Chia-Hong Tsai, Ph.D. - Related publications

2014 Plant Biology Michigan State University, East Lansing, MI 
Molecular Biology, Biochemistry, Plant Culture Agriculture
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Woldemeskel SA, Daitch AK, Alvarez L, Panis G, Zeinert R, Gonzalez D, Smith E, Collier J, Chien P, Cava F, Viollier PH, Goley ED. The conserved transcriptional regulator CdnL is required for metabolic homeostasis and morphogenesis in Caulobacter. Plos Genetics. 16: e1008591. PMID 31961855 DOI: 10.1371/journal.pgen.1008591   
2020 Wu L, Li J, Li Z, Zhang F, Tan X. Transcriptomic Analyses of 'Huaxin' Leaf Reveal Candidate Genes Related to Long-Term Cold Stress. International Journal of Molecular Sciences. 21. PMID 32013013 DOI: 10.3390/ijms21030846   
2020 Gomez-Cano L, Gomez-Cano F, Dillon FM, Alers-Velazquez R, Doseff AI, Grotewold E, Gray J. Discovery of modules involved in the biosynthesis and regulation of maize phenolic compounds. Plant Science : An International Journal of Experimental Plant Biology. 291: 110364. PMID 31928683 DOI: 10.1016/j.plantsci.2019.110364   
2020 Takeuchi T, Sears BB, Lindeboom CD, Lin YT, Fekaris N, Zienkiewicz K, Zienkiewicz A, Poliner E, Benning C. Chlamydomonas CHT7 is Required for an Effective Quiescent State by Regulating Nutrient-responsive Cell Cycle Gene Expression. The Plant Cell. PMID 32001503 DOI: 10.1105/tpc.19.00628   
2020 Ahmad B, Yao J, Zhang S, Li X, Zhang X, Yadav V, Wang X. Genome-Wide Characterization and Expression Profiling of GASA Genes during Different Stages of Seed Development in Grapevine ( L.) Predict Their Involvement in Seed Development. International Journal of Molecular Sciences. 21. PMID 32041336 DOI: 10.3390/ijms21031088   
2020 Tiwari JK, Buckseth T, Zinta R, Saraswati A, Singh RK, Rawat S, Dua VK, Chakrabarti SK. Transcriptome analysis of potato shoots, roots and stolons under nitrogen stress. Scientific Reports. 10: 1152. PMID 31980689 DOI: 10.1038/s41598-020-58167-4   
2020 Fu L, Jiang B, Wei J, Liu J, Hu X, Zhang L. Transcriptome analysis of polysaccharide-based microbial flocculant MBFA9 biosynthesis regulated by nitrogen source. Scientific Reports. 10: 2918. PMID 32075995 DOI: 10.1038/s41598-020-59114-z   
2020 Chen J, Qu C, Chang R, Suo J, Yu J, Sun X, Liu G, Xu Z. Genome-wide identification of genes in and their expression under different nitrogen treatments. 3 Biotech. 10: 57. PMID 32015953 DOI: 10.1007/s13205-020-2061-5   
2020 Feitosa-Araujo E, Chaves IS, Florian A, da Fonseca-Pereira P, Apfata JAC, Heyneke E, Medeiros DB, Pires MV, Mettler-Altmann T, Neuhaus HE, Palmieri F, Araújo WL, Obata T, Weber APM, Linka N, et al. Down-regulation of a Mitochondrial NAD+ Transporter (NDT2) Alters Seed Production and Germination in Arabidopsis. Plant & Cell Physiology. PMID 32065636 DOI: 10.1093/pcp/pcaa017   
2020 Zhang J, Wang P, Tian H, Tao Z, Guo T. Transcriptome Analysis of Ice Plant Growth-Promoting Endophytic Bacterium sp. Strain MC1 to Identify the Genes Involved in Salt Tolerance. Microorganisms. 8. PMID 31936448 DOI: 10.3390/microorganisms8010088   
2020 Ferrari C, Shivhare D, Hansen BO, Pasha A, Esteban E, Provart NJ, Kragler F, Fernie AR, Tohge T, Mutwil M. Expression Atlas of Selaginella moellendorffii Provides Insights into the Evolution of Vasculature, Secondary Metabolism, and Roots. The Plant Cell. PMID 31988262 DOI: 10.1105/tpc.19.00780   
2020 Song S, Jiang M, Zhou J, Zhao F, Hou X, Lin Y. Nutrigenomic Role of Acetate and β-Hydroxybutyrate in Bovine Mammary Epithelial Cells. Dna and Cell Biology. PMID 31905020 DOI: 10.1089/dna.2019.4783   
