In vitro effect of NAD on DNa synthesis in isolated nuclei from regenerating rat liver and novikoff hepatoma. Febs Letters. 20: 29-32. PMID 11946374 DOI: 10.1016/0014-5793(72)80009-7  1
1972 Koide SS. Ovarian hemorrhages induced in immature mice with human placental gonadotropin Experientia. 28: 199-200. PMID 5020358 DOI: 10.1007/BF01935758  1
1971 Miura S, Koide SS. Effect of Thyroxine on RNA Synthesis of Rat Uterus Proceedings of the Society For Experimental Biology and Medicine. 136: 487-490. PMID 5544483 DOI: 10.3181/00379727-136-35294  1
1971 Burzio L, Koide SS. Mode of inhibition of DNA synthesis induced by adenosine diphosphoribosylation of nuclear protein. Biochemical and Biophysical Research Communications. 42: 1185-90. PMID 4323848 DOI: 10.1016/0006-291X(71)90031-3  1
1971 Konishi G, Koide SS. Stimulation of RNA polymerase activity by histones, polyamino acids, and polypeptide hormones Experientia. 27: 262-264. PMID 4323017 DOI: 10.1007/BF02138134  1
1970 Miura S, Koide SS. Effect of Insulin and Growth Hormone on Rat Uterine RNA Synthesis (34586) Proceedings of the Society For Experimental Biology and Medicine. 133: 882-885. PMID 5435580 DOI: 10.3181/00379727-133-34586  1
1970 Burzio L, Koide SS. A functional role of polyADPR in DNA synthesis. Biochemical and Biophysical Research Communications. 40: 1013-20. PMID 4323263 DOI: 10.1016/0006-291X(70)90894-6  1
1970 Uematsu Y, Koide S. Piezoelectric Properties of Ferroelectric K3Li2(TaxNb1-x)5O15 Single Crystals Japanese Journal of Applied Physics. 9: 336-337. DOI: 10.1143/JJAP.9.336  1
1969 Ohtsuka E, Koide SS. In vitro stimulation of RNA synthesis in isolated rat liver nuclei by glucocorticoids Biochemical and Biophysical Research Communications. 35: 648-652. PMID 5794083  1
1969 Parr M, Koide SS. Cortisol and melting of human placental DNA Endocrinology. 84: 683-685. PMID 5773164  1
1969 Koide SS. Isolation of gonadotropin from human term placenta Proceedings of the Society For Experimental Biology and Medicine. 132: 1137-1139. PMID 5360992  1
1969 Koide SS. Hormones and gene transcription New York State Journal of Medicine. 69: 542-547. PMID 4888586  1
1969 Ohtsuka E, Koide SS. Incorporation of steroids into human, dog, and duck erythrocytes General and Comparative Endocrinology. 12: 598-603. PMID 4238930  1
1969 Koide SS. [32] 3α-Hydroxysteroid dehydrogenase of rat liver Methods in Enzymology. 15: 651-656. DOI: 10.1016/S0076-6879(69)15034-X  1
1968 Botte V, Koide SS. Effect of actinomycin D on the induction of uterine alkaline phosphatase of growing rats by 17 β-estradiol Experientia. 24: 1024. PMID 5711865 DOI: 10.1007/BF02138724  1
1968 Ohtsuka E, Koide SS. Binding of cortisol and 21-dehydrocortisol with transcortin Endocrinology. 83: 999-1003. PMID 5685579  1
1968 Ohtsuka E, Koide SS. Interconversion of cortisol and cortisone in the Macaca mulatta Experientia. 24: 1116-1117. PMID 4976419 DOI: 10.1007/BF02147793  1
1968 Sunaga K, Koide SS. Identification of a prednisolone derivative interacting with calf thymus histones Journal of Pharmaceutical Sciences. 57: 2116-2119. PMID 4974347  1
1968 Botte V, Koide SS. Hydrolysis of steroid phosphates by plasma phosphatases Endocrinology. 82: 1062-1063. PMID 4231584  1
1968 Botte V, Koide SS. Enzymic hydrolysis of steroid phosphates Biochimica Et Biophysica Acta (Bba)/Lipids and Lipid Metabolism. 152: 396-400. PMID 4230231  1
1968 Takei H, Koide S. Epitaxial growth of VO single crystals and their electrical properties Journal of the Physical Society of Japan. 24: 1394.  1
1967 Sunaga K, Koide SS. Interaction of calf thymus histones and DNA with steroids Steroids. 9: 451-456. PMID 6041714  1
1967 Sunaga K, Koide SS. Structural specificity of the steroids interacting with calf thymus histones Biochemical and Biophysical Research Communications. 26: 342-348. PMID 6034359  1
1967 Koide S, Takei H. Epitaxial growth of VO2 single crystals and their anisotropic properties in electrical resistivities Journal of the Physical Society of Japan. 22: 946-947.  1
1966 Koide SS, Torres MT. Isolation of 3-oxosteroid Δ4-Δ5 -isomerase of human term placenta Bba - Enzymology and Biological Oxidation. 122: 151-153. PMID 5968170  1
1966 Doman E, Koide SS. Analysis of 3α- and 3β-hydroxysteroid oxidoreductases of rat liver by disc electrophoresis Bba - Enzymology and Biological Oxidation. 128: 209-211. PMID 4382042  1
1966 Mitsudo SM, Koide SS. Histochemical demonstration of the hydroxysteroid oxidoreductases in the umbilical cord and membranes of human term and immature placenta Endocrinology. 78: 333-338. PMID 4379315  1
