Katherine A. Borkovich - Publications

Biochemistry and Molecular Biology University of California, Riverside, Riverside, CA, United States 
Molecular Biology

60 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Carrillo AJ, Cabrera IE, Spasojevic MJ, Schacht P, Stajich JE, Borkovich KA. Clustering analysis of large-scale phenotypic data in the model filamentous fungus Neurospora crassa. Bmc Genomics. 21: 755. PMID 33138786 DOI: 10.1186/s12864-020-07131-7  0.4
2019 Garud A, Carrillo AJ, Collier LA, Ghosh A, Kim JD, Lopez-Lopez B, Ouyang S, Borkovich KA. Genetic relationships between the RACK1 homolog cpc-2 and heterotrimeric G protein subunit genes in Neurospora crassa. Plos One. 14: e0223334. PMID 31581262 DOI: 10.1371/Journal.Pone.0223334  0.36
2017 Carrillo AJ, Schacht P, Cabrera IE, Blahut J, Prudhomme L, Dietrich S, Bekman T, Mei J, Carrera C, Chen V, Clark I, Fierro G, Ganzen L, Orellana J, Wise S, ... ... Borkovich KA, et al. Functional Profiling of Transcription Factor Genes in Neurospora crassa. G3 (Bethesda, Md.). PMID 28696922 DOI: 10.1534/G3.117.043331  0.4
2016 Tamuli R, Deka R, Borkovich KA. Calcineurin Subunits A and B Interact to Regulate Growth and Asexual and Sexual Development in Neurospora crassa. Plos One. 11: e0151867. PMID 27019426 DOI: 10.1371/Journal.Pone.0151867  1
2015 Cabrera IE, Pacentine IV, Lim A, Guerrero N, Krystofova S, Li L, Michkov AV, Servin JA, Ahrendt SR, Carrillo AJ, Davidson LM, Barsoum AH, Cao J, Castillo R, Chen WC, ... ... Borkovich KA, et al. Global Analysis of Predicted G Protein Coupled Receptor Genes in the Filamentous Fungus, Neurospora crassa. G3 (Bethesda, Md.). PMID 26464358 DOI: 10.1534/G3.115.020974  1
2015 Ouyang S, Beecher CN, Wang K, Larive CK, Borkovich KA. Metabolic Impacts of Using Nitrogen and Copper-Regulated Promoters to Regulate Gene Expression in Neurospora crassa. G3 (Bethesda, Md.). PMID 26194204 DOI: 10.1534/G3.115.020073  1
2014 Ouyang S, Park G, Atamian HS, Han CS, Stajich JE, Kaloshian I, Borkovich KA. MicroRNAs suppress NB domain genes in tomato that confer resistance to Fusarium oxysporum. Plos Pathogens. 10: e1004464. PMID 25330340 DOI: 10.1371/Journal.Ppat.1004464  1
2014 Ghosh A, Servin JA, Park G, Borkovich KA. Global analysis of serine/threonine and tyrosine protein phosphatase catalytic subunit genes in Neurospora crassa reveals interplay between phosphatases and the p38 mitogen-activated protein kinase. G3 (Bethesda, Md.). 4: 349-65. PMID 24347630 DOI: 10.1534/G3.113.008813  1
2013 Eaton CJ, Cabrera IE, Servin JA, Wright SJ, Cox MP, Borkovich KA. Correction: The guanine nucleotide exchange factor RIC8 regulates conidial germination through Gα proteins in neurospora crassa (PLoS ONE) Plos One. 8. DOI: 10.1371/annotation/83a5d99e-3072-4bbf-a41b-08118aa77221  1
2013 Servin JA, Campbell AJ, Borkovich KA. G protein signaling components in filamentous fungal genomes Biocommunication of Fungi. 21-38. DOI: 10.1007/978-94-007-4264-2_2  1
2012 Eaton CJ, Cabrera IE, Servin JA, Wright SJ, Cox MP, Borkovich KA. The guanine nucleotide exchange factor RIC8 regulates conidial germination through Gα proteins in Neurospora crassa. Plos One. 7: e48026. PMID 23118921 DOI: 10.1371/Journal.Pone.0048026  1
