Year |
Citation |
Score |
2023 |
Berry MA, Andrianova EP, Zhulin IB. Diverse domain architectures of CheA histidine kinase, a central component of bacterial and archaeal chemosensory systems. Microbiology Spectrum. e0346423. PMID 38038435 DOI: 10.1128/spectrum.03464-23 |
0.777 |
|
2023 |
Monteagudo-Cascales E, Gumerov VM, Fernández M, Matilla MA, Gavira JA, Zhulin IB, Krell T. Ubiquitous purine sensor modulates diverse signal transduction pathways in bacteria. Biorxiv : the Preprint Server For Biology. PMID 37961346 DOI: 10.1101/2023.10.26.564149 |
0.721 |
|
2023 |
Cerna-Vargas JP, Gumerov VM, Krell T, Zhulin IB. Amine-recognizing domain in diverse receptors from bacteria and archaea evolved from the universal amino acid sensor. Proceedings of the National Academy of Sciences of the United States of America. 120: e2305837120. PMID 37819981 DOI: 10.1073/pnas.2305837120 |
0.723 |
|
2023 |
Gumerov VM, Ulrich LE, Zhulin IB. MiST 4.0: a new release of the microbial signal transduction database, now with a metagenomic component. Nucleic Acids Research. PMID 37791884 DOI: 10.1093/nar/gkad847 |
0.812 |
|
2023 |
Berry MA, Andrianova EP, Zhulin IB. Diverse domain architectures of CheA histidine kinase, a central component of bacterial and archaeal chemosensory systems. Biorxiv : the Preprint Server For Biology. PMID 37790397 DOI: 10.1101/2023.09.19.558490 |
0.784 |
|
2023 |
Xing J, Gumerov VM, Zhulin IB. Origin and functional diversification of PAS domain, a ubiquitous intracellular sensor. Science Advances. 9: eadi4517. PMID 37647406 DOI: 10.1126/sciadv.adi4517 |
0.732 |
|
2023 |
Das A, Subrahmanian N, Gabilly ST, Andrianova EP, Zhulin IB, Motohashi K, Hamel PP. Two disulfide-reducing pathways are required for the maturation of plastid c-type cytochromes in Chlamydomonas reinhardtii. Genetics. PMID 37595062 DOI: 10.1093/genetics/iyad155 |
0.736 |
|
2023 |
Andrianova EP, Marmion RA, Shvartsman SY, Zhulin IB. Evolutionary history of MEK1 illuminates the nature of deleterious mutations. Proceedings of the National Academy of Sciences of the United States of America. 120: e2304184120. PMID 37579140 DOI: 10.1073/pnas.2304184120 |
0.731 |
|
2023 |
Demey LM, Gumerov VM, Xing J, Zhulin IB, DiRita VJ. Transmembrane Transcription Regulators Are Widespread in Bacteria and Archaea. Microbiology Spectrum. e0026623. PMID 37154724 DOI: 10.1128/spectrum.00266-23 |
0.699 |
|
2023 |
Cerna-Vargas JP, Gumerov VM, Krell T, Zhulin IB. Amine recognizing domain in diverse receptors from bacteria and archaea evolved from the universal amino acid sensor. Biorxiv : the Preprint Server For Biology. PMID 37066253 DOI: 10.1101/2023.04.06.535858 |
0.737 |
|
2023 |
Page KM, Gumerov VM, Dahimene S, Zhulin IB, Dolphin AC. The importance of cache domains in αδ proteins and the basis for their gabapentinoid selectivity. Channels (Austin, Tex.). 17: 2167563. PMID 36735378 DOI: 10.1080/19336950.2023.2167563 |
0.697 |
|
2023 |
Gavira JA, Rico-Jiménez M, Ortega Á, Petukhova NV, Bug DS, Castellví A, Porozov YB, Zhulin IB, Krell T, Matilla MA. Emergence of an Auxin Sensing Domain in Plant-Associated Bacteria. Mbio. 14: e0336322. PMID 36602305 DOI: 10.1128/mbio.03363-22 |
