Arun Malhotra - Publications

Biochemistry and Molecular Biology (Medicine) University of Miami, Coral Gables, FL 
Biochemistry, Molecular Biology

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.


Year Citation  Score
2017 Schmier BJ, Nelersa CM, Malhotra A. Structural Basis for the Bidirectional Activity of Bacillus nanoRNase NrnA. Scientific Reports. 7: 11085. PMID 28894100 DOI: 10.1038/s41598-017-09403-x  0.8
2016 Hossain ST, Malhotra A, Deutscher MP. How RNase R Degrades Structured RNA: Role of the Helicase Activity and the S1 Domain. The Journal of Biological Chemistry. PMID 26872969 DOI: 10.1074/jbc.M116.717991  0.64
2016 Song L, Wang G, Malhotra A, Deutscher MP, Liang W. Reversible acetylation on Lys501 regulates the activity of RNase II. Nucleic Acids Research. PMID 26847092 DOI: 10.1093/nar/gkw053  0.52
2015 Hossain ST, Malhotra A, Deutscher MP. The Helicase Activity of Ribonuclease R Is Essential for Efficient Nuclease Activity. The Journal of Biological Chemistry. 290: 15697-706. PMID 25931119 DOI: 10.1074/jbc.M115.650176  0.64
2015 Yuan F, Dutta T, Wang L, Song L, Gu L, Qian L, Benitez A, Ning S, Malhotra A, Deutscher MP, Zhang Y. Human DNA Exonuclease TREX1 Is Also an Exoribonuclease That Acts on Single-stranded RNA. The Journal of Biological Chemistry. 290: 13344-53. PMID 25855793 DOI: 10.1074/jbc.M115.653915  0.64
2013 Dutta T, Malhotra A, Deutscher MP. How a CCA sequence protects mature tRNAs and tRNA precursors from action of the processing enzyme RNase BN/RNase Z. The Journal of Biological Chemistry. 288: 30636-44. PMID 24022488 DOI: 10.1074/jbc.M113.514570  0.64
2012 Dutta T, Malhotra A, Deutscher MP. Exoribonuclease and endoribonuclease activities of RNase BN/RNase Z both function in vivo. The Journal of Biological Chemistry. 287: 35747-55. PMID 22893707 DOI: 10.1074/jbc.M112.407403  0.64
2012 McDonald CB, Buffa L, Bar-Mag T, Salah Z, Bhat V, Mikles DC, Deegan BJ, Seldeen KL, Malhotra A, Sudol M, Aqeilan RI, Nawaz Z, Farooq A. Biophysical basis of the binding of WWOX tumor suppressor to WBP1 and WBP2 adaptors. Journal of Molecular Biology. 422: 58-74. PMID 22634283 DOI: 10.1016/j.jmb.2012.05.015  0.64
2012 Schmier BJ, Seetharaman J, Deutscher MP, Hunt JF, Malhotra A. The structure and enzymatic properties of a novel RNase II family enzyme from Deinococcus radiodurans. Journal of Molecular Biology. 415: 547-59. PMID 22133431 DOI: 10.1016/j.jmb.2011.11.031  0.64
2011 Nelersa CM, Schmier BJ, Malhotra A. Purification and crystallization of Bacillus subtilis NrnA, a novel enzyme involved in nanoRNA degradation. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 67: 1235-8. PMID 22102036 DOI: 10.1107/S1744309111026509  0.64
2011 Liang W, Malhotra A, Deutscher MP. Acetylation regulates the stability of a bacterial protein: growth stage-dependent modification of RNase R. Molecular Cell. 44: 160-6. PMID 21981926 DOI: 10.1016/j.molcel.2011.06.037  0.64
2011 Malhotra A. Reprint of: Tagging for Protein Expression. Protein Expression and Purification. PMID 21889988 DOI: 10.1016/j.pep.2011.08.023  0.64
2009 Malhotra A. Chapter 16 Tagging for Protein Expression Methods in Enzymology. 463: 239-258. PMID 19892176 DOI: 10.1016/S0076-6879(09)63016-0  0.64
2008 Larrea AA, Pedroso IM, Malhotra A, Myers RS. Identification of two conserved aspartic acid residues required for DNA digestion by a novel thermophilic Exonuclease VII in Thermotoga maritima. Nucleic Acids Research. 36: 5992-6003. PMID 18812402 DOI: 10.1093/nar/gkn588  0.64