2012 Won S, Michkov AV, Krystofova S, Garud AV, Borkovich KA. Genetic and physical interactions between Gα subunits and components of the Gβγ dimer of heterotrimeric G proteins in Neurospora crassa. Eukaryotic Cell. 11: 1239-48. PMID 22903975 DOI: 10.1128/Ec.00151-12  1
2012 Park G, Borkovich KA. Small RNA isolation and library construction for expression profiling of small RNAs from Neurospora and Fusarium using illumina high-throughput deep sequencing. Methods in Molecular Biology (Clifton, N.J.). 883: 155-64. PMID 22589132 DOI: 10.1007/978-1-61779-839-9_12  1
2012 Kim H, Wright SJ, Park G, Ouyang S, Krystofova S, Borkovich KA. Roles for receptors, pheromones, G proteins, and mating type genes during sexual reproduction in Neurospora crassa. Genetics. 190: 1389-404. PMID 22298702 DOI: 10.1534/Genetics.111.136358  1
2011 Park G, Servin JA, Turner GE, Altamirano L, Colot HV, Collopy P, Litvinkova L, Li L, Jones CA, Diala FG, Dunlap JC, Borkovich KA. Global analysis of serine-threonine protein kinase genes in Neurospora crassa. Eukaryotic Cell. 10: 1553-64. PMID 21965514 DOI: 10.1128/Ec.05140-11  1
2011 Wright SJ, Inchausti R, Eaton CJ, Krystofova S, Borkovich KA. RIC8 is a guanine-nucleotide exchange factor for Galpha subunits that regulates growth and development in Neurospora crassa. Genetics. 189: 165-76. PMID 21750256 DOI: 10.1534/Genetics.111.129270  1
2011 Park G, Colot HV, Collopy PD, Krystofova S, Crew C, Ringelberg C, Litvinkova L, Altamirano L, Li L, Curilla S, Wang W, Gorrochotegui-Escalante N, Dunlap JC, Borkovich KA. High-throughput production of gene replacement mutants in Neurospora crassa. Methods in Molecular Biology (Clifton, N.J.). 722: 179-89. PMID 21590421 DOI: 10.1007/978-1-61779-040-9_13  1
2011 Kim JD, Kaiser K, Larive CK, Borkovich KA. Use of 1H nuclear magnetic resonance to measure intracellular metabolite levels during growth and asexual sporulation in Neurospora crassa. Eukaryotic Cell. 10: 820-31. PMID 21460191 DOI: 10.1128/Ec.00231-10  1
2010 Jones CA, Borkovich KA. Analysis of mitogen-activated protein kinase phosphorylation in response to stimulation of histidine kinase signaling pathways in Neurospora. Methods in Enzymology. 471: 319-34. PMID 20946855 DOI: 10.1016/S0076-6879(10)71017-X  1
2010 Collopy PD, Colot HV, Park G, Ringelberg C, Crew CM, Borkovich KA, Dunlap JC. High-throughput construction of gene deletion cassettes for generation of Neurospora crassa knockout strains. Methods in Molecular Biology (Clifton, N.J.). 638: 33-40. PMID 20238259 DOI: 10.1007/978-1-60761-611-5_3  1
2010 Ma LJ, van der Does HC, Borkovich KA, Coleman JJ, Daboussi MJ, Di Pietro A, Dufresne M, Freitag M, Grabherr M, Henrissat B, Houterman PM, Kang S, Shim WB, Woloshuk C, Xie X, et al. Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium. Nature. 464: 367-73. PMID 20237561 DOI: 10.1038/Nature08850  1
2008 Kanetis L, Förster H, Jones CA, Borkovich KA, Adaskaveg JE. Characterization of genetic and biochemical mechanisms of fludioxonil and pyrimethanil resistance in field isolates of Penicillium digitatum. Phytopathology. 98: 205-14. PMID 18943197 DOI: 10.1094/PHYTO-98-2-0205  1