0.333 |
|
2022 |
Elgamoudi BA, Andrianova EP, Haselhorst T, Day CJ, Hartley-Tassell LE, King RM, Najnin T, Zhulin IB, Korolik V. Diverse Sensory Repertoire of Paralogous Chemoreceptors Tlp2, Tlp3, and Tlp4 in . Microbiology Spectrum. e0364622. PMID 36374080 DOI: 10.1128/spectrum.03646-22 |
0.764 |
|
2022 |
Xing J, Gumerov VM, Zhulin IB. Photoactive Yellow Protein Represents a Distinct, Evolutionarily Novel Family of PAS Domains. Journal of Bacteriology. e0030022. PMID 36197090 DOI: 10.1128/jb.00300-22 |
0.743 |
|
2022 |
Matilla MA, Monteagudo-Cascales E, Cerna-Vargas JP, Gumerov VM, Zhulin IB, Krell T. Is it possible to predict signal molecules that are recognized by bacterial receptors? Environmental Microbiology. PMID 36054735 DOI: 10.1111/1462-2920.16143 |
0.672 |
|
2022 |
Popp PF, Gumerov VM, Andrianova EP, Bewersdorf L, Mascher T, Zhulin IB, Wolf D. Phyletic Distribution and Diversification of the Phage Shock Protein Stress Response System in Bacteria and Archaea. Msystems. e0134821. PMID 35604119 DOI: 10.1128/msystems.01348-21 |
0.811 |
|
2022 |
Gumerov VM, Andrianova EP, Matilla MA, Page KM, Monteagudo-Cascales E, Dolphin AC, Krell T, Zhulin IB. Amino acid sensor conserved from bacteria to humans. Proceedings of the National Academy of Sciences of the United States of America. 119: e2110415119. PMID 35238638 DOI: 10.1073/pnas.2110415119 |
0.784 |
|
2022 |
Gumerov VM, Zhulin IB. Correction to 'TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses'. Nucleic Acids Research. 50: 1795. PMID 35100406 DOI: 10.1093/nar/gkac034 |
0.708 |
|
2021 |
Lee BH, Wang R, Moberg IM, Reeder SH, Amom P, Tan MH, Amstutz K, Chandna P, Helton A, Andrianova EP, Zhulin IB, Dobritsa AA. A species-specific functional module controls formation of pollen apertures. Nature Plants. PMID 34183783 DOI: 10.1038/s41477-021-00951-9 |
0.752 |
|
2021 |
Gumerov VM, Andrianova EP, Zhulin IB. Diversity of bacterial chemosensory systems. Current Opinion in Microbiology. 61: 42-50. PMID 33684668 DOI: 10.1016/j.mib.2021.01.016 |
0.819 |
|
2021 |
Elgamoudi BA, Andrianova EP, Shewell LK, Day CJ, King RM, Taha, Rahman H, Hartley-Tassell LE, Zhulin IB, Korolik V. The chemoreceptor Tlp10 has a bimodal ligand-binding domain and specificity for multiple classes of chemoeffectors. Science Signaling. 14. PMID 33402336 DOI: 10.1126/scisignal.abc8521 |
0.782 |
|
2020 |
Wang B, Gumerov VM, Andrianova EP, Zhulin IB, Artsimovitch I. Origins and Molecular Evolution of the NusG Paralog RfaH. Mbio. 11. PMID 33109766 DOI: 10.1128/mBio.02717-20 |
0.805 |
|
2020 |
Gumerov VM, Zhulin IB. TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses. Nucleic Acids Research. PMID 32282909 DOI: 10.1093/Nar/Gkaa243 |
0.703 |
|
2020 |
Gavira JA, Gumerov VM, Rico-Jiménez M, Petukh M, Upadhyay AA, Ortega A, Matilla MA, Zhulin IB, Krell T. How Bacterial Chemoreceptors Evolve Novel Ligand Specificities. Mbio. 11. PMID 31964737 DOI: 10.1128/Mbio.03066-19 |
