| Year |
Citation |
Score |
| 2022 |
Hasenahuer MA, Sanchis-Juan A, Laskowski RA, Baker JA, Stephenson JD, Orengo CA, Lucy Raymond F, Thornton JM. Mapping the Constrained Coding Regions in the human genome to their corresponding proteins. Journal of Molecular Biology. 167892. PMID 36410474 DOI: 10.1016/j.jmb.2022.167892 |
0.642 |
|
| 2022 |
Akdel M, Pires DEV, Pardo EP, Jänes J, Zalevsky AO, Mészáros B, Bryant P, Good LL, Laskowski RA, Pozzati G, Shenoy A, Zhu W, Kundrotas P, Serra VR, Rodrigues CHM, et al. A structural biology community assessment of AlphaFold2 applications. Nature Structural & Molecular Biology. PMID 36344848 DOI: 10.1038/s41594-022-00849-w |
0.674 |
|
| 2021 |
Laskowski RA, Thornton JM. PDBsum extras: SARS-CoV-2 and AlphaFold models. Protein Science : a Publication of the Protein Society. PMID 34779073 DOI: 10.1002/pro.4238 |
0.693 |
|
| 2021 |
Thornton JM, Laskowski RA, Borkakoti N. AlphaFold heralds a data-driven revolution in biology and medicine. Nature Medicine. 27: 1666-1669. PMID 34642488 DOI: 10.1038/s41591-021-01533-0 |
0.496 |
|
| 2021 |
Magraner-Pardo L, Laskowski RA, Pons T, Thornton JM. A computational and structural analysis of germline and somatic variants affecting the DDR mechanism, and their impact on human diseases. Scientific Reports. 11: 14268. PMID 34253785 DOI: 10.1038/s41598-021-93715-6 |
0.618 |
|
| 2021 |
Ochoa R, Laskowski RA, Thornton JM, Cossio P. Impact of Structural Observables From Simulations to Predict the Effect of Single-Point Mutations in MHC Class II Peptide Binders. Frontiers in Molecular Biosciences. 8: 636562. PMID 34222328 DOI: 10.3389/fmolb.2021.636562 |
0.543 |
|
| 2020 |
Ochoa R, Magnitov M, Laskowski RA, Cossio P, Thornton JM. An automated protocol for modelling peptide substrates to proteases. Bmc Bioinformatics. 21: 586. PMID 33375946 DOI: 10.1186/s12859-020-03931-6 |
0.586 |
|
| 2019 |
Laskowski RA, Stephenson JD, Sillitoe I, Orengo CA, Thornton JM. VarSite: disease variants and protein structure. Protein Science : a Publication of the Protein Society. PMID 31606900 DOI: 10.1002/Pro.3746 |
0.669 |
|
| 2019 |
Stephenson JD, Laskowski RA, Nightingale A, Hurles ME, Thornton JM. VarMap: a web tool for mapping genomic coordinates to protein sequence and structure and retrieving protein structural annotations. Bioinformatics (Oxford, England). PMID 31192369 DOI: 10.1093/Bioinformatics/Btz482 |
0.67 |
|
| 2017 |
Suri M, Evers JMG, Laskowski RA, O'Brien S, Baker K, Clayton-Smith J, Dabir T, Josifova D, Joss S, Kerr B, Kraus A, McEntagart M, Morton J, Smith A, Splitt M, et al. Protein structure and phenotypic analysis of pathogenic and population missense variants in STXBP1. Molecular Genetics & Genomic Medicine. 5: 495-507. PMID 28944233 DOI: 10.1002/Mgg3.304 |
0.618 |
|
| 2017 |
Laskowski RA, Jabƚońska J, Pravda L, Vařeková RS, Thornton JM. PDBsum: Structural summaries of PDB entries. Protein Science : a Publication of the Protein Society. PMID 28875543 DOI: 10.1002/Pro.3289 |
0.685 |
|
| 2017 |
Laskowski RA. The ProFunc Function Prediction Server. Methods in Molecular Biology (Clifton, N.J.). 1611: 75-95. PMID 28451973 DOI: 10.1007/978-1-4939-7015-5_7 |
0.437 |
|
