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Gregory D. Van Duyne - Publications

Affiliations: 
University of Pennsylvania, Philadelphia, PA, United States 
Area:
Molecular Biology, Medical Biophysics, Biochemistry
Website:
https://www.med.upenn.edu/apps/faculty/index.php/g275/p4591
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40 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Chen YW, Su BY, Van Duyne GD, Fogg P, Fan HF. The influence of coiled-coil motif of serine recombinase toward the directionality regulation. Biophysical Journal. PMID 37974397 DOI: 10.1016/j.bpj.2023.11.009  0.355
2021 Gupta K, Wen Y, Ninan NS, Raimer AC, Sharp R, Spring AM, Sarachan KL, Johnson MC, Van Duyne GD, Matera AG. Assembly of higher-order SMN oligomers is essential for metazoan viability and requires an exposed structural motif present in the YG zipper dimer. Nucleic Acids Research. PMID 34181727 DOI: 10.1093/nar/gkab508  0.714
2017 Gray KM, Kaifer KA, Baillat D, Wen Y, Bonacci TR, Ebert AD, Raimer AC, Spring AM, Have ST, Glascock JJ, Gupta K, Van Duyne GD, Emanuele MJ, Lamond AI, Wagner EJ, et al. Self-oligomerization regulates stability of Survival Motor Neuron (SMN) protein isoforms by sequestering an SCF(Slmb) degron. Molecular Biology of the Cell. PMID 29167380 DOI: 10.1091/Mbc.E17-11-0627  0.473
2017 Gupta K, Sharp R, Yuan JB, Li H, Van Duyne GD. Coiled-coil interactions mediate serine integrase directionality. Nucleic Acids Research. PMID 28549184 DOI: 10.1093/Nar/Gkx474  0.384
2016 Eisemann T, McCauley M, Langelier MF, Gupta K, Roy S, Van Duyne GD, Pascal JM. Tankyrase-1 Ankyrin Repeats Form an Adaptable Binding Platform for Targets of ADP-Ribose Modification. Structure (London, England : 1993). PMID 27594684 DOI: 10.1016/J.Str.2016.07.014  0.364
2016 Weiss MS, Diederichs K, Read RJ, Panjikar S, Van Duyne GD, Matera AG, Fischer U, Grimm C. A critical examination of the recently reported crystal structures of the human SMN protein. Human Molecular Genetics. PMID 27577872 DOI: 10.1093/Hmg/Ddw298  0.351
2016 Laxmikanthan G, Xu C, Brilot AF, Warren D, Steele L, Seah N, Tong W, Grigorieff N, Landy A, Van Duyne GD. Structure of a Holliday junction complex reveals mechanisms governing a highly regulated DNA transaction. Elife. 5. PMID 27223329 DOI: 10.7554/Elife.14313  0.319
2015 Gupta K, Martin R, Sharp R, Sarachan KL, Ninan NS, Van Duyne GD. Oligomeric Properties of Survival Motor Neuron·Gemin2 Complexes. The Journal of Biological Chemistry. PMID 26092730 DOI: 10.1074/Jbc.M115.667279  0.696
2014 Praveen K, Wen Y, Gray KM, Noto JJ, Patlolla AR, Van Duyne GD, Matera AG. SMA-causing missense mutations in survival motor neuron (Smn) display a wide range of phenotypes when modeled in Drosophila. Plos Genetics. 10: e1004489. PMID 25144193 DOI: 10.1371/Journal.Pgen.1004489  0.516
2014 Seah NE, Warren D, Tong W, Laxmikanthan G, Van Duyne GD, Landy A. Nucleoprotein architectures regulating the directionality of viral integration and excision. Proceedings of the National Academy of Sciences of the United States of America. 111: 12372-7. PMID 25114241 DOI: 10.1073/Pnas.1413019111  0.341
2014 Gupta K, Contreras LM, Smith D, Qu G, Huang T, Spruce LA, Seeholzer SH, Belfort M, Van Duyne GD. Quaternary arrangement of an active, native group II intron ribonucleoprotein complex revealed by small-angle X-ray scattering. Nucleic Acids Research. 42: 5347-60. PMID 24567547 DOI: 10.1093/Nar/Gku140  0.315