0.789 |
|
2019 |
Gumerov VM, Ortega DR, Adebali O, Ulrich LE, Zhulin IB. MiST 3.0: an updated microbial signal transduction database with an emphasis on chemosensory systems. Nucleic Acids Research. PMID 31754718 DOI: 10.1093/Nar/Gkz988 |
0.813 |
|
2019 |
Muok AR, Deng Y, Gumerov VM, Chong JE, DeRosa JR, Kurniyati K, Coleman RE, Lancaster KM, Li C, Zhulin IB, Crane BR. A di-iron protein recruited as an Fe[II] and oxygen sensor for bacterial chemotaxis functions by stabilizing an iron-peroxy species. Proceedings of the National Academy of Sciences of the United States of America. PMID 31270241 DOI: 10.1073/Pnas.1904234116 |
0.668 |
|
2019 |
Huang Z, Wang YH, Zhu HZ, Andrianova EP, Jiang CY, Li D, Ma L, Feng J, Liu ZP, Xiang H, Zhulin IB, Liu SJ. Cross Talk between Chemosensory Pathways That Modulate Chemotaxis and Biofilm Formation. Mbio. 10. PMID 30808696 DOI: 10.1128/Mbio.02876-18 |
0.756 |
|
2018 |
Ortega DR, Zhulin IB. Phylogenetic and Protein Sequence Analysis of Bacterial Chemoreceptors. Methods in Molecular Biology (Clifton, N.J.). 1729: 373-385. PMID 29429105 DOI: 10.1007/978-1-4939-7577-8_29 |
0.329 |
|
2017 |
Ortega DR, Fleetwood AD, Krell T, Harwood CS, Jensen GJ, Zhulin IB. Assigning chemoreceptors to chemosensory pathways in Pseudomonas aeruginosa. Proceedings of the National Academy of Sciences of the United States of America. PMID 29133402 DOI: 10.1073/Pnas.1708842114 |
0.799 |
|
2017 |
Ortega Á, Zhulin IB, Krell T. Sensory Repertoire of Bacterial Chemoreceptors. Microbiology and Molecular Biology Reviews : Mmbr. 81. PMID 29070658 DOI: 10.1128/Mmbr.00033-17 |
0.35 |
|
2017 |
Armitage JP, Becker A, Christie PJ, de Boer PAJ, DiRita VJ, Gourse RL, Henkin TM, Margolin W, Metcalf WW, Mullineaux CW, O'Toole GA, Parkinson JS, Schneewind O, Silhavy TJ, Stock AM, ... Zhulin IB, et al. Classic Spotlights: Selected Highlights from the First 100 Years of the Journal of Bacteriology. Journal of Bacteriology. 199. PMID 28611240 DOI: 10.1128/Jb.00062-17 |
0.458 |
|
2017 |
Adebali O, Petukh MG, Reznik AO, Tishkov AV, Upadhyay AA, Zhulin IB. Class III histidine kinases: a recently accessorized kinase domain in putative modulators of type IV pili based motility. Journal of Bacteriology. PMID 28484044 DOI: 10.1128/Jb.00218-17 |
0.821 |
|
2016 |
Adebali O, Zhulin IB. Aquerium: A web application for comparative exploration of domain-based protein occurrences on the taxonomically clustered genome tree. Proteins. PMID 27802571 DOI: 10.1002/Prot.25199 |
0.738 |
|
2016 |
Day CJ, King RM, Shewell LK, Tram G, Najnin T, Hartley-Tassell LE, Wilson JC, Fleetwood AD, Zhulin IB, Korolik V. A direct-sensing galactose chemoreceptor recently evolved in invasive strains of Campylobacter jejuni. Nature Communications. 7: 13206. PMID 27762269 DOI: 10.1038/Ncomms13206 |
0.818 |
|
2016 |
Buensuceso RN, Nguyen Y, Zhang K, Daniel-Ivad M, Sugiman-Marangos SN, Fleetwood AD, Zhulin IB, Junop MS, Howell PL, Burrows LL. The conserved TPR-containing C-terminal domain of Pseudomonas aeruginosa FimV is required for its cAMP-dependent and independent functions. Journal of Bacteriology. PMID 27297880 DOI: 10.1128/Jb.00322-16 |