| 2017 |
Evers JM, Laskowski RA, Bertolli M, Clayton-Smith J, Deshpande C, Eason J, Elmslie F, Flinter F, Gardiner C, Hurst JA, Kingston H, Kini U, Lampe AK, Lim D, Male A, et al. Structural analysis of pathogenic mutations in the DYRK1A gene in patients with developmental disorders. Human Molecular Genetics. PMID 28053047 DOI: 10.1093/Hmg/Ddw409 |
0.563 |
|
| 2016 |
Mascotti ML, Ayub MJ, Furnham N, Thornton JM, Laskowski RA. Chopping and changing: The evolution of the flavin-dependent monooxygenases. Journal of Molecular Biology. PMID 27423402 DOI: 10.1016/J.Jmb.2016.07.003 |
0.567 |
|
| 2016 |
Ryu J, Lee M, Cha J, Laskowski RA, Ryu SE, Kim DS. BetaSCPWeb: side-chain prediction for protein structures using Voronoi diagrams and geometry prioritization. Nucleic Acids Research. PMID 27151195 DOI: 10.1093/nar/gkw368 |
0.311 |
|
| 2016 |
Laskowski RA. Protein Structure Databases. Methods in Molecular Biology (Clifton, N.J.). 1415: 31-53. PMID 27115626 DOI: 10.1007/978-1-4939-3572-7_2 |
0.439 |
|
| 2016 |
Laskowski RA, Tyagi N, Johnson D, Joss S, Kinning E, McWilliam C, Splitt M, Thornton JM, Firth HV, Wright CF. Integrating population variation and protein structural analysis to improve clinical interpretation of missense variation: application to the WD40 domain. Human Molecular Genetics. PMID 26740553 DOI: 10.1093/Hmg/Ddv625 |
0.596 |
|
| 2015 |
Laskowski RA, Thornton JM. Proteins: interaction at a distance. Iucrj. 2: 609-610. PMID 26594367 DOI: 10.1107/S2052252515020217 |
0.619 |
|
| 2015 |
Sillitoe I, Lewis TE, Cuff A, Das S, Ashford P, Dawson NL, Furnham N, Laskowski RA, Lee D, Lees JG, Lehtinen S, Studer RA, Thornton J, Orengo CA. CATH: comprehensive structural and functional annotations for genome sequences. Nucleic Acids Research. 43: D376-81. PMID 25348408 DOI: 10.1093/Nar/Gku947 |
0.629 |
|
| 2015 |
Laskowski RA, Thornton JM. Proteins: Interaction at a distance Iucrj. 2: 609-610. DOI: 10.1107/S2052252515020217 |
0.609 |
|
| 2014 |
de Beer TA, Berka K, Thornton JM, Laskowski RA. PDBsum additions. Nucleic Acids Research. 42: D292-6. PMID 24153109 DOI: 10.1093/nar/gkt940 |
0.682 |
|
| 2014 |
Laskowski R, Beer Td. Sequence of a Protein Dictionary of Bioinformatics and Computational Biology. DOI: 10.1002/9780471650126.Dob0669.Pub2 |
0.427 |
|
| 2013 |
de Beer TA, Laskowski RA, Parks SL, Sipos B, Goldman N, Thornton JM. Amino acid changes in disease-associated variants differ radically from variants observed in the 1000 genomes project dataset. Plos Computational Biology. 9: e1003382. PMID 24348229 DOI: 10.1371/Journal.Pcbi.1003382 |
0.554 |
|
| 2013 |
de Beer TA, Laskowski RA, Duban ME, Chan AW, Anderson WF, Thornton JM. LigSearch: a knowledge-based web server to identify likely ligands for a protein target. Acta Crystallographica. Section D, Biological Crystallography. 69: 2395-402. PMID 24311580 DOI: 10.1107/S0907444913022294 |
0.646 |
|
| 2013 |
Furnham N, Laskowski RA, Thornton JM. Abstracting knowledge from the protein data bank. Biopolymers. 99: 183-8. PMID 23023892 DOI: 10.1002/Bip.22107 |
0.672 |
|
| 2013 |
Laskowski RA, Swaminathan GJ. Problems of Protein Three-Dimensional Structures Reference Module in Chemistry, Molecular Sciences and Chemical Engineering. DOI: 10.1016/B978-0-12-409547-2.02535-X |