2020 Kusano M, Fukushima A, Tabuchi-Kobayashi M, Funayama K, Kojima S, Maruyama K, Yamamoto YY, Nishizawa T, Kobayashi M, Wakazaki M, Sato M, Toyooka K, Osanai-Kondo K, Utsumi Y, Seki M, et al. Cytosolic GLUTAMINE SYNTHETASE 1;1 modulates metabolism and chloroplast development in roots. Plant Physiology. PMID 32024696 DOI: 10.1104/pp.19.01118   
2020 Karanthamalai J, Chodon A, Chauhan S, Pandi G. DNA N-Methyladenine Modification in Plant Genomes-A Glimpse into Emerging Epigenetic Code. Plants (Basel, Switzerland). 9. PMID 32075056 DOI: 10.3390/plants9020247   
2020 Gonzalez V, Spampinato CP. The mismatch repair protein MSH6 regulates somatic recombination in Arabidopsis thaliana. Dna Repair. 87: 102789. PMID 31945543 DOI: 10.1016/j.dnarep.2020.102789   
2020 Tong X, Zhang H, Wang F, Xue Z, Cao J, Peng C, Guo J. Comparative transcriptome analysis revealed genes involved in the fruiting body development of . Peerj. 8: e8379. PMID 31988806 DOI: 10.7717/peerj.8379   
2020 Gallego-Giraldo L, Liu C, Pose-Albacete S, Pattathil S, Peralta AG, Young J, Westpheling J, Hahn MG, Rao X, Knox JP, De Meester B, Boerjan W, Dixon RA. ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 1 (ADPG1) releases latent defense signals in stems with reduced lignin content. Proceedings of the National Academy of Sciences of the United States of America. PMID 31974310 DOI: 10.1073/pnas.1914422117   
2020 Zhang D, Lin W, Liu Y, Guo H, Wang L, Yang L, Li L, Li D, Tang R. Chronic Microcystin-LR Exposure Induces Abnormal Lipid Metabolism via Endoplasmic Reticulum Stress in Male Zebrafish. Toxins. 12. PMID 32046144 DOI: 10.3390/toxins12020107   
2020 Hu L, Zhang H, Xie C, Wang J, Zhang J, Wang H, Weng Y, Chen P, Li Y. A mutation in CsHD encoding a histidine and aspartic acid domain-containing protein leads to yellow young leaf-1 (yyl-1) in cucumber (Cucumis sativus L.). Plant Science : An International Journal of Experimental Plant Biology. 293: 110407. PMID 32081257 DOI: 10.1016/j.plantsci.2020.110407   
2020 Sokolov SS, Vorobeva MA, Smirnova AI, Smirnova EA, Trushina NI, Galkina KV, Severin FF, Knorre DA. Genes Contribute to Environmental Stress Tolerance but Sensibilize Yeast Cells to Azoles. Frontiers in Microbiology. 11: 38. PMID 32047490 DOI: 10.3389/fmicb.2020.00038   
2020 Wang J, Liu H, Xie G, Cai W, Xu J. Identification of hub genes and key pathways of dietary advanced glycation end products‑induced non‑alcoholic fatty liver disease by bioinformatics analysis and animal experiments. Molecular Medicine Reports. 21: 685-694. PMID 31974594 DOI: 10.3892/mmr.2019.10872   
2020 Chang L, Tong Z, Peng C, Wang D, Kong H, Yang Q, Luo M, Guo A, Xu B. Genome-wide analysis and phosphorylation sites identification of the 14-3-3 gene family and functional characterization of MeGRF3 in cassava. Physiologia Plantarum. PMID 32020618 DOI: 10.1111/ppl.13070   
2020 Zhang S, Chen Y, He X, Du J, Zhang R, Ma Y, Hu X, Zhang Z, Chen Q, Wan XC. Identification of Myb Transcription Factors Regulating Theanine Biosynthesis in Tea Plant Using Omics-Based Gene Co-expression Analysis. Journal of Agricultural and Food Chemistry. PMID 31899636 DOI: 10.1021/acs.jafc.9b06730   
2020 Bai S, Wallis JG, Denolf P, Engelen S, Bengtsson JD, Van Thournout M, Dierickx J, Haesendonckx B, Browse J. The biochemistry of headgroup exchange during triacylglycerol synthesis in canola. The Plant Journal : For Cell and Molecular Biology. PMID 31991038 DOI: 10.1111/tpj.14709   