0.793 |
|
2016 |
Upadhyay AA, Fleetwood AD, Adebali O, Finn RD, Zhulin IB. Cache Domains That are Homologous to, but Different from PAS Domains Comprise the Largest Superfamily of Extracellular Sensors in Prokaryotes. Plos Computational Biology. 12: e1004862. PMID 27049771 DOI: 10.1371/Journal.Pcbi.1004862 |
0.797 |
|
2016 |
Adebali O, Reznik AO, Ory DS, Zhulin IB. Establishing the precise evolutionary history of a gene improves prediction of disease-causing missense mutations. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 26890452 DOI: 10.1038/Gim.2015.208 |
0.656 |
|
2016 |
Ortega DR, Zhulin IB. Evolutionary Genomics Suggests That CheV Is an Additional Adaptor for Accommodating Specific Chemoreceptors within the Chemotaxis Signaling Complex. Plos Computational Biology. 12: e1004723. PMID 26844549 DOI: 10.1371/Journal.Pcbi.1004723 |
0.386 |
|
2015 |
Adebali O, Ortega DR, Zhulin IB. CDvist: a webserver for identification and visualization of conserved domains in protein sequences. Bioinformatics (Oxford, England). 31: 1475-7. PMID 25527097 DOI: 10.1093/Bioinformatics/Btu836 |
0.715 |
|
2014 |
Ulrich LE, Zhulin IB. SeqDepot: streamlined database of biological sequences and precomputed features. Bioinformatics (Oxford, England). 30: 295-7. PMID 24234005 DOI: 10.1093/Bioinformatics/Btt658 |
0.748 |
|
2013 |
van Kessel JC, Ulrich LE, Zhulin IB, Bassler BL. Analysis of activator and repressor functions reveals the requirements for transcriptional control by LuxR, the master regulator of quorum sensing in Vibrio harveyi. Mbio. 4. PMID 23839217 DOI: 10.1128/Mbio.00378-13 |
0.764 |
|
2013 |
Borziak K, Fleetwood AD, Zhulin IB. Chemoreceptor gene loss and acquisition via horizontal gene transfer in Escherichia coli. Journal of Bacteriology. 195: 3596-602. PMID 23749975 DOI: 10.1128/Jb.00421-13 |
0.771 |
|
2013 |
Li X, Fleetwood AD, Bayas C, Bilwes AM, Ortega DR, Falke JJ, Zhulin IB, Crane BR. The 3.2 Å resolution structure of a receptor: CheA:CheW signaling complex defines overlapping binding sites and key residue interactions within bacterial chemosensory arrays. Biochemistry. 52: 3852-65. PMID 23668907 DOI: 10.1021/Bi400383E |
0.791 |
|
2012 |
Rekapalli B, Wuichet K, Peterson GD, Zhulin IB. Dynamics of domain coverage of the protein sequence universe. Bmc Genomics. 13: 634. PMID 23157439 DOI: 10.1186/1471-2164-13-634 |
0.74 |
|
2012 |
Sukharnikov LO, Alahuhta M, Brunecky R, Upadhyay A, Himmel ME, Lunin VV, Zhulin IB. Sequence, structure, and evolution of cellulases in glycoside hydrolase family 48 Journal of Biological Chemistry. 287: 41068-41077. PMID 23055526 DOI: 10.1074/Jbc.M112.405720 |
0.784 |
|
2011 |
Wisniewski-Dyé F, Borziak K, Khalsa-Moyers G, Alexandre G, Sukharnikov LO, Wuichet K, Hurst GB, McDonald WH, Robertson JS, Barbe V, Calteau A, Rouy Z, Mangenot S, Prigent-Combaret C, Normand P, ... ... Zhulin IB, et al. Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments. Plos Genetics. 7: e1002430. PMID 22216014 DOI: 10.1371/Journal.Pgen.1002430 |