0.335 |
|
| 2012 |
Furnham N, Sillitoe I, Holliday GL, Cuff AL, Laskowski RA, Orengo CA, Thornton JM. Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies. Plos Computational Biology. 8: e1002403. PMID 22396634 DOI: 10.1371/Journal.Pcbi.1002403 |
0.579 |
|
| 2012 |
Furnham N, Sillitoe I, Holliday GL, Cuff AL, Rahman SA, Laskowski RA, Orengo CA, Thornton JM. FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies. Nucleic Acids Research. 40: D776-82. PMID 22006843 DOI: 10.1093/Nar/Gkr852 |
0.606 |
|
| 2011 |
Anand P, Sankaran S, Mukherjee S, Yeturu K, Laskowski R, Bhardwaj A, Bhagavat R, Brahmachari SK, Chandra N. Structural annotation of Mycobacterium tuberculosis proteome. Plos One. 6: e27044. PMID 22073123 DOI: 10.1371/Journal.Pone.0027044 |
0.484 |
|
| 2011 |
Laskowski RA, Swindells MB. LigPlot+: multiple ligand-protein interaction diagrams for drug discovery. Journal of Chemical Information and Modeling. 51: 2778-86. PMID 21919503 DOI: 10.1021/ci200227u |
0.35 |
|
| 2011 |
Laskowski RA. Protein structure databases. Molecular Biotechnology. 48: 183-98. PMID 21225378 DOI: 10.1007/s12033-010-9372-4 |
0.439 |
|
| 2011 |
Lee D, de Beer TA, Laskowski RA, Thornton JM, Orengo CA. 1,000 structures and more from the MCSG. Bmc Structural Biology. 11: 2. PMID 21219649 DOI: 10.1186/1472-6807-11-2 |
0.658 |
|
| 2010 |
Laskowski RA. Protein structure databases. Methods in Molecular Biology (Clifton, N.J.). 609: 59-82. PMID 20221913 DOI: 10.1007/978-1-60327-241-4_4 |
0.439 |
|
| 2010 |
Kahraman A, Morris RJ, Laskowski RA, Favia AD, Thornton JM. On the diversity of physicochemical environments experienced by identical ligands in binding pockets of unrelated proteins. Proteins. 78: 1120-36. PMID 19927322 DOI: 10.1002/Prot.22633 |
0.616 |
|
| 2009 |
Capra JA, Laskowski RA, Thornton JM, Singh M, Funkhouser TA. Predicting protein ligand binding sites by combining evolutionary sequence conservation and 3D structure. Plos Computational Biology. 5: e1000585. PMID 19997483 DOI: 10.1371/Journal.Pcbi.1000585 |
0.669 |
|
| 2009 |
Laskowski RA, Thornton JM, Sternberg MJ. The fine details of evolution. Biochemical Society Transactions. 37: 723-6. PMID 19614583 DOI: 10.1042/Bst0370723 |
0.62 |
|
| 2009 |
Laskowski RA, Gerick F, Thornton JM. The structural basis of allosteric regulation in proteins. Febs Letters. 583: 1692-8. PMID 19303011 DOI: 10.1016/J.Febslet.2009.03.019 |
0.67 |
|
| 2009 |
Talavera D, Laskowski RA, Thornton JM. WSsas: a web service for the annotation of functional residues through structural homologues. Bioinformatics (Oxford, England). 25: 1192-4. PMID 19251774 DOI: 10.1093/Bioinformatics/Btp116 |
0.648 |
|
| 2009 |
Laskowski RA. PDBsum new things. Nucleic Acids Research. 37: D355-9. PMID 18996896 DOI: 10.1093/nar/gkn860 |
0.426 |
|
| 2009 |
Sternberg M, Thornton J, Laskowski R. Protein evolution - Sequence, structure and systems Biochemist. 31: 52-52. |
0.641 |
|
| 2008 |
Laskowski RA, Thornton JM. Understanding the molecular machinery of genetics through 3D structures. Nature Reviews. Genetics. 9: 141-51. PMID 18160966 DOI: 10.1038/Nrg2273 |
