Hasan Yardimci, Ph.D. - Publications

Affiliations: 
2006 Johns Hopkins University, Baltimore, MD 
Area:
Condensed Matter Physics, Physical Chemistry

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Pelliciari S, Bodet-Lefèvre S, Fenyk S, Stevens D, Winterhalter C, Schramm FD, Pintar S, Burnham DR, Merces G, Richardson TT, Tashiro Y, Hubbard J, Yardimci H, Ilangovan A, Murray H. The bacterial replication origin BUS promotes nucleobase capture. Nature Communications. 14: 8339. PMID 38097584 DOI: 10.1038/s41467-023-43823-w  0.569
2023 Belan O, Greenhough L, Kuhlen L, Anand R, Kaczmarczyk A, Gruszka DT, Yardimci H, Zhang X, Rueda DS, West SC, Boulton SJ. Visualization of direct and diffusion-assisted RAD51 nucleation by full-length human BRCA2 protein. Molecular Cell. PMID 37499663 DOI: 10.1016/j.molcel.2023.06.031  0.478
2022 Ballandras-Colas A, Chivukula V, Gruszka DT, Shan Z, Singh PK, Pye VE, McLean RK, Bedwell GJ, Li W, Nans A, Cook NJ, Fadel HJ, Poeschla EM, Griffiths DJ, Vargas J, ... ... Yardimci H, et al. Multivalent interactions essential for lentiviral integrase function. Nature Communications. 13: 2416. PMID 35504909 DOI: 10.1038/s41467-022-29928-8  0.4
2021 Cameron G, Yardimci H. Studying chromosome biology with single-molecule resolution in Xenopus laevis egg extracts. Essays in Biochemistry. PMID 33438722 DOI: 10.1042/EBC20200026  0.511
2020 Yardimci S, Burnham DR, Terry SYA, Yardimci H. Three-dimensional super-resolution fluorescence imaging of DNA. Scientific Reports. 10: 12504. PMID 32719468 DOI: 10.1038/s41598-020-68892-5  0.437
2020 Kose HB, Xie S, Cameron G, Strycharska MS, Yardimci H. Duplex DNA engagement and RPA oppositely regulate the DNA-unwinding rate of CMG helicase. Nature Communications. 11: 3713. PMID 32709841 DOI: 10.1038/s41467-020-17443-7  0.598
2020 Thomas CA, Craig JM, Laszlo AH, Nova IC, Xie S, Huang JR, Kim HC, Abell SJ, Yardimci H, Gundlach JH. SV40 Large T Antigen Helicase Unwinds Double-Stranded DNA in Single-Nucleotide Steps as Revealed by Nanopore Tweezers Biophysical Journal. 118: 72a. DOI: 10.1016/J.Bpj.2019.11.568  0.579
2019 Eickhoff P, Kose HB, Martino F, Petojevic T, Abid Ali F, Locke J, Tamberg N, Nans A, Berger JM, Botchan MR, Yardimci H, Costa A. Molecular Basis for ATP-Hydrolysis-Driven DNA Translocation by the CMG Helicase of the Eukaryotic Replisome. Cell Reports. 28: 2673-2688.e8. PMID 31484077 DOI: 10.1016/J.Celrep.2019.07.104  0.536
2019 Burnham DR, Kose HB, Hoyle RB, Yardimci H. The mechanism of DNA unwinding by the eukaryotic replicative helicase. Nature Communications. 10: 2159. PMID 31089141 DOI: 10.1038/s41467-019-09896-2  0.59
2019 Kose HB, Larsen NB, Duxin JP, Yardimci H. Dynamics of the Eukaryotic Replicative Helicase at Lagging-Strand Protein Barriers Support the Steric Exclusion Model. Cell Reports. 26: 2113-2125.e6. PMID 30784593 DOI: 10.1016/J.Celrep.2019.01.086  0.764
2014 Duxin JP, Dewar JM, Yardimci H, Walter JC. Repair of a DNA-protein crosslink by replication-coupled proteolysis. Cell. 159: 346-57. PMID 25303529 DOI: 10.1016/J.Cell.2014.09.024  0.648
2014 Yardimci H, Walter JC. Prereplication-complex formation: a molecular double take? Nature Structural & Molecular Biology. 21: 20-5. PMID 24389553 DOI: 10.1038/Nsmb.2738  0.574
2012 Yardimci H, Wang X, Loveland AB, Tappin I, Rudner DZ, Hurwitz J, van Oijen AM, Walter JC. Bypass of a protein barrier by a replicative DNA helicase. Nature. 492: 205-9. PMID 23201686 DOI: 10.1038/Nature11730  0.752
2012 Yardimci H, Loveland AB, van Oijen AM, Walter JC. Single-molecule analysis of DNA replication in Xenopus egg extracts. Methods (San Diego, Calif.). 57: 179-86. PMID 22503776 DOI: 10.1016/J.Ymeth.2012.03.033  0.684
2011 Fu YV, Yardimci H, Long DT, Ho TV, Guainazzi A, Bermudez VP, Hurwitz J, van Oijen A, Schärer OD, Walter JC. Selective bypass of a lagging strand roadblock by the eukaryotic replicative DNA helicase. Cell. 146: 931-41. PMID 21925316 DOI: 10.1016/J.Cell.2011.07.045  0.773
2011 Yardimci H, Oijen AMv, Walter JC. Single-Molecule Studies of the Eukaryotic Replicative DNA Helicase MCM2-7 Biophysical Journal. 100: 2-9. DOI: 10.1016/J.Bpj.2010.12.1521  0.752
2010 Yardimci H, Loveland AB, Habuchi S, van Oijen AM, Walter JC. Uncoupling of sister replisomes during eukaryotic DNA replication. Molecular Cell. 40: 834-40. PMID 21145490 DOI: 10.1016/J.Molcel.2010.11.027  0.739
2010 Yardimci H, Kochaniak AB, Habuchi S, Havens CG, Walter JC, Oijen Av. Single Molecule Studies of Eukaryotic Replisomes in Xenopus Egg Extracts Biophysical Journal. 98: 4-7. DOI: 10.1016/J.Bpj.2009.12.2371  0.722
2006 Yardimci H, Leheny RL. Aging of the Johari-Goldstein relaxation in the glass-forming liquids sorbitol and xylitol. The Journal of Chemical Physics. 124: 214503. PMID 16774419 DOI: 10.1063/1.2197494  0.522
2005 Yardimci H, Chung B, Harden JL, Leheny RL. Phase behavior and local dynamics of concentrated triblock copolymer micelles. The Journal of Chemical Physics. 123: 244908. PMID 16396574 DOI: 10.1063/1.2132278  0.526
2004 Bandyopadhyay R, Liang D, Yardimci H, Sessoms DA, Borthwick MA, Mochrie SG, Harden JL, Leheny RL. Evolution of particle-scale dynamics in an aging clay suspension. Physical Review Letters. 93: 228302. PMID 15601124 DOI: 10.1103/Physrevlett.93.228302  0.586
2003 Yardimci H, Leheny RL. Memory in an aging molecular glass Europhysics Letters. 62: 203-209. DOI: 10.1209/Epl/I2003-00347-0  0.518
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