0.779 |
|
2011 |
Sukharnikov LO, Cantwell BJ, Podar M, Zhulin IB. Cellulases: ambiguous nonhomologous enzymes in a genomic perspective. Trends in Biotechnology. 29: 473-9. PMID 21683463 DOI: 10.1016/J.Tibtech.2011.04.008 |
0.792 |
|
2010 |
Wuichet K, Zhulin IB. Origins and diversification of a complex signal transduction system in prokaryotes. Science Signaling. 3: ra50. PMID 20587806 DOI: 10.1126/Scisignal.2000724 |
0.754 |
|
2010 |
Xie Z, Ulrich LE, Zhulin IB, Alexandre G. PAS domain containing chemoreceptor couples dynamic changes in metabolism with chemotaxis. Proceedings of the National Academy of Sciences of the United States of America. 107: 2235-40. PMID 20133866 DOI: 10.1073/Pnas.0910055107 |
0.799 |
|
2010 |
Wuichet K, Cantwell BJ, Zhulin IB. Evolution and phyletic distribution of two-component signal transduction systems. Current Opinion in Microbiology. 13: 219-25. PMID 20133179 DOI: 10.1016/J.Mib.2009.12.011 |
0.784 |
|
2010 |
Ulrich LE, Zhulin IB. The MiST2 database: a comprehensive genomics resource on microbial signal transduction. Nucleic Acids Research. 38: D401-7. PMID 19900966 DOI: 10.1093/Nar/Gkp940 |
0.81 |
|
2009 |
Briegel A, Ortega DR, Tocheva EI, Wuichet K, Li Z, Chen S, Müller A, Iancu CV, Murphy GE, Dobro MJ, Zhulin IB, Jensen GJ. Universal architecture of bacterial chemoreceptor arrays. Proceedings of the National Academy of Sciences of the United States of America. 106: 17181-6. PMID 19805102 DOI: 10.1073/Pnas.0905181106 |
0.756 |
|
2009 |
Anderson IJ, Dharmarajan L, Rodriguez J, Hooper S, Porat I, Ulrich LE, Elkins JG, Mavromatis K, Sun H, Land M, Lapidus A, Lucas S, Barry K, Huber H, Zhulin IB, et al. The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota. Bmc Genomics. 10: 145. PMID 19341479 DOI: 10.1186/1471-2164-10-145 |
0.768 |
|
2009 |
Elliott KT, Zhulin IB, Stuckey JA, DiRita VJ. Conserved residues in the HAMP domain define a new family of proposed bipartite energy taxis receptors. Journal of Bacteriology. 191: 375-87. PMID 18952801 DOI: 10.1128/Jb.00578-08 |
0.333 |
|
2008 |
Anderson I, Rodriguez J, Susanti D, Porat I, Reich C, Ulrich LE, Elkins JG, Mavromatis K, Lykidis A, Kim E, Thompson LS, Nolan M, Land M, Copeland A, Lapidus A, ... ... Zhulin IB, et al. Genome sequence of Thermofilum pendens reveals an exceptional loss of biosynthetic pathways without genome reduction. Journal of Bacteriology. 190: 2957-65. PMID 18263724 DOI: 10.1128/Jb.01949-07 |
0.775 |
|
2007 |
Borziak K, Zhulin IB. FIST: a sensory domain for diverse signal transduction pathways in prokaryotes and ubiquitin signaling in eukaryotes. Bioinformatics (Oxford, England). 23: 2518-21. PMID 17855421 DOI: 10.1093/Bioinformatics/Btm384 |
0.759 |
|
2007 |
Wuichet K, Alexander RP, Zhulin IB. Comparative genomic and protein sequence analyses of a complex system controlling bacterial chemotaxis. Methods in Enzymology. 422: 1-31. PMID 17628132 DOI: 10.1016/S0076-6879(06)22001-9 |
0.822 |
|
2007 |