0.647 |
|
| 2007 |
Laskowski RA. Enhancing the functional annotation of PDB structures in PDBsum using key figures extracted from the literature. Bioinformatics (Oxford, England). 23: 1824-7. PMID 17384425 DOI: 10.1093/bioinformatics/btm085 |
0.324 |
|
| 2007 |
Tress ML, Martelli PL, Frankish A, Reeves GA, Wesselink JJ, Yeats C, Olason PI, Albrecht M, Hegyi H, Giorgetti A, Raimondo D, Lagarde J, Laskowski RA, López G, Sadowski MI, et al. The implications of alternative splicing in the ENCODE protein complement. Proceedings of the National Academy of Sciences of the United States of America. 104: 5495-500. PMID 17372197 DOI: 10.1073/Pnas.0700800104 |
0.601 |
|
| 2007 |
Kahraman A, Morris RJ, Laskowski RA, Thornton JM. Shape variation in protein binding pockets and their ligands. Journal of Molecular Biology. 368: 283-301. PMID 17337005 DOI: 10.1016/J.Jmb.2007.01.086 |
0.581 |
|
| 2007 |
Watson JD, Sanderson S, Ezersky A, Savchenko A, Edwards A, Orengo C, Joachimiak A, Laskowski RA, Thornton JM. Towards fully automated structure-based function prediction in structural genomics: a case study. Journal of Molecular Biology. 367: 1511-22. PMID 17316683 DOI: 10.1016/J.Jmb.2007.01.063 |
0.673 |
|
| 2007 |
Kahraman A, Morris RJ, Laskowski RA, Thornton JM. Variation of geometrical and physicochemical properties in protein binding pockets and their ligands Bmc Bioinformatics. 8. DOI: 10.1186/1471-2105-8-S8-S1 |
0.574 |
|
| 2006 |
Albeck S, Alzari P, Andreini C, Banci L, Berry IM, Bertini I, Cambillau C, Canard B, Carter L, Cohen SX, Diprose JM, Dym O, Esnouf RM, Felder C, Ferron F, ... ... Laskowski RA, et al. SPINE bioinformatics and data-management aspects of high-throughput structural biology. Acta Crystallographica. Section D, Biological Crystallography. 62: 1184-95. PMID 17001095 DOI: 10.1107/S090744490602991X |
0.558 |
|
| 2006 |
Zhang R, Skarina T, Evdokimova E, Edwards A, Savchenko A, Laskowski R, Cuff ME, Joachimiak A. Structure of SAICAR synthase from Thermotoga maritima at 2.2 angstroms reveals an unusual covalent dimer. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 62: 335-9. PMID 16582479 DOI: 10.1107/S1744309106009651 |
0.507 |
|
| 2006 |
Glaser F, Morris RJ, Najmanovich RJ, Laskowski RA, Thornton JM. A method for localizing ligand binding pockets in protein structures. Proteins. 62: 479-88. PMID 16304646 DOI: 10.1002/Prot.20769 |
0.64 |
|
| 2005 |
Laskowski RA, Watson JD, Thornton JM. Protein function prediction using local 3D templates. Journal of Molecular Biology. 351: 614-26. PMID 16019027 DOI: 10.1016/J.Jmb.2005.05.067 |
0.676 |
|
| 2005 |
Laskowski RA, Watson JD, Thornton JM. ProFunc: a server for predicting protein function from 3D structure. Nucleic Acids Research. 33: W89-93. PMID 15980588 DOI: 10.1093/Nar/Gki414 |
0.7 |
|
| 2005 |
Watson JD, Laskowski RA, Thornton JM. Predicting protein function from sequence and structural data. Current Opinion in Structural Biology. 15: 275-84. PMID 15963890 DOI: 10.1016/J.Sbi.2005.04.003 |
0.66 |
|
| 2005 |
Laskowski RA, Chistyakov VV, Thornton JM. PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids. Nucleic Acids Research. 33: D266-8. PMID 15608193 DOI: 10.1093/Nar/Gki001 |