2020 Tian X, Xie J, Yu J. Physiological and transcriptomic responses of Lanzhou Lily (Lilium davidii, var. unicolor) to cold stress. Plos One. 15: e0227921. PMID 31971962 DOI: 10.1371/journal.pone.0227921   
2020 Cui Y, Su Y, Wang J, Jia B, Wu M, Pei W, Zhang J, Yu J. Genome-Wide Characterization and Analysis of Gene Family in Two Cultivated Allopolyploid Cotton Species: Sequence Variation, Association with Seed Oil Content, and the Role of . International Journal of Molecular Sciences. 21. PMID 32013234 DOI: 10.3390/ijms21030863   
2020 Chen X, Yin Z, Yin Y, Xu C, Wang W, Liu Y, Li T. Effects of Elevated Root-Zone CO on Root Morphology and Nitrogen Metabolism Revealed by Physiological and Transcriptome Analysis in Oriental Melon Seedling Roots. International Journal of Molecular Sciences. 21. PMID 31991847 DOI: 10.3390/ijms21030803   
2020 Zhou HC, Shamala LF, Yi XK, Yan Z, Wei S. Analysis of Terpene Synthase Family Genes in Camellia sinensis with an Emphasis on Abiotic Stress Conditions. Scientific Reports. 10: 933. PMID 31969641 DOI: 10.1038/s41598-020-57805-1   
2020 Mavropoulos Papoudas S, Papanikolaou N, Nikolaou C. Monitoring the prolonged Tnf stimulation in space and time with topological-functional networks. Computational and Structural Biotechnology Journal. 18: 220-229. PMID 32021663 DOI: 10.1016/j.csbj.2020.01.001   
2020 Bannon DI, Bao W, Turner SD, McCain WC, Dennis W, Wolfinger R, Perkins E, Abounader R. Gene expression in mouse muscle over time after nickel pellet implantation. Metallomics : Integrated Biometal Science. PMID 32065191 DOI: 10.1039/c9mt00289h   
2020 Luo R, Zheng Z, Yang C, Zhang X, Cheng L, Su G, Bai C, Li G. Comparative Transcriptome Analysis Provides Insights into the Polyunsaturated Fatty Acid Synthesis Regulation of Transgenic Sheep. International Journal of Molecular Sciences. 21. PMID 32046209 DOI: 10.3390/ijms21031121   
2020 Jost M, Santos DA, Saunders RA, Horlbeck MA, Hawkins JS, Scaria SM, Norman TM, Hussmann JA, Liem CR, Gross CA, Weissman JS. Titrating gene expression using libraries of systematically attenuated CRISPR guide RNAs. Nature Biotechnology. PMID 31932729 DOI: 10.1038/s41587-019-0387-5   
2020 Chang AY, Liao BY. Reduced translational efficiency of eukaryotic genes after duplication events. Molecular Biology and Evolution. PMID 31904835 DOI: 10.1093/molbev/msz309   
2020 Zhao J, Quan P, Liu H, Li L, Qi S, Zhang M, Zhang B, Li H, Zhao R, Ma B, Han M, Zhang H, Xing L. Transcriptomic and metabolic analyses provide new insights into the apple fruit quality decline during long-term cold storage. Journal of Agricultural and Food Chemistry. PMID 32078318 DOI: 10.1021/acs.jafc.9b07107   
2020 Xia Y, Li J, Li S, Khodahemmati S, Ghaffar M, Chen S, Sheng W. Identification of Pathways and Genes in the Process of E6/E7 Induced Carcinogenesis of Esophageal Epithelial Cells. Journal of Medical Virology. PMID 31916268 DOI: 10.1002/jmv.25667   
2020 Zheng Y, Chen X, Wang P, Sun Y, Yue C, Ye N. Genome-wide and expression pattern analysis of JAZ family involved in stress responses and postharvest processing treatments in Camellia sinensis. Scientific Reports. 10: 2792. PMID 32066857 DOI: 10.1038/s41598-020-59675-z   
2020 Ferrer-Bonsoms JA, Cassol I, Fernández-Acín P, Castilla C, Carazo F, Rubio A. ISOGO: Functional annotation of protein-coding splice variants. Scientific Reports. 10: 1069. PMID 31974522 DOI: 10.1038/s41598-020-57974-z   