Alexander RP, Zhulin IB. Evolutionary genomics reveals conserved structural determinants of signaling and adaptation in microbial chemoreceptors. Proceedings of the National Academy of Sciences of the United States of America. 104: 2885-90. PMID 17299051 DOI: 10.1073/Pnas.0609359104 |
0.779 |
|
2007 |
Ulrich LE, Zhulin IB. MiST: a microbial signal transduction database. Nucleic Acids Research. 35: D386-90. PMID 17135192 DOI: 10.1093/Nar/Gkl932 |
0.809 |
|
2006 |
Chain PS, Denef VJ, Konstantinidis KT, Vergez LM, Agulló L, Reyes VL, Hauser L, Córdova M, Gómez L, González M, Land M, Lao V, Larimer F, LiPuma JJ, Mahenthiralingam E, ... ... Zhulin IB, et al. Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility. Proceedings of the National Academy of Sciences of the United States of America. 103: 15280-7. PMID 17030797 DOI: 10.1073/Pnas.0606924103 |
0.786 |
|
2006 |
Wu M, Ren Q, Durkin AS, Daugherty SC, Brinkac LM, Dodson RJ, Madupu R, Sullivan SA, Kolonay JF, Haft DH, Nelson WC, Tallon LJ, Jones KM, Ulrich LE, Gonzalez JM, ... Zhulin IB, et al. Correction: Life in Hot Carbon Monoxide: The Complete Genome Sequence of Carboxydothermus hydrogenoformans Z-2901 Plos Genetics. 2: e60. DOI: 10.1371/Journal.Pgen.0020060 |
0.745 |
|
2005 |
Wu M, Ren Q, Durkin AS, Daugherty SC, Brinkac LM, Dodson RJ, Madupu R, Sullivan SA, Kolonay JF, Haft DH, Nelson WC, Tallon LJ, Jones KM, Ulrich LE, Gonzalez JM, ... Zhulin IB, et al. Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901. Plos Genetics. 1: e65. PMID 16311624 DOI: 10.1371/Journal.Pgen.0010065 |
0.766 |
|
2005 |
Ulrich LE, Zhulin IB. Four-helix bundle: a ubiquitous sensory module in prokaryotic signal transduction. Bioinformatics (Oxford, England). 21: iii45-8. PMID 16306392 DOI: 10.1093/Bioinformatics/Bti1204 |
0.789 |
|
2005 |
Ulrich LE, Koonin EV, Zhulin IB. One-component systems dominate signal transduction in prokaryotes. Trends in Microbiology. 13: 52-6. PMID 15680762 DOI: 10.1016/J.Tim.2004.12.006 |
0.779 |
|
2004 |
Alexandre G, Greer-Phillips S, Zhulin IB. Ecological role of energy taxis in microorganisms. Fems Microbiology Reviews. 28: 113-26. PMID 14975533 DOI: 10.1016/J.Femsre.2003.10.003 |
0.757 |
|
2003 |
Greer-Phillips SE, Alexandre G, Taylor BL, Zhulin IB. Aer and Tsr guide Escherichia coli in spatial gradients of oxidizable substrates. Microbiology (Reading, England). 149: 2661-7. PMID 12949190 DOI: 10.1099/Mic.0.26304-0 |
0.763 |
|
2003 |
Wuichet K, Zhulin IB. Molecular evolution of sensory domains in cyanobacterial chemoreceptors. Trends in Microbiology. 11: 200-3. PMID 12781518 DOI: 10.1016/S0966-842X(03)00073-8 |
0.776 |
|
2003 |
Shu CJ, Ulrich LE, Zhulin IB. The NIT domain: a predicted nitrate-responsive module in bacterial sensory receptors. Trends in Biochemical Sciences. 28: 121-4. PMID 12633990 DOI: 10.1016/S0968-0004(03)00032-X |
0.787 |
|
2003 |
Alexandre G, Zhulin IB. Different evolutionary constraints on chemotaxis proteins CheW and CheY revealed by heterologous expression studies and protein sequence analysis. Journal of Bacteriology. 185: 544-52. PMID 12511501 DOI: 10.1128/Jb.185.2.544-552.2003 |