2014 Rutherford K, Van Duyne GD. The ins and outs of serine integrase site-specific recombination. Current Opinion in Structural Biology. 24: 125-31. PMID 24509164 DOI: 10.1016/j.sbi.2014.01.003  0.331
2013 Van Duyne GD, Rutherford K. Large serine recombinase domain structure and attachment site binding. Critical Reviews in Biochemistry and Molecular Biology. 48: 476-91. PMID 23980849 DOI: 10.3109/10409238.2013.831807  0.315
2012 Martin R, Gupta K, Ninan NS, Perry K, Van Duyne GD. The survival motor neuron protein forms soluble glycine zipper oligomers. Structure (London, England : 1993). 20: 1929-39. PMID 23022347 DOI: 10.1016/J.Str.2012.08.024  0.771
2012 Sarachan KL, Valentine KG, Gupta K, Moorman VR, Gledhill JM, Bernens M, Tommos C, Wand AJ, Van Duyne GD. Solution structure of the core SMN-Gemin2 complex. The Biochemical Journal. 445: 361-70. PMID 22607171 DOI: 10.1042/Bj20120241  0.815
2011 Devarakonda S, Gupta K, Chalmers MJ, Hunt JF, Griffin PR, Van Duyne GD, Spiegelman BM. Disorder-to-order transition underlies the structural basis for the assembly of a transcriptionally active PGC-1α/ERRγ complex. Proceedings of the National Academy of Sciences of the United States of America. 108: 18678-83. PMID 22049338 DOI: 10.1073/Pnas.1113813108  0.342
2011 Huang T, Shaikh TR, Gupta K, Contreras-Martin LM, Grassucci RA, Van Duyne GD, Frank J, Belfort M. The group II intron ribonucleoprotein precursor is a large, loosely packed structure Nucleic Acids Research. 39: 2845-2854. PMID 21131279 DOI: 10.1093/Nar/Gkq1202  0.325
2010 Gibb B, Gupta K, Ghosh K, Sharp R, Chen J, Van Duyne GD. Requirements for catalysis in the Cre recombinase active site. Nucleic Acids Research. 38: 5817-32. PMID 20462863 DOI: 10.1093/Nar/Gkq384  0.717
2010 Gupta K, Diamond T, Hwang Y, Bushman F, Van Duyne GD. Structural properties of HIV integrase. Lens epithelium-derived growth factor oligomers. The Journal of Biological Chemistry. 285: 20303-15. PMID 20406807 DOI: 10.1074/Jbc.M110.114413  0.338
2009 Pesiridis GS, Diamond E, Van Duyne GD. Role of pICLn in methylation of Sm proteins by PRMT5. The Journal of Biological Chemistry. 284: 21347-59. PMID 19520849 DOI: 10.1074/jbc.M109.015578  0.732
2009 Szep S, Park S, Boder ET, Van Duyne GD, Saven JG. Structural coupling between FKBP12 and buried water. Proteins. 74: 603-11. PMID 18704951 DOI: 10.1002/Prot.22176  0.34
2008 Yuan P, Gupta K, Van Duyne GD. Tetrameric structure of a serine integrase catalytic domain. Structure (London, England : 1993). 16: 1275-86. PMID 18682229 DOI: 10.1016/J.Str.2008.04.018  0.371
2007 Ghosh K, Guo F, Van Duyne GD. Synapsis of loxP sites by Cre recombinase. The Journal of Biological Chemistry. 282: 24004-16. PMID 17573343 DOI: 10.1074/Jbc.M703283200  0.463
2005 Ma Y, Dostie J, Dreyfuss G, Van Duyne GD. The Gemin6-Gemin7 heterodimer from the survival of motor neurons complex has an Sm protein-like structure. Structure (London, England : 1993). 13: 883-92. PMID 15939020 DOI: 10.1016/J.Str.2005.03.014  0.684
2005 Ghosh K, Lau CK, Guo F, Segall AM, Van Duyne GD. Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination. The Journal of Biological Chemistry. 280: 8290-9. PMID 15591069 DOI: 10.1074/Jbc.M411668200  0.393
2003 Lau CK, Diem MD, Dreyfuss G, Van Duyne GD. Structure of the Y14-Magoh core of the exon junction complex. Current Biology : Cb. 13: 933-41. PMID 12781131 DOI: 10.1016/S0960-9822(03)00328-2  0.321