2020 Kim SH, Kim SW, Lim GH, Lyu JI, Choi HI, Jo YD, Kang SY, Kang BC, Kim JB. Transcriptome analysis to identify candidate genes associated with the yellow-leaf phenotype of a Cymbidium mutant generated by γ-irradiation. Plos One. 15: e0228078. PMID 31995594 DOI: 10.1371/journal.pone.0228078   
2020 Zhou P, Pu T, Gui C, Zhang X, Gong L. Transcriptome Analysis Reveals Biosynthesis of Important Bioactive Constituents and Mechanism of Stem Formation of Dendrobium huoshanense. Scientific Reports. 10: 2857. PMID 32071345 DOI: 10.1038/s41598-020-59737-2   
2020 Li H, Zhang X, Tong B, Wang Y, Yang C. Expression analysis of the BpARF genes in Betula platyphylla under drought stress. Plant Physiology and Biochemistry : Ppb. 148: 273-281. PMID 31986481 DOI: 10.1016/j.plaphy.2020.01.028   
2020 Min KB, Yoon SS. Transcriptome analysis reveals that the RNA polymerase-binding protein DksA1 has pleiotropic functions in . The Journal of Biological Chemistry. PMID 32047111 DOI: 10.1074/jbc.RA119.011692   
2020 Liu J, Zhang C, Zhang B, Sheng Y, Xu W, Luo Y, He X, Huang K. Comprehensive Analysis of the Characteristics and Differences in Adult and Newborn Brown Adipose Tissue (BAT): Newborn BAT Is a More Active/Dynamic BAT. Cells. 9. PMID 31947603 DOI: 10.3390/cells9010201   
2020 Yang Z, Xing J, Wang L, Liu Y, Qu J, Tan Y, Fu X, Lin Q, Deng H, Yu F. Mutations of two FERONIA-like receptor genes enhance rice blast resistance without growth penalty. Journal of Experimental Botany. PMID 31986202 DOI: 10.1093/jxb/erz541   
2020 Hvitfeldt E, Xia C, Siegmund KD, Shibata D, Marjoram P. Epigenetic Conservation Is a Beacon of Function: An Analysis Using Methcon5 Software for Studying Gene Methylation. Jco Clinical Cancer Informatics. 4: 100-107. PMID 32078366 DOI: 10.1200/CCI.19.00109   
2020 Jiang S, Balan B, Assis RAB, Sagawa CHD, Wan X, Han S, Wang L, Zhang L, Zaini PA, Walawage SL, Jacobson A, Lee SH, Moreira LM, Leslie CA, Dandekar AM. Genome-Wide Profiling and Phylogenetic Analysis of the Sugar Transporter Gene Family in Walnut and Their Lack of Responsiveness to pv. Infection. International Journal of Molecular Sciences. 21. PMID 32070009 DOI: 10.3390/ijms21041251   
2020 Zhu C, Zhang S, Zhou C, Chen L, Fu H, Li X, Lin Y, Lai Z, Guo Y. Genome-wide investigation and transcriptional analysis of cytosine-5 DNA methyltransferase and DNA demethylase gene families in tea plant () under abiotic stress and withering processing. Peerj. 8: e8432. PMID 31976183 DOI: 10.7717/peerj.8432   
2020 Abete-Luzi P, Fukushige T, Yun S, Krause MW, Eisenmann DM. New Roles for the Heterochronic Transcription Factor LIN-29 in Cuticle Maintenance and Lipid Metabolism at the Larval-to-Adult Transition in . Genetics. PMID 31974205 DOI: 10.1534/genetics.119.302860   
2020 Wragg D, Liu Q, Lin Z, Riggio V, Pugh CA, Beveridge AJ, Brown H, Hume DA, Harris SE, Deary IJ, Tenesa A, Prendergast JGD. Using regulatory variants to detect gene-gene interactions identifies networks of genes linked to cell immortalisation. Nature Communications. 11: 343. PMID 31953380 DOI: 10.1038/s41467-019-13762-6   
2020 Neilsen BK, Kelly DL, Chakraborty B, Kim HS, White MA, Lewis RE, Fisher KW. High-throughput identification of protein functional similarities using a gene-expression-based siRNA screen. Scientific Data. 7: 27. PMID 31964871 DOI: 10.1038/s41597-020-0365-2   
2020 Han B, Xu H, Feng Y, Xu W, Cui Q, Liu A. Genomic Characterization and Expressional Profiles of Autophagy-Related Genes () in Oilseed Crop Castor Bean (). International Journal of Molecular Sciences. 21. PMID 31952322 DOI: 10.3390/ijms21020562