0.608 |
|
2003 |
Zhulin IB, Nikolskaya AN, Galperin MY. Common extracellular sensory domains in transmembrane receptors for diverse signal transduction pathways in bacteria and archaea. Journal of Bacteriology. 185: 285-94. PMID 12486065 DOI: 10.1128/Jb.185.1.285-294.2003 |
0.319 |
|
2002 |
Sun X, Zhulin I, Wartell RM. Predicted structure and phyletic distribution of the RNA-binding protein Hfq. Nucleic Acids Research. 30: 3662-71. PMID 12202750 DOI: 10.1093/Nar/Gkf508 |
0.397 |
|
2002 |
Hauwaerts D, Alexandre G, Das SK, Vanderleyden J, Zhulin IB. A major chemotaxis gene cluster in Azospirillum brasilense and relationships between chemotaxis operons in α-proteobacteria Fems Microbiology Letters. 208: 61-67. PMID 11934495 DOI: 10.1111/J.1574-6968.2002.Tb11061.X |
0.697 |
|
2001 |
Kirby JR, Kristich CJ, Saulmon MM, Zimmer MA, Garrity LF, Zhulin IB, Ordal GW. CheC is related to the family of flagellar switch proteins and acts independently from CheD to control chemotaxis in Bacillus subtilis. Molecular Microbiology. 42: 573-85. PMID 11722727 DOI: 10.1046/J.1365-2958.2001.02581.X |
0.31 |
|
2001 |
Mougel C, Zhulin IB. CHASE: An extracellular sensing domain common to transmembrane receptors from prokaryotes, lower eukaryotes and plants Trends in Biochemical Sciences. 26: 582-584. PMID 11590001 DOI: 10.1016/S0968-0004(01)01969-7 |
0.664 |
|
2001 |
Alexandre G, Zhulin IB. More than one way to sense chemicals Journal of Bacteriology. 183: 4681-4686. PMID 11466269 DOI: 10.1128/Jb.183.16.4681-4686.2001 |
0.476 |
|
2001 |
Zhulin IB. The superfamily of chemotaxis transducers: From physiology to genomics and back Advances in Microbial Physiology. 45: 157-198. PMID 11450109 DOI: 10.1016/S0065-2911(01)45004-1 |
0.328 |
|
2000 |
Alexandre G, Greer SE, Zhulin IB. Energy taxis is the dominant behavior in Azospirillum brasilense. Journal of Bacteriology. 182: 6042-8. PMID 11029423 DOI: 10.1128/Jb.182.21.6042-6048.2000 |
0.491 |
|
2000 |
Repik A, Rebbapragada A, Johnson MS, Haznedar JO, Zhulin IB, Taylor BL. PAS domain residues involved in signal transduction by the Aer redox sensor of Escherichia coli. Molecular Microbiology. 36: 806-16. PMID 10844669 DOI: 10.1046/J.1365-2958.2000.01910.X |
0.766 |
|
2000 |
Alexandre G, Zhulin IB. Laccases are widespread in bacteria [1] Trends in Biotechnology. 18: 41-42. PMID 10652504 DOI: 10.1016/S0167-7799(99)01406-7 |
0.499 |
|
1999 |
Taylor BL, Zhulin IB, Johnson MS. Aerotaxis and other energy-sensing behavior in bacteria. Annual Review of Microbiology. 53: 103-28. PMID 10547687 DOI: 10.1146/Annurev.Micro.53.1.103 |
0.546 |
|
1999 |
Alexandre G, Bally R, Taylor BL, Zhulin IB. Loss of cytochrome c oxidase activity and acquisition of resistance to quinone analogs in a laccase-positive variant of Azospirillum lipoferum. Journal of Bacteriology. 181: 6730-8. PMID 10542175 DOI: 10.1128/Jb.181.21.6730-6738.1999 |
0.626 |
|
1999 |
Taylor BL, Zhulin IB. PAS domains: internal sensors of oxygen, redox potential, and light. Microbiology and Molecular Biology Reviews : Mmbr. 63: 479-506. PMID 10357859 DOI: 10.1128/Mmbr.63.2.479-506.1999 |
