Thomas Hollis - Publications

Biochemistry and Molecular Biology Wake Forest University, Winston-Salem, NC, United States 
Biochemistry, Microbiology Biology

45 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Booth WT, Davis RR, Deora R, Hollis T. Structural mechanism for regulation of DNA binding of BpsR, a Bordetella regulator of biofilm formation, by 6-hydroxynicotinic acid. Plos One. 14: e0223387. PMID 31697703 DOI: 10.1371/Journal.Pone.0223387  0.36
2018 Guragain M, Jennings-Gee J, Cattelan N, Finger M, Conover MS, Hollis T, Deora R. The transcriptional regulator BpsR controls the growth ofby repressing genes involved in nicotinic acid degradation. Journal of Bacteriology. PMID 29581411 DOI: 10.1128/Jb.00712-17  0.36
2017 Wang F, Zahid OK, Swain B, Parsonage D, Hollis T, Harvey S, Perrino DF, Kohli RM, Taylor EW, Hall AR. Solid-state nanopore analysis of diverse DNA base modifications using a modular enzymatic labeling process. Nano Letters. PMID 28967259 DOI: 10.1021/Acs.Nanolett.7B03911  0.36
2015 Grieves JL, Fye JM, Harvey S, Grayson JM, Hollis T, Perrino FW. Exonuclease TREX1 degrades double-stranded DNA to prevent spontaneous lupus-like inflammatory disease. Proceedings of the National Academy of Sciences of the United States of America. 112: 5117-22. PMID 25848017 DOI: 10.1073/Pnas.1423804112  0.68
2015 Davis RR, Shaban NM, Perrino FW, Hollis T. Crystal structure of RNA-DNA duplex provides insight into conformational changes induced by RNase H binding. Cell Cycle (Georgetown, Tex.). 14: 668-73. PMID 25664393 DOI: 10.4161/15384101.2014.994996  0.68
2014 Huhn AJ, Parsonage D, Horita DA, Torti FM, Torti SV, Hollis T. The high-molecular-weight kininogen domain 5 is an intrinsically unstructured protein and its interaction with ferritin is metal mediated. Protein Science : a Publication of the Protein Society. 23: 1013-22. PMID 24810540 DOI: 10.1002/Pro.2486  0.68
2014 Limoli DH, Rockel AB, Host KM, Jha A, Kopp BT, Hollis T, Wozniak DJ. Cationic antimicrobial peptides promote microbial mutagenesis and pathoadaptation in chronic infections. Plos Pathogens. 10: e1004083. PMID 24763694 DOI: 10.1371/Journal.Ppat.1004083  0.68
2014 Fye JM, Coffin SR, Orebaugh CD, Hollis T, Perrino FW. The Arg-62 residues of the TREX1 exonuclease act across the dimer interface contributing to catalysis in the opposing protomers. The Journal of Biological Chemistry. 289: 11556-65. PMID 24616097 DOI: 10.1074/Jbc.M114.559252  0.68
2013 Orebaugh CD, Fye JM, Harvey S, Hollis T, Wilkinson JC, Perrino FW. The TREX1 C-terminal region controls cellular localization through ubiquitination Journal of Biological Chemistry. 288: 28881-28892. PMID 23979357 DOI: 10.1074/Jbc.M113.503391  0.68
2012 Pryor EE, Wozniak DJ, Hollis T. Crystallization of Pseudomonas aeruginosa AmrZ protein: development of a comprehensive method for obtaining and optimization of protein-DNA crystals. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 68: 985-93. PMID 22869139 DOI: 10.1107/S1744309112025316  0.68