2008 Park G, Pan S, Borkovich KA. Mitogen-activated protein kinase cascade required for regulation of development and secondary metabolism in Neurospora crassa. Eukaryotic Cell. 7: 2113-22. PMID 18849472 DOI: 10.1128/Ec.00466-07  1
2007 Vitalini MW, de Paula RM, Goldsmith CS, Jones CA, Borkovich KA, Bell-Pedersen D. Circadian rhythmicity mediated by temporal regulation of the activity of p38 MAPK. Proceedings of the National Academy of Sciences of the United States of America. 104: 18223-8. PMID 17984065 DOI: 10.1073/Pnas.0704900104  1
2007 Bieszke JA, Li L, Borkovich KA. The fungal opsin gene nop-1 is negatively-regulated by a component of the blue light sensing pathway and influences conidiation-specific gene expression in Neurospora crassa. Current Genetics. 52: 149-57. PMID 17676324 DOI: 10.1007/S00294-007-0148-8  1
2007 Li L, Wright SJ, Krystofova S, Park G, Borkovich KA. Heterotrimeric G protein signaling in filamentous fungi. Annual Review of Microbiology. 61: 423-52. PMID 17506673 DOI: 10.1146/Annurev.Micro.61.080706.093432  1
2007 Jones CA, Greer-Phillips SE, Borkovich KA. The response regulator RRG-1 functions upstream of a mitogen-activated protein kinase pathway impacting asexual development, female fertility, osmotic stress, and fungicide resistance in Neurospora crassa. Molecular Biology of the Cell. 18: 2123-36. PMID 17392518 DOI: 10.1091/Mbc.E06-03-0226  1
2007 Dunlap JC, Borkovich KA, Henn MR, Turner GE, Sachs MS, Glass NL, McCluskey K, Plamann M, Galagan JE, Birren BW, Weiss RL, Townsend JP, Loros JJ, Nelson MA, Lambreghts R, et al. Enabling a community to dissect an organism: overview of the Neurospora functional genomics project. Advances in Genetics. 57: 49-96. PMID 17352902 DOI: 10.1016/S0065-2660(06)57002-6  1
2006 Krystofova S, Borkovich KA. The predicted G-protein-coupled receptor GPR-1 is required for female sexual development in the multicellular fungus Neurospora crassa. Eukaryotic Cell. 5: 1503-16. PMID 16963633 DOI: 10.1128/Ec.00124-06  1
2006 Li L, Borkovich KA. GPR-4 is a predicted G-protein-coupled receptor required for carbon source-dependent asexual growth and development in Neurospora crassa. Eukaryotic Cell. 5: 1287-300. PMID 16896213 DOI: 10.1128/Ec.00109-06  1
2006 Colot HV, Park G, Turner GE, Ringelberg C, Crew CM, Litvinkova L, Weiss RL, Borkovich KA, Dunlap JC. A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors. Proceedings of the National Academy of Sciences of the United States of America. 103: 10352-7. PMID 16801547 DOI: 10.1073/Pnas.0601456103  1
2006 Kim H, Borkovich KA. Pheromones are essential for male fertility and sufficient to direct chemotropic polarized growth of trichogynes during mating in Neurospora crassa. Eukaryotic Cell. 5: 544-54. PMID 16524909 DOI: 10.1128/Ec.5.3.544-554.2006  1
2005 Krystofova S, Borkovich KA. The heterotrimeric G-protein subunits GNG-1 and GNB-1 form a Gbetagamma dimer required for normal female fertility, asexual development, and galpha protein levels in Neurospora crassa. Eukaryotic Cell. 4: 365-78. PMID 15701799 DOI: 10.1128/Ec.4.2.365-378.2005  1