1966 Takei H, Koide S. Growth and electrical properties of vanadium-oxide single crystals by oxychrolide decomposition method Journal of the Physical Society of Japan. 21: 1010.  1
1966 Kasami A, Koide S. Anisotropy of DC and high-frequency resistivity of hexagonal ferrite Zn2Y Journal of the Physical Society of Japan. 21: 552.  1
1965 KOIDE SS, MITSUDO SM. HISTOCHEMICAL STUDY OF 3-BETA- AND 17-BETA-HYDROXYSTEROID DEHYDROGENASES IN HUMAN TERM PLACENTA Endocrinology. 76: 403-407. PMID 14263277  1
1965 Koide SS, Torres MT. Distribution of 3-beta-hydroxysteroid dehydrogenase and delta-5-3-oxosteroid isomerase in homogenate fractions of human term placenta Biochimica Et Biophysica Acta. 105: 115-120. PMID 5849107  1
1965 Koide SS. Further study on the purification of 3-alpha-hydroxysteroid dehydrogenase of rat liver Biochimica Et Biophysica Acta. 110: 189-194. PMID 4379502  1
1965 Koide SS. Separation of 3-α- and 3-β-hydroxysterold oxidoreductases from the soluble fraction of rat liver by gel filtration Steroids. 6: 123-128. PMID 4287531  1
1965 Koide S. Electrical properties of LixNi(1-x)O single crystals Journal of the Physical Society of Japan. 20: 123-132.  1
1964 Koide SS, Torres MT. The effect of various sulfites and glycerol on the heat inactivation of 3α-hydroxysteroid dehydrogenase of rat liver Bba - Enzymological Subjects. 89: 150-152. PMID 14212991  1
1964 Koide S, Peter M. Interaction between magnetic ions and conduction electrons Reviews of Modern Physics. 36: 160-162. DOI: 10.1103/RevModPhys.36.160  1
1964 Mizuno Y, Koide S. Vibrationally induced electronic transitions in crystals of magnetic compounds - II. Spin-dependent infrared absorption band in NiO Physik Der Kondensierten Materie. 2: 166-179. DOI: 10.1007/BF02422874  1
1964 Koide SS. Dissociation of the dehydrogenating and transhydrogenating activities of the 3α-hydroxysteroid dehydrogenase of rat liver by β-mercaptoethanol and testosterone Steroids. 3: 85-93.  1
1964 Duval E, Koide S. Interaction entre spins nucleaire a grande distance Physics Letters. 8: 314-315.  1
1964 Koide S, Duval E. Long-range spin-spin interaction between nuclei in the saturated compounds The Journal of Chemical Physics. 41: 315-320.  1
1963 Koide SS. Purification of 3α-Hydroxysteroid dehydrogenase obtained from the soluble fraction of rat liver Archives of Biochemistry and Biophysics. 101: 278-285. PMID 14034252  1
1963 Koide S. Electrical properties of Ni(1-x)LixO single crystals Journal of the Physical Society of Japan. 18: 1699-1700.  1
1963 Koide S, Takei H. Electrical properties of Ni(1-x)O system Journal of the Physical Society of Japan. 18: 319-320.  1
1962 Koide SS. Inhibition of 3α-hydroxysteroid-mediated transhydrogenase of rat liver by various quinones and flavonoids Bba - Biochimica Et Biophysica Acta. 59: 708-710. PMID 14457865  1
1962 Koide S, Chen C, Freeman S. Inhibition of steroid-mediated transhydrogenation and dehydrogenation by Δ4-3-oxosteroids Bba - Biochimica Et Biophysica Acta. 63: 186-193. PMID 14034251  1
1960 Koide S. Über die berechnung von franck-condon-integralen Zeitschrift Fur Naturforschung - Section a Journal of Physical Sciences. 15: 123-128. DOI: 10.1515/zna-1960-0206  1
1959 KOIDE SS. A study of carbamyl phosphate degradation in blood of normal subjects and cirrhotic patients The Proceedings of the Institute of Medicine of Chicago. 22: 337-346. PMID 14410582  1
1958 Kasuya T, Koide S. A theory of impurity conduction. II Journal of the Physical Society of Japan. 13: 1287-1297.  1
1956 KOIDE SS. Myiasis from Oestrus ovis; report of three cases Hawaii Medical Journal. 15: 460-461. PMID 13357099  1
1956 Koide S. A lattice theory of quantum fluids Journal of the Physical Society of Japan. 11: 7-14.  1
1954 Ishiguro E, Koide S. Magnetic properties of the hydrogen molecules Physical Review. 94: 350-357. DOI: 10.1103/PhysRev.94.350  1
1954 Yokota M, Koide S. The exchange effects on the absorption spectrum by the paramagnetic crystal with anisotropic g-factors Journal of the Physical Society of Japan. 9: 953-960.  1
1952 Mizushima M, Koide S. On the lifetime of the lower triplet states of benzene The Journal of Chemical Physics. 20: 765-769.  1
1951 KOIDE S, FREEMAN S. Effect of Eck fistula formation on alloxan diabetic dogs The American Journal of Physiology. 167: 193-200. PMID 14885487  1
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