2012 Pryor EE, Waligora EA, Xu B, Dellos-Nolan S, Wozniak DJ, Hollis T. The transcription factor AmrZ utilizes multiple DNA binding modes to recognize activator and repressor sequences of Pseudomonas aeruginosa virulence genes. Plos Pathogens. 8: e1002648. PMID 22511872 DOI: 10.1371/Journal.Ppat.1002648  0.68
2012 Bailey SL, Harvey S, Perrino FW, Hollis T. Defects in DNA degradation revealed in crystal structures of TREX1 exonuclease mutations linked to autoimmune disease. Dna Repair. 11: 65-73. PMID 22071149 DOI: 10.1016/J.Dnarep.2011.10.007  0.68
2011 Powell RD, Holland PJ, Hollis T, Perrino FW. Aicardi-Goutieres syndrome gene and HIV-1 restriction factor SAMHD1 is a dGTP-regulated deoxynucleotide triphosphohydrolase. The Journal of Biological Chemistry. 286: 43596-600. PMID 22069334 DOI: 10.1074/Jbc.C111.317628  0.68
2011 Orebaugh CD, Fye JM, Harvey S, Hollis T, Perrino FW. The TREX1 exonuclease R114H mutation in Aicardi-Goutières syndrome and lupus reveals dimeric structure requirements for DNA degradation activity. The Journal of Biological Chemistry. 286: 40246-54. PMID 21937424 DOI: 10.1074/Jbc.M111.297903  0.68
2011 Fye JM, Orebaugh CD, Coffin SR, Hollis T, Perrino FW. Dominant mutation of the TREX1 exonuclease gene in lupus and Aicardi-Goutieres syndrome. The Journal of Biological Chemistry. 286: 32373-82. PMID 21808053 DOI: 10.1074/Jbc.M111.276287  0.68
2011 Coffin SR, Hollis T, Perrino FW. Functional consequences of the RNase H2A subunit mutations that cause Aicardi-Goutieres syndrome. The Journal of Biological Chemistry. 286: 16984-91. PMID 21454563 DOI: 10.1074/Jbc.M111.228833  0.68
2010 Waligora EA, Ramsey DM, Pryor EE, Lu H, Hollis T, Sloan GP, Deora R, Wozniak DJ. AmrZ beta-sheet residues are essential for DNA binding and transcriptional control of Pseudomonas aeruginosa virulence genes. Journal of Bacteriology. 192: 5390-401. PMID 20709902 DOI: 10.1128/Jb.00711-10  0.68
2010 Shaban NM, Harvey S, Perrino FW, Hollis T. The structure of the mammalian RNase H2 complex provides insight into RNA.NA hybrid processing to prevent immune dysfunction. The Journal of Biological Chemistry. 285: 3617-24. PMID 19923215 DOI: 10.1074/Jbc.M109.059048  0.68
2010 Huhn AJ, Parsonage D, Torti SV, Hollis T. Abstract 1285: The effects of the HK5-ferritin interaction and iron on tumor angiogenesis Cancer Research. 70: 1285-1285. DOI: 10.1158/1538-7445.Am10-1285  0.36
2009 de Silva U, Perrino FW, Hollis T. DNA binding induces active site conformational change in the human TREX2 3'-exonuclease. Nucleic Acids Research. 37: 2411-7. PMID 19321497 DOI: 10.1093/Nar/Gkp025  0.68
2009 Perrino FW, Harvey S, Shaban NM, Hollis T. RNaseH2 mutants that cause Aicardi-Goutieres syndrome are active nucleases. Journal of Molecular Medicine (Berlin, Germany). 87: 25-30. PMID 19034401 DOI: 10.1007/S00109-008-0422-3  0.68
2009 Vasilyeva A, Clodfelter JE, Rector B, Hollis T, Scarpinato KD, Salsbury FR. Small molecule induction of MSH2-dependent cell death suggests a vital role of mismatch repair proteins in cell death. Dna Repair. 8: 103-13. PMID 18955167 DOI: 10.1016/J.Dnarep.2008.09.008  0.68