2007 Lalonde MS, Zuo Y, Zhang J, Gong X, Wu S, Malhotra A, Li Z. Exoribonuclease R in Mycoplasma genitalium can carry out both RNA processing and degradative functions and is sensitive to RNA ribose methylation. Rna (New York, N.Y.). 13: 1957-68. PMID 17872508 DOI: 10.1261/rna.706207  0.64
2007 Vaidyanathan PP, Deutscher MP, Malhotra A. RluD, a highly conserved pseudouridine synthase, modifies 50S subunits more specifically and efficiently than free 23S rRNA. Rna (New York, N.Y.). 13: 1868-76. PMID 17872507 DOI: 10.1261/rna.711207  0.64
2007 Abaffy T, Malhotra A, Luetje CW. The molecular basis for ligand specificity in a mouse olfactory receptor: a network of functionally important residues. The Journal of Biological Chemistry. 282: 1216-24. PMID 17114180 DOI: 10.1074/jbc.M609355200  0.64
2007 Tolun AA, Dickerson IM, Malhotra A. Overexpression and purification of human calcitonin gene-related peptide-receptor component protein in Escherichia coli. Protein Expression and Purification. 52: 167-74. PMID 17067815 DOI: 10.1016/j.pep.2006.09.008  0.64
2006 Zuo Y, Vincent HA, Zhang J, Wang Y, Deutscher MP, Malhotra A. Structural basis for processivity and single-strand specificity of RNase II. Molecular Cell. 24: 149-56. PMID 16996291 DOI: 10.1016/j.molcel.2006.09.004  0.64
2006 Hsiao B, Mihalak KB, Repicky SE, Everhart D, Mederos AH, Malhotra A, Luetje CW. Determinants of zinc potentiation on the alpha4 subunit of neuronal nicotinic receptors. Molecular Pharmacology. 69: 27-36. PMID 16189299 DOI: 10.1124/mol.105.015164  0.64
2004 Fiedler TJ, Vincent HA, Zuo Y, Gavrialov O, Malhotra A. Purification and crystallization of Escherichia coli oligoribonuclease. Acta Crystallographica. Section D, Biological Crystallography. 60: 736-9. PMID 15039570 DOI: 10.1107/S0907444904002252  0.64
2004 Everhart D, Cartier GE, Malhotra A, Gomes AV, McIntosh JM, Luetje CW. Determinants of potency on alpha-conotoxin MII, a peptide antagonist of neuronal nicotinic receptors. Biochemistry. 43: 2732-7. PMID 15005608 DOI: 10.1021/bi036180h  0.64
2004 Kaya Y, Del Campo M, Ofengand J, Malhotra A. Crystal structure of TruD, a novel pseudouridine synthase with a new protein fold. The Journal of Biological Chemistry. 279: 18107-10. PMID 14999002 DOI: 10.1074/jbc.C400072200  0.48
2004 Del Campo M, Ofengand J, Malhotra A. Crystal structure of the catalytic domain of RluD, the only rRNA pseudouridine synthase required for normal growth of Escherichia coli. Rna (New York, N.Y.). 10: 231-9. PMID 14730022 DOI: 10.1261/rna.5187404  0.48
2003 Del Campo M, Ofengand J, Malhotra A. Purification and crystallization of Escherichia coli pseudouridine synthase RluD. Acta Crystallographica. Section D, Biological Crystallography. 59: 1871-3. PMID 14501142 DOI: 10.1107/S0907444903018468  0.48
2003 Everhart D, Reiller E, Mirzoian A, McIntosh JM, Malhotra A, Luetje CW. Identification of residues that confer alpha-conotoxin-PnIA sensitivity on the alpha 3 subunit of neuronal nicotinic acetylcholine receptors. The Journal of Pharmacology and Experimental Therapeutics. 306: 664-70. PMID 12734390 DOI: 10.1124/jpet.103.051656  0.64
2001 Ofengand J, Malhotra A, Remme J, Gutgsell NS, Del Campo M, Jean-Charles S, Peil L, Kaya Y. Pseudouridines and pseudouridine synthases of the ribosome. Cold Spring Harbor Symposia On Quantitative Biology. 66: 147-59. PMID 12762017  0.48