2000 Dimova D, Weigel P, Takahashi M, Marc F, Van Duyne GD, Sakanyan V. Thermostability, oligomerization and DNA-binding properties of the regulatory protein ArgR from the hyperthermophilic bacterium Thermotoga neapolitana Molecular and General Genetics. 263: 119-130. PMID 10732680  0.301
1999 Guo F, Gopaul DN, Van Duyne GD. Asymmetric DNA bending in the Cre-loxP site-specific recombination synapse Proceedings of the National Academy of Sciences of the United States of America. 96: 7143-7148. PMID 10377382 DOI: 10.1073/Pnas.96.13.7143  0.411
1999 Ni J, Sakanyan V, Charlier D, Glansdorff N, Van Duyne GD. Structure of the arginine repressor from Bacillus stearothermophilus. Nature Structural Biology. 6: 427-32. PMID 10331868 DOI: 10.1038/8229  0.593
1999 Gopaul DN, Van Duyne GD. Structure and mechanism in site-specific recombination Current Opinion in Structural Biology. 9: 14-20. PMID 10047575 DOI: 10.1016/S0959-440X(99)80003-7  0.365
1998 Gopaul DN, Guo F, Van Duyne GD. Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination Embo Journal. 17: 4175-4187. PMID 9670032 DOI: 10.1093/Emboj/17.14.4175  0.463
1997 Guo F, Gopaul DN, Van Duyne GD. Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse Nature. 389: 40-46. PMID 9288963 DOI: 10.1038/37925  0.416
1996 Van Duyne GD, Ghosh G, Maas WK, Sigler PB. Structure of the oligomerization and L-arginine binding domain of the arginine repressor of Escherichia coli. Journal of Molecular Biology. 256: 377-91. PMID 8594204 DOI: 10.1006/jmbi.1996.0093  0.351
1993 Van Duyne GD, Standaert RF, Karplus PA, Schreiber SL, Clardy J. Atomic structures of the human immunophilin FKBP-12 complexes with FK506 and rapamycin Journal of Molecular Biology. 229: 105-124. PMID 7678431 DOI: 10.1006/Jmbi.1993.1012  0.481
1993 Miller RL, Toreki R, LaPointe RE, Wolczanski PT, Van Duyne GD, Christopher Roe D. Syntheses, carbonylations, and dihydrogen exchange studies of monomeric and dimeric silox (tBu3SiO-) hydrides of tantalum: Structure of [(silox)2TaH2]2 Journal of the American Chemical Society. 115: 5570-5588.  0.301
1991 Van Duyne GD, Standaert RF, Karplus PA, Schreiber SL, Clarpy J. Atomic structure of FKBP-FK506, an immunophilin-immunosuppressant complex Science. 252: 839-842. PMID 1709302 DOI: 10.1126/Science.1709302  0.38
1991 Van Duyne GD, Standaert RF, Schreiber SL, Clardy J. Atomic structure of the rapamycin human immunophilin FKBP-12 complex Journal of the American Chemical Society. 113: 7433-7434. DOI: 10.2210/Pdb1Fkb/Pdb  0.406
1988 Lindquist N, Fenical W, Sesin DF, Ireland CM, Van Duyne GD, Forsyth CJ, Clardy J. Isolation and structure determination of the didemnenones, novel cytotoxic metabolites from tunicates Journal of the American Chemical Society. 110: 1308-1309.  0.544
1986 Gerwick WH, Lopez A, Van Duyne GD, Clardy J, Ortiz W, Baez A. Hormothamnione, a novel cytotoxic styrylchromone from the marine cyanophyte hormothamnion enteromorphoides grunow Tetrahedron Letters. 27: 1979-1982. DOI: 10.1016/S0040-4039(00)84426-3  0.326
1985 Roll DM, Chang CWJ, Scheuer PJ, Gray GA, Shoolery JN, Matsumoto GK, Van Duyne GD, Clardy J. Structure of the psammaplysins Journal of the American Chemical Society. 107: 2916-2920. DOI: 10.1021/Ja00296A014  0.399
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