2004 Kim H, Borkovich KA. A pheromone receptor gene, pre-1, is essential for mating type-specific directional growth and fusion of trichogynes and female fertility in Neurospora crassa. Molecular Microbiology. 52: 1781-98. PMID 15186425 DOI: 10.1111/J.1365-2958.2004.04096.X  1
2004 Kays AM, Borkovich KA. Severe impairment of growth and differentiation in a Neurospora crassa mutant lacking all heterotrimeric G alpha proteins. Genetics. 166: 1229-40. PMID 15082543 DOI: 10.1534/genetics.166.3.1229  1
2004 Borkovich KA, Alex LA, Yarden O, Freitag M, Turner GE, Read ND, Seiler S, Bell-Pedersen D, Paietta J, Plesofsky N, Plamann M, Goodrich-Tanrikulu M, Schulte U, Mannhaupt G, Nargang FE, et al. Lessons from the genome sequence of Neurospora crassa: tracing the path from genomic blueprint to multicellular organism. Microbiology and Molecular Biology Reviews : Mmbr. 68: 1-108. PMID 15007097 DOI: 10.1128/Mmbr.68.1.1-108.2004  1
2003 Galagan JE, Calvo SE, Borkovich KA, Selker EU, Read ND, Jaffe D, FitzHugh W, Ma LJ, Smirnov S, Purcell S, Rehman B, Elkins T, Engels R, Wang S, Nielsen CB, et al. The genome sequence of the filamentous fungus Neurospora crassa. Nature. 422: 859-68. PMID 12712197 DOI: 10.1038/Nature01554  1
2002 Ivey FD, Kays AM, Borkovich KA. Shared and independent roles for a Galpha(i) protein and adenylyl cyclase in regulating development and stress responses in Neurospora crassa. Eukaryotic Cell. 1: 634-42. PMID 12456011 DOI: 10.1128/EC.1.4.634-642.2002  1
2002 Yang Q, Poole SI, Borkovich KA. A G-protein beta subunit required for sexual and vegetative development and maintenance of normal G alpha protein levels in Neurospora crassa. Eukaryotic Cell. 1: 378-90. PMID 12455986 DOI: 10.1128/EC.1.3.378-390.2002  1
2000 Kays AM, Rowley PS, Baasiri RA, Borkovich KA. Regulation of conidiation and adenylyl cyclase levels by the Galpha protein GNA-3 in Neurospora crassa. Molecular and Cellular Biology. 20: 7693-705. PMID 11003665 DOI: 10.1128/MCB.20.20.7693-7705.2000  1
2000 Yang Q, Bieszke JA, Borkovich KA. Differential complementation of a Neurospora crassa Gα(i) mutation using mammalian Gα protein genes Molecular and General Genetics. 263: 712-721. PMID 10852494  1
1999 Bieszke JA, Spudich EN, Scott KL, Borkovich KA, Spudich JL. A eukaryotic protein, NOP-1, binds retinal to form an archaeal rhodopsin-like photochemically reactive pigment. Biochemistry. 38: 14138-45. PMID 10571987 DOI: 10.1021/Bi9916170  1
1999 Bieszke JA, Braun EL, Bean LE, Kang S, Natvig DO, Borkovich KA. The nop-1 gene of Neurospora crassa encodes a seven transmembrane helix retinal-binding protein homologous to archaeal rhodopsins. Proceedings of the National Academy of Sciences of the United States of America. 96: 8034-9. PMID 10393943 DOI: 10.1073/Pnas.96.14.8034  1
1999 Ivey FD, Yang Q, Borkovich KA. Positive regulation of adenylyl cyclase activity by a Gα(i) homolog in Neurospora crassa Fungal Genetics and Biology. 26: 48-61. PMID 10072319 DOI: 10.1006/fgbi.1998.1101  1
1999 Yang Q, Borkovich KA. Mutational activation of a Gα(i) causes uncontrolled proliferation of aerial hyphae and increased sensitivity to heat and oxidative stress in Neurospora crassa Genetics. 151: 107-117. PMID 9872952  1