0.572 |
|
1998 |
Zhulin IB, Taylor BL. Correlation of PAS domains with electron transport-associated proteins in completely sequenced microbial genomes. Molecular Microbiology. 29: 1522-3. PMID 9781888 |
0.557 |
|
1998 |
Taylor BL, Zhulin IB. In search of higher energy: metabolism-dependent behaviour in bacteria. Molecular Microbiology. 28: 683-90. PMID 9643537 DOI: 10.1046/J.1365-2958.1998.00835.X |
0.554 |
|
1997 |
Rebbapragada A, Johnson MS, Harding GP, Zuccarelli AJ, Fletcher HM, Zhulin IB, Taylor BL. The Aer protein and the serine chemoreceptor Tsr independently sense intracellular energy levels and transduce oxygen, redox, and energy signals for Escherichia coli behavior. Proceedings of the National Academy of Sciences of the United States of America. 94: 10541-6. PMID 9380671 DOI: 10.1073/Pnas.94.20.10541 |
0.778 |
|
1997 |
Zhulin IB, Johnson MS, Taylor BL. How do bacteria avoid high oxygen concentrations? Bioscience Reports. 17: 335-42. PMID 9337487 DOI: 10.1023/A:1027340813657 |
0.485 |
|
1997 |
Zhulin IB, Taylor BL, Dixon R. PAS domain S-boxes in Archaea, Bacteria and sensors for oxygen and redox. Trends in Biochemical Sciences. 22: 331-3. PMID 9301332 DOI: 10.1016/S0968-0004(97)01110-9 |
0.498 |
|
1997 |
Johnson MS, Zhulin IB, Gapuzan ME, Taylor BL. Oxygen-dependent growth of the obligate anaerobe Desulfovibrio vulgaris Hildenborough. Journal of Bacteriology. 179: 5598-601. PMID 9287020 DOI: 10.1128/Jb.179.17.5598-5601.1997 |
0.428 |
|
1997 |
Zhulin IB, Rowsell EH, Johnson MS, Taylor BL. Glycerol elicits energy taxis of Escherichia coli and Salmonella typhimurium. Journal of Bacteriology. 179: 3196-201. PMID 9150214 DOI: 10.1128/Jb.179.10.3196-3201.1997 |
0.49 |
|
1997 |
Rebbapragada A, Johnson MS, Zhulin IB, Taylor BI. Novel oxygen (redox) sensor involved in bacterial signal transductïon Faseb Journal. 11. |
0.729 |
|
1996 |
Bespalov VA, Zhulin IB, Taylor BL. Behavioral responses of Escherichia coli to changes in redox potential. Proceedings of the National Academy of Sciences of the United States of America. 93: 10084-9. PMID 8816755 DOI: 10.1073/Pnas.93.19.10084 |
0.512 |
|
1996 |
Zhulin IB, Bespalov VA, Johnson MS, Taylor BL. Oxygen taxis and proton motive force in Azospirillum brasilense. Journal of Bacteriology. 178: 5199-204. PMID 8752338 DOI: 10.1128/Jb.178.17.5199-5204.1996 |
0.444 |
|
1995 |
Zhulin IB, Lois AF, Taylor BL. Behavior of Rhizobium meliloti in oxygen gradients Febs Letters. 367: 180-182. PMID 7796916 DOI: 10.1016/0014-5793(95)00561-M |
0.465 |
|
1995 |
Wong LS, Johnson MS, Zhulin IB, Taylor BL. Role of methylation in aerotaxis in Bacillus subtilis Journal of Bacteriology. 177: 3985-3991. PMID 7608071 DOI: 10.1128/Jb.177.14.3985-3991.1995 |
0.448 |
|
1993 |
Zhulin IB, Armitage JP. Motility, chemokinesis, and methylation-independent chemotaxis in Azospirillum brasilense Journal of Bacteriology. 175: 952-958. PMID 8432718 DOI: 10.1128/Jb.175.4.952-958.1993 |
0.521 |
|
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