0.657 |
|
| 2005 |
Joachimiak A, Zhang R, Kim Y, Osipiuk J, Cuff M, Chang C, Nocek B, Binkowski A, Cymborowski M, Lazarski K, Chruszcz M, Laskowski R, Thornton J, Duke N, Rotella F, et al. Establishing high-throughput protein structure determination pipeline for structural genomics Acta Crystallographica Section a Foundations of Crystallography. 61: c259-c259. DOI: 10.1107/S0108767305088926 |
0.684 |
|
| 2004 |
Savchenko A, Skarina T, Evdokimova E, Watson JD, Laskowski R, Arrowsmith CH, Edwards AM, Joachimiak A, Zhang RG. X-ray crystal structure of CutA from Thermotoga maritima at 1.4 A resolution. Proteins. 54: 162-5. PMID 14705033 DOI: 10.1002/Prot.10585 |
0.472 |
|
| 2004 |
Laskowski R, Beer Td. Secondary Structure of Protein Dictionary of Bioinformatics and Computational Biology. DOI: 10.1002/9780471650126.Dob0655.Pub2 |
0.532 |
|
| 2003 |
Laskowski RA, Watson JD, Thornton JM. From protein structure to biochemical function? Journal of Structural and Functional Genomics. 4: 167-77. PMID 14649301 DOI: 10.1023/A:1026127927612 |
0.674 |
|
| 2003 |
Steward RE, MacArthur MW, Laskowski RA, Thornton JM. Molecular basis of inherited diseases: a structural perspective. Trends in Genetics : Tig. 19: 505-13. PMID 12957544 DOI: 10.1016/S0168-9525(03)00195-1 |
0.628 |
|
| 2003 |
Watson JD, Todd AE, Bray J, Laskowski RA, Edwards A, Joachimiak A, Orengo CA, Thornton JM. Target selection and determination of function in structural genomics. Iubmb Life. 55: 249-55. PMID 12880206 DOI: 10.1080/1521654031000123385 |
0.677 |
|
| 2003 |
Sanishvili R, Yakunin AF, Laskowski RA, Skarina T, Evdokimova E, Doherty-Kirby A, Lajoie GA, Thornton JM, Arrowsmith CH, Savchenko A, Joachimiak A, Edwards AM. Integrating structure, bioinformatics, and enzymology to discover function: BioH, a new carboxylesterase from Escherichia coli. The Journal of Biological Chemistry. 278: 26039-45. PMID 12732651 DOI: 10.1074/Jbc.M303867200 |
0.656 |
|
| 2003 |
Zhang RG, Duke N, Laskowski R, Evdokimova E, Skarina T, Edwards A, Joachimiak A, Savchenko A. Conserved protein YecM from Escherichia coli shows structural homology to metal-binding isomerases and oxygenases. Proteins. 51: 311-4. PMID 12660999 DOI: 10.1002/Prot.10307 |
0.459 |
|
| 2003 |
Wu RY, Zhang RG, Zagnitko O, Dementieva I, Maltzev N, Watson JD, Laskowski R, Gornicki P, Joachimiak A. Crystal structure of Enterococcus faecalis SlyA-like transcriptional factor. The Journal of Biological Chemistry. 278: 20240-4. PMID 12649270 DOI: 10.1074/Jbc.M300292200 |
0.446 |
|
| 2002 |
Laskowski RA, Chan AW. Bioinformatics and protein design. Current Pharmaceutical Biotechnology. 3: 317-27. PMID 12463415 DOI: 10.2174/1389201023378157 |
0.475 |
|
| 2002 |
Kim Y, Skarina T, Beasley S, Laskowski R, Arrowsmith C, Joachimiak A, Edwards A, Savchenko A. Crystal structure of Escherichia coli EC1530, a glyoxylate induced protein YgbM. Proteins. 48: 427-30. PMID 12112708 DOI: 10.1002/Prot.10160 |
0.439 |
|
| 2002 |
Albà MM, Laskowski RA, Hancock JM. Detecting cryptically simple protein sequences using the SIMPLE algorithm. Bioinformatics (Oxford, England). 18: 672-8. PMID 12050063 DOI: 10.1093/Bioinformatics/18.5.672 |