2008 Lehtinen DA, Harvey S, Mulcahy MJ, Hollis T, Perrino FW. The TREX1 double-stranded DNA degradation activity is defective in dominant mutations associated with autoimmune disease. The Journal of Biological Chemistry. 283: 31649-56. PMID 18805785 DOI: 10.1074/Jbc.M806155200  0.68
2008 Perrino FW, de Silva U, Harvey S, Pryor EE, Cole DW, Hollis T. Cooperative DNA binding and communication across the dimer interface in the TREX2 3' --> 5'-exonuclease. The Journal of Biological Chemistry. 283: 21441-52. PMID 18534978 DOI: 10.1074/Jbc.M803629200  0.68
2007 Lee-Kirsch MA, Gong M, Chowdhury D, Senenko L, Engel K, Lee YA, de Silva U, Bailey SL, Witte T, Vyse TJ, Kere J, Pfeiffer C, Harvey S, Wong A, Koskenmies S, ... ... Hollis T, et al. Mutations in the gene encoding the 3'-5' DNA exonuclease TREX1 are associated with systemic lupus erythematosus. Nature Genetics. 39: 1065-7. PMID 17660818 DOI: 10.1038/Ng2091  0.68
2007 Lee-Kirsch MA, Chowdhury D, Harvey S, Gong M, Senenko L, Engel K, Pfeiffer C, Hollis T, Gahr M, Perrino FW, Lieberman J, Hubner N. A mutation in TREX1 that impairs susceptibility to granzyme A-mediated cell death underlies familial chilblain lupus. Journal of Molecular Medicine (Berlin, Germany). 85: 531-7. PMID 17440703 DOI: 10.1007/S00109-007-0199-9  0.68
2007 Metz AH, Hollis T, Eichman BF. DNA damage recognition and repair by 3-methyladenine DNA glycosylase I (TAG). The Embo Journal. 26: 2411-20. PMID 17410210 DOI: 10.1038/Sj.Emboj.7601649  0.68
2007 Rice G, Newman WG, Dean J, Patrick T, Parmar R, Flintoff K, Robins P, Harvey S, Hollis T, O'Hara A, Herrick AL, Bowden AP, Perrino FW, Lindahl T, Barnes DE, et al. Heterozygous mutations in TREX1 cause familial chilblain lupus and dominant Aicardi-Goutieres syndrome. American Journal of Human Genetics. 80: 811-5. PMID 17357087 DOI: 10.1086/513443  0.68
2007 de Silva U, Choudhury S, Bailey SL, Harvey S, Perrino FW, Hollis T. The crystal structure of TREX1 explains the 3' nucleotide specificity and reveals a polyproline II helix for protein partnering. The Journal of Biological Chemistry. 282: 10537-43. PMID 17293595 DOI: 10.1074/Jbc.M700039200  0.68
2007 Hollis T. Crystallization of protein-DNA complexes. Methods in Molecular Biology (Clifton, N.J.). 363: 225-37. PMID 17272844 DOI: 10.1007/978-1-59745-209-0_11  0.68
2006 Salsbury FR, Clodfelter JE, Gentry MB, Hollis T, Scarpinato KD. The molecular mechanism of DNA damage recognition by MutS homologs and its consequences for cell death response. Nucleic Acids Research. 34: 2173-85. PMID 16648361 DOI: 10.1093/Nar/Gkl238  0.68
2005 Perrino FW, Harvey S, McMillin S, Hollis T. The human TREX2 3' -> 5'-exonuclease structure suggests a mechanism for efficient nonprocessive DNA catalysis. The Journal of Biological Chemistry. 280: 15212-8. PMID 15661738 DOI: 10.1074/Jbc.M500108200  0.68
2004 Perrino FW, Krol A, Harvey S, Zheng SL, Horita DA, Hollis T, Meyers DA, Isaacs WB, Xu J. Sequence variants in the 3'-->5' deoxyribonuclease TREX2: identification in a genetic screen and effects on catalysis by the recombinant proteins. Advances in Enzyme Regulation. 44: 37-49. PMID 15581481 DOI: 10.1016/J.Advenzreg.2003.11.010  0.68