1997 Baasiri RA, Lu X, Rowley PS, Turner GE, Borkovich KA. Overlapping functions for two G protein alpha subunits in Neurospora crassa. Genetics. 147: 137-45. PMID 9286674  1
1996 Ivey FD, Hodge PN, Turner GE, Borkovich KA. The Gα(i) homologue gna-1 controls multiple differentiation pathways in Neurospora crassa Molecular Biology of the Cell. 7: 1283-1297. PMID 8856670 DOI: 10.1091/mbc.7.8.1283  1
1996 Alex LA, Borkovich KA, Simon MI. Hyphal development in Neurospora crassa: Involvement of a two-component histidine kinase Proceedings of the National Academy of Sciences of the United States of America. 93: 3416-3421. PMID 8622950 DOI: 10.1073/Pnas.93.8.3416  1
1993 Turner GE, Borkovich KA. Identification of a G protein α subunit from Neurospora crassa that is a member of the Gi family Journal of Biological Chemistry. 268: 14805-14811. PMID 8325859  1
1992 Sanchez Y, Taulien J, Borkovich KA, Lindquist S. Hsp104 is required for tolerance to many forms of stress Embo Journal. 11: 2357-2364. PMID 1600951  1
1992 Borkovich KA, Alex LA, Simon MI. Attenuation of sensory receptor signaling by covalent modification Proceedings of the National Academy of Sciences of the United States of America. 89: 6756-6760. PMID 1495964 DOI: 10.1073/pnas.89.15.6756  1
1991 Borkovich KA, Simon MI. Coupling of receptor function to phosphate-transfer reactions in bacterial chemotaxis Methods in Enzymology. 200: 205-214. PMID 1956318 DOI: 10.1016/0076-6879(91)00140-R  1
1991 Bourret RB, Borkovich KA, Simon MI. Signal transduction pathways involving protein phosphorylation in prokaryotes Annual Review of Biochemistry. 60: 401-441. PMID 1883200 DOI: 10.1146/Annurev.Bi.60.070191.002153  1
1990 Borkovich KA, Simon MI. The dynamics of protein phosphorylation in bacterial chemotaxis Cell. 63: 1339-1348. PMID 2261645 DOI: 10.1016/0092-8674(90)90429-I  1
1989 Borkovich KA, Farrelly FW, Finkelstein DB, Taulien J, Lindquist S. hsp82 Is an essential protein that is required in higher concentrations for growth of cells at higher temperatures Molecular and Cellular Biology. 9: 3919-3930. PMID 2674684 DOI: 10.1128/Mcb.9.9.3919  1
1989 Borkovich KA, Kaplan N, Hess JF, Simon MI. Transmembrane signal transduction in bacterial chemotaxis involves ligand-dependent activation of phosphate group transfer Proceedings of the National Academy of Sciences of the United States of America. 86: 1208-1212. PMID 2645576 DOI: 10.1073/Pnas.86.4.1208  1
1989 Bourret RB, Hess JF, Borkovich KA, Pakula AA, Simon MI. Protein phosphorylation in chemotaxis and two-component regulatory systems of bacteria Journal of Biological Chemistry. 264: 7085-7088. PMID 2540171  1
1989 Simon MI, Borkovich KA, Bourret RB, Hess JF. Protein phosphorylation in the bacterial chemotaxis system Biochimie. 71: 1013-1019. PMID 2512992 DOI: 10.1016/0300-9084(89)90105-3  1
1987 Borkovich KA, Weiss RL. Purification and characterization of arginase from Neurospora crassa. The Journal of Biological Chemistry. 262: 7081-6. PMID 2953715  1
1987 Borkovich KA, Weiss RL. Relationship between two major immunoreactive forms of arginase in Neurospora crassa. Journal of Bacteriology. 169: 5510-7. PMID 2890621  1
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