0.36 |
|
| 2002 |
Thornton J, Laskowski RA, Bartlett G, Porter C, Todd A, Orengo C. Enzymes: evolution of function from a structural perspective Acta Crystallographica Section a Foundations of Crystallography. 58: c13-c13. DOI: 10.1107/S0108767302085616 |
0.578 |
|
| 2001 |
Nobeli I, Laskowski RA, Valdar WS, Thornton JM. On the molecular discrimination between adenine and guanine by proteins. Nucleic Acids Research. 29: 4294-309. PMID 11691917 DOI: 10.1093/Nar/29.21.4294 |
0.648 |
|
| 2001 |
Osipiuk J, Górnicki P, Maj L, Dementieva I, Laskowski R, Joachimiak A. Streptococcus pneumonia YlxR at 1.35 A shows a putative new fold. Acta Crystallographica. Section D, Biological Crystallography. 57: 1747-51. PMID 11679764 DOI: 10.1107/S0907444901014019 |
0.529 |
|
| 2001 |
Luscombe NM, Laskowski RA, Thornton JM. Amino acid-base interactions: a three-dimensional analysis of protein-DNA interactions at an atomic level. Nucleic Acids Research. 29: 2860-74. PMID 11433033 DOI: 10.1093/Nar/29.13.2860 |
0.589 |
|
| 2001 |
Laskowski RA. PDBsum: summaries and analyses of PDB structures. Nucleic Acids Research. 29: 221-2. PMID 11125097 |
0.481 |
|
| 1999 |
Mitchell JBO, Laskowski RA, Alex A, Forster MJ, Thornton JM. BLEEP?potential of mean force describing protein-ligand interactions: II. Calculation of binding energies and comparison with experimental data Journal of Computational Chemistry. 20: 1177-1185. DOI: 10.1002/(Sici)1096-987X(199908)20:11<1177::Aid-Jcc8>3.0.Co;2-0 |
0.575 |
|
| 1998 |
Luscombe NM, Laskowski RA, Westhead DR, Milburn D, Jones S, Karmirantzou M, Thornton JM. New tools and resources for analysing protein structures and their interactions. Acta Crystallographica. Section D, Biological Crystallography. 54: 1132-8. PMID 10089489 DOI: 10.1107/S0907444998007318 |
0.705 |
|
| 1998 |
Milburn D, Laskowski RA, Thornton JM. Sequences annotated by structure: a tool to facilitate the use of structural information in sequence analysis. Protein Engineering. 11: 855-9. PMID 9862203 DOI: 10.1093/Protein/11.10.855 |
0.652 |
|
| 1998 |
Laskowski RA, MacArthur MW, Thornton JM. Validation of protein models derived from experiment. Current Opinion in Structural Biology. 8: 631-9. PMID 9818269 DOI: 10.1016/S0959-440X(98)80156-5 |
0.598 |
|
| 1998 |
Zuccotto F, Martin AC, Laskowski RA, Thornton JM, Gilbert IH. Dihydrofolate reductase: a potential drug target in trypanosomes and leishmania. Journal of Computer-Aided Molecular Design. 12: 241-57. PMID 9749368 DOI: 10.1023/A:1016085005275 |
0.544 |
|
| 1998 |
Martin AC, Orengo CA, Hutchinson EG, Jones S, Karmirantzou M, Laskowski RA, Mitchell JB, Taroni C, Thornton JM. Protein folds and functions. Structure (London, England : 1993). 6: 875-84. PMID 9687369 DOI: 10.1016/S0969-2126(98)00089-6 |
0.677 |
|
| 1997 |
Laskowski RA, Hutchinson EG, Michie AD, Wallace AC, Jones ML, Thornton JM. PDBsum: a Web-based database of summaries and analyses of all PDB structures. Trends in Biochemical Sciences. 22: 488-90. PMID 9433130 DOI: 10.1016/S0968-0004(97)01140-7 |
0.597 |
|
| 1997 |
Luscombe NM, Laskowski RA, Thornton JM. NUCPLOT: a program to generate schematic diagrams of protein-nucleic acid interactions. Nucleic Acids Research. 25: 4940-5. PMID 9396800 DOI: 10.1093/Nar/25.24.4940 |