2001 Malhotra A, Ofengand J. Structure determination of ribosomes and other complex ribonucleoproteins Methods. 25: 289-291. DOI: 10.1006/meth.2001.1240  0.64
2000 Korzheva N, Mustaev A, Kozlov M, Malhotra A, Nikiforov V, Goldfarb A, Darst SA. A structural model of transcription elongation. Science (New York, N.Y.). 289: 619-25. PMID 10915625 DOI: 10.1126/science.289.5479.619  0.64
1998 Polyakov A, Richter C, Malhotra A, Koulich D, Borukhov S, Darst SA. Visualization of the binding site for the transcript cleavage factor GreB on Escherichia coli RNA polymerase. Journal of Molecular Biology. 281: 465-73. PMID 9698562 DOI: 10.1006/jmbi.1998.1958  0.64
1998 Malhotra A, Penczek P, Agrawal RK, Gabashvili IS, Grassucci RA, Jünemann R, Burkhardt N, Nierhaus KH, Frank J. Escherichia coli 70 S ribosome at 15 A resolution by cryo-electron microscopy: localization of fMet-tRNAfMet and fitting of L1 protein. Journal of Molecular Biology. 280: 103-16. PMID 9653034 DOI: 10.1006/jmbi.1998.1859  0.56
1997 Koulich D, Orlova M, Malhotra A, Sali A, Darst SA, Borukhov S. Domain organization of Escherichia coli transcript cleavage factors GreA and GreB. The Journal of Biological Chemistry. 272: 7201-10. PMID 9054416 DOI: 10.1074/jbc.272.11.7201  0.64
1994 Easterwood TR, Major F, Malhotra A, Harvey SC. Orientations of transfer RNA in the ribosomal A and P sites. Nucleic Acids Research. 22: 3779-86. PMID 7937092 DOI: 10.1093/nar/22.18.3779  0.64
1994 Malhotra A, Tan RK, Harvey SC. Modeling large RNAs and ribonucleoprotein particles using molecular mechanics techniques. Biophysical Journal. 66: 1777-95. PMID 7521223 DOI: 10.1016/S0006-3495(94)80972-5  0.64
1994 Malhotra A, Harvey SC. A quantitative model of the Escherichia coli 16 S RNA in the 30 S ribosomal subunit. Journal of Molecular Biology. 240: 308-40. PMID 7518524 DOI: 10.1006/jmbi.1994.1448  0.64
1993 Leontis NB, Hills MT, Piotto M, Malhotra A, Nussbaum J, Gorenstein DG. A model for the solution structure of a branched, three-strand DNA complex. Journal of Biomolecular Structure & Dynamics. 11: 215-23. PMID 8286052 DOI: 10.1080/07391102.1993.10508722  0.64
1993 Malhotra A, Gabb HA, Harvey SC. Modeling large nucleic acids Current Opinion in Structural Biology. 3: 241-246. DOI: 10.1016/S0959-440X(05)80159-9  0.64
1990 Malhotra A, Tan RK, Harvey SC. Prediction of the three-dimensional structure of Escherichia coli 30S ribosomal subunit: a molecular mechanics approach. Proceedings of the National Academy of Sciences of the United States of America. 87: 1950-4. PMID 2408047 DOI: 10.1073/pnas.87.5.1950  0.64
1990 Malhotra A, Sadana A. Role of the initial state distribution on first-order deactivation of microheterogeneous enzyme samples Journal of Theoretical Biology. 145: 143-162. DOI: 10.1016/S0022-5193(05)80121-3  0.64
1989 Malhotra A, Sadana A. Effect of enzyme deactivation on substrate conversion in fixed- and fluid-bed reactors. Influence of enzyme microheterogeneity Annals of the New York Academy of Sciences. 542: 312-318.  0.64
1988 Malhotra A, Sadana A. Effect of enzyme microheterogeneity and distribution of initial states on first-order deactivation and on conversion in a fixed-bed reactor - Scientific note Applied Biochemistry and Biotechnology. 17: 335-346. DOI: 10.1007/BF02779168  0.64
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