2002 Rezende LF, Hollis T, Ellenberger T, Richardson CC. Essential amino acid residues in the single-stranded DNA-binding protein of bacteriophage T7. Identification of the dimer interface. The Journal of Biological Chemistry. 277: 50643-53. PMID 12379653 DOI: 10.1074/Jbc.M207359200  0.68
2001 Hollis T, Lau A, Ellenberger T. Crystallizing thoughts about DNA base excision repair Progress in Nucleic Acid Research and Molecular Biology. 68: 305-314. PMID 11554308 DOI: 10.1016/S0079-6603(01)68109-1  0.68
2001 Hollis T, Stattel JM, Walther DS, Richardson CC, Ellenberger T. Structure of the gene 2.5 protein, a single-stranded DNA binding protein encoded by bacteriophage T7. Proceedings of the National Academy of Sciences of the United States of America. 98: 9557-62. PMID 11481454 DOI: 10.1073/Pnas.171317698  0.68
2000 Hollis T, Lau A, Ellenberger T. Structural studies of human alkyladenine glycosylase and E. coli 3-methyladenine glycosylase Mutation Research - Dna Repair. 460: 201-210. PMID 10946229 DOI: 10.1016/S0921-8777(00)00027-6  0.68
2000 Hollis T, Monzingo AF, Bortone K, Ernst S, Cox R, Robertus JD. The X-ray structure of a chitinase from the pathogenic fungus Coccidioides immitis. Protein Science : a Publication of the Protein Society. 9: 544-51. PMID 10752616 DOI: 10.1110/Ps.9.3.544  0.68
2000 Hollis T, Ichikawa Y, Ellenberger T. DNA bending and a flip-out mechanism for base excision by the helix-hairpin-helix DNA glycosylase, Escherichia coli AlkA Embo Journal. 19: 758-766. PMID 10675345 DOI: 10.1093/Emboj/19.4.758  0.68
1998 Hollis T, Monzingo AF, Bortone K, Schelp E, Cox R, Robertus JD. Crystallization and preliminary X-ray analysis of a chitinase from the fungal pathogen Coccidioides immitis. Acta Crystallographica. Section D, Biological Crystallography. 54: 1412-3. PMID 10089522 DOI: 10.1107/S0907444998008531  0.68
1998 Yan X, Day P, Hollis T, Monzingo AF, Schelp E, Robertus JD, Milne GW, Wang S. Recognition and interaction of small rings with the ricin A-chain binding site. Proteins. 31: 33-41. PMID 9552157 DOI: 10.1002/(Sici)1097-0134(19980401)31:1<33::Aid-Prot4>3.0.Co;2-I  0.68
1997 Hollis T, Honda Y, Fukamizo T, Marcotte E, Day PJ, Robertus JD. Kinetic analysis of barley chitinase. Archives of Biochemistry and Biophysics. 344: 335-42. PMID 9264547 DOI: 10.1006/Abbi.1997.0225  0.68
1997 Yan X, Hollis T, Svinth M, Day P, Monzingo AF, Milne GW, Robertus JD. Structure-based identification of a ricin inhibitor. Journal of Molecular Biology. 266: 1043-9. PMID 9086280 DOI: 10.1006/Jmbi.1996.0865  0.68
1996 Robertus JD, Yan X, Ernst S, Monzingo A, Worley S, Day P, Hollis T, Svinth M. Structural analysis of ricin and implications for inhibitor design. Toxicon : Official Journal of the International Society On Toxinology. 34: 1325-34. PMID 9027989 DOI: 10.1016/S0041-0101(96)00103-1  0.68
1995 Hart PJ, Pfluger HD, Monzingo AF, Hollis T, Robertus JD. The refined crystal structure of an endochitinase from Hordeum vulgare L. seeds at 1.8 A resolution. Journal of Molecular Biology. 248: 402-13. PMID 7739049 DOI: 10.1016/S0022-2836(95)80059-X  0.68
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