0.644 |
|
| 1997 |
Mitchell JB, Laskowski RA, Thornton JM. Non-randomness in side-chain packing: the distribution of interplanar angles. Proteins. 29: 370-80. PMID 9365991 DOI: 10.1002/(Sici)1097-0134(199711)29:3<370::Aid-Prot10>3.0.Co;2-K |
0.531 |
|
| 1996 |
Laskowski RA, Rullmannn JA, MacArthur MW, Kaptein R, Thornton JM. AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR. Journal of Biomolecular Nmr. 8: 477-86. PMID 9008363 DOI: 10.1007/Bf00228148 |
0.625 |
|
| 1996 |
Laskowski RA, Luscombe NM, Swindells MB, Thornton JM. Protein clefts in molecular recognition and function. Protein Science : a Publication of the Protein Society. 5: 2438-52. PMID 8976552 DOI: 10.1002/Pro.5560051206 |
0.645 |
|
| 1996 |
Wallace AC, Laskowski RA, Thornton JM. Derivation of 3D coordinate templates for searching structural databases: application to Ser-His-Asp catalytic triads in the serine proteinases and lipases. Protein Science : a Publication of the Protein Society. 5: 1001-13. PMID 8762132 DOI: 10.1002/Pro.5560050603 |
0.689 |
|
| 1996 |
Wallace AC, Laskowski RA, Singh J, Thornton JM. Molecular recognition by proteins: protein-ligand interactions from a structural perspective. Biochemical Society Transactions. 24: 280-4. PMID 8674687 DOI: 10.1042/Bst0240280 |
0.676 |
|
| 1996 |
Laskowski RA, Thornton JM, Humblet C, Singh J. X-SITE: use of empirically derived atomic packing preferences to identify favourable interaction regions in the binding sites of proteins. Journal of Molecular Biology. 259: 175-201. PMID 8648645 DOI: 10.1006/Jmbi.1996.0311 |
0.62 |
|
| 1996 |
Gorinsky B, Laskowski RA, Lee DA, Bomford A. Conformational analysis of pentapeptide sequences matching a proposed recognition motif for lysosomal degradation. Biochimica Et Biophysica Acta. 1293: 243-53. PMID 8620036 DOI: 10.1016/0167-4838(95)00256-1 |
0.327 |
|
| 1996 |
Thornton JM, Hutchinson EG, Jones S, Laskowski RA, MacArthur MW, Michie A, Orengo CM. Protein structures: their validation fold classification and interactions Acta Crystallographica Section a Foundations of Crystallography. 52: C6-C6. DOI: 10.1107/S0108767396098789 |
0.661 |
|
| 1995 |
Wallace AC, Laskowski RA, Thornton JM. LIGPLOT: a program to generate schematic diagrams of protein-ligand interactions. Protein Engineering. 8: 127-34. PMID 7630882 DOI: 10.1093/Protein/8.2.127 |
0.607 |
|
| 1994 |
MacArthur MW, Laskowski RA, Thornton JM. Knowledge-based validation of protein structure coordinates derived by X-ray crystallography and NMR spectroscopy Current Opinion in Structural Biology. 4: 731-737. DOI: 10.1016/S0959-440X(94)90172-4 |
0.625 |
|
| 1993 |
Laskowski RA, Moss DS, Thornton JM. Main-chain bond lengths and bond angles in protein structures. Journal of Molecular Biology. 231: 1049-67. PMID 8515464 DOI: 10.1006/Jmbi.1993.1351 |
0.579 |
|
| 1993 |
Laskowski RA, MacArthur MW, Moss DS, Thornton JM. PROCHECK: a program to check the stereochemical quality of protein structures Journal of Applied Crystallography. 26: 283-291. DOI: 10.1107/S0021889892009944 |
0.641 |
|
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