Brian C. Schutte - Related publications

Biochemistry and Molecular Biology - Doctor of Philosophy Michigan State University, East Lansing, MI 
Human Development, Medicine and Surgery, Biochemistry
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50 most relevant papers in past 60 days:
Year Citation  Score
2019 Huang L, Peng F, Wei Y, He W, Zhao S, Wang J, Zhang Y, Zhao H, Deng W. A novel method to investigate the effects of gene mutations at the cellular level using a dual expression lentiviral vector. Bioscience Reports. PMID 30971498 DOI: 10.1042/BSR20182383   
2019 Molina MD, Gache C, Lepage T. Expression of exogenous mRNAs to study gene function in echinoderm embryos. Methods in Cell Biology. 151: 239-282. PMID 30948011 DOI: 10.1016/bs.mcb.2018.10.011   
2019 Shah K, Cao W, Ellison CE. Adenine Methylation in Is Associated with the Tissue-Specific Expression of Developmental and Regulatory Genes. G3 (Bethesda, Md.). PMID 30988038 DOI: 10.1534/g3.119.400023   
2019 Gomez-Gonzalez PJ, Andreu N, Phelan JE, de Sessions PF, Glynn JR, Crampin AC, Campino S, Butcher PD, Hibberd ML, Clark TG. An integrated whole genome analysis of Mycobacterium tuberculosis reveals insights into relationship between its genome, transcriptome and methylome. Scientific Reports. 9: 5204. PMID 30914757 DOI: 10.1038/s41598-019-41692-2   
2019 Xu S, Zhang H, Liu T, Chen Y, He D, Li L. G Protein γ subunit 7 loss contributes to progression of clear cell renal cell carcinoma. Journal of Cellular Physiology. PMID 30945310 DOI: 10.1002/jcp.28597   
2019 Wang L, Wang H, Duan X, Dai P, Li J. Comprehensive Analysis of the Canonical and Non-canonical Wnt Signaling Pathways in Gastric Cancer. Digestive Diseases and Sciences. PMID 30997579 DOI: 10.1007/s10620-019-05606-6   
2019 Feng H, Gu ZY, Li Q, Liu QH, Yang XY, Zhang JJ. Identification of significant genes with poor prognosis in ovarian cancer via bioinformatical analysis. Journal of Ovarian Research. 12: 35. PMID 31010415 DOI: 10.1186/s13048-019-0508-2   
2019 Zhang W, Gao Y, Long M, Shen B. Origination and evolution of orphan genes and de novo genes in the genome of Caenorhabditis elegans. Science China. Life Sciences. PMID 30919281 DOI: 10.1007/s11427-019-9482-0   
2019 Al-Hashimi H, Chiarelli T, Lundquist EA, Buechner M. Novel Genes Involved in Formation of the Tubular Excretory Canals of . G3 (Bethesda, Md.). PMID 30885922 DOI: 10.1534/g3.119.200626   
2019 Lazcano I, Rodríguez-Ortiz R, Villalobos P, Martínez-Torres A, Solís-Saínz JC, Orozco A. Knock-Down of Specific Thyroid Hormone Receptor Isoforms Impairs Body Plan Development in Zebrafish. Frontiers in Endocrinology. 10: 156. PMID 30930855 DOI: 10.3389/fendo.2019.00156   
2019 Finkle JD, Bagheri N. Hybrid analysis of gene dynamics predicts context specific expression and offers regulatory insights. Bioinformatics (Oxford, England). PMID 30994899 DOI: 10.1093/bioinformatics/btz256   
2019 Ehrhart F, Coort SL, Eijssen L, Cirillo E, Smeets EE, Bahram Sangani N, Evelo CT, Curfs LMG. Integrated analysis of human transcriptome data for Rett syndrome finds a network of involved genes. The World Journal of Biological Psychiatry : the Official Journal of the World Federation of Societies of Biological Psychiatry. 1-23. PMID 30907210 DOI: 10.1080/15622975.2019.1593501   
2019 Alafiatayo AA, Lai KS, Ahmad S, Mahmood M, Shaharuddin NA. RNA-Seq analysis revealed genes associated with UV-induced cell necrosis through MAPK/TNF-α pathways in human dermal fibroblast cells as an inducer of premature photoaging. Genomics. PMID 30946891 DOI: 10.1016/j.ygeno.2019.03.011   
2019 Ziats CA, Grosvenor LP, Sarasua SM, Thurm AE, Swedo SE, Mahfouz A, Rennert OM, Ziats MN. Functional genomics analysis of Phelan-McDermid syndrome 22q13 region during human neurodevelopment. Plos One. 14: e0213921. PMID 30875393 DOI: 10.1371/journal.pone.0213921   
2019 Wang H, Zong Q, Wang S, Zhao C, Wu S, Bao W. Genome-wide DNA methylome and transcriptome analysis of porcine intestinal epithelial cells upon deoxynivalenol exposure. Journal of Agricultural and Food Chemistry. PMID 31013075 DOI: 10.1021/acs.jafc.9b00613   
2019 Laarman MD, Geeven G, Barnett P, , Rinkel GJE, de Laat W, Ruigrok YM, Bakkers J. Chromatin Conformation Links Putative Enhancers in Intracranial Aneurysm-Associated Regions to Potential Candidate Genes. Journal of the American Heart Association. 8: e011201. PMID 30994044 DOI: 10.1161/JAHA.118.011201   
2019 Sarkar AK, Tung PY, Blischak JD, Burnett JE, Li YI, Stephens M, Gilad Y. Discovery and characterization of variance QTLs in human induced pluripotent stem cells. Plos Genetics. 15: e1008045. PMID 31002671 DOI: 10.1371/journal.pgen.1008045   
2019 Du X, Wei C, Hejazi Pastor DP, Rao ER, Li Y, Grasselli G, Godfrey J, Palmenberg AC, Andrade J, Hansel C, Gomez CM. α1ACT Is Essential for Survival and Early Cerebellar Programming in a Critical Neonatal Window. Neuron. PMID 30922876 DOI: 10.1016/j.neuron.2019.02.036   
2019 Dawes R, Lek M, Cooper ST. Gene discovery informatics toolkit defines candidate genes for unexplained infertility and prenatal or infantile mortality. Npj Genomic Medicine. 4: 8. PMID 30993004 DOI: 10.1038/s41525-019-0081-z   
2019 Mack KL, Phifer-Rixey M, Harr B, Nachman MW. Gene Expression Networks Across Multiple Tissues Are Associated with Rates of Molecular Evolution in Wild House Mice. Genes. 10. PMID 30889893 DOI: 10.3390/genes10030225   
2019 Balogh E, Halász J, Soltész A, Erös-Honti Z, Gutermuth Á, Szalay L, Höhn M, Vágújfalvi A, Galiba G, Hegedüs A. Identification, Structural and Functional Characterization of Dormancy Regulator Genes in Apricot ( L.). Frontiers in Plant Science. 10: 402. PMID 31024581 DOI: 10.3389/fpls.2019.00402   
2019 McCorkindale AL, Wahle P, Werner S, Jungreis I, Menzel P, Shukla CJ, Abreu RLP, Irizarry RA, Meyer IM, Kellis M, Zinzen RP. A gene expression atlas of embryonic neurogenesis in reveals complex spatiotemporal regulation of lncRNAs. Development (Cambridge, England). 146. PMID 30923056 DOI: 10.1242/dev.175265   
2019 Li Q, Shen Y, Guo L, Wang H, Zhang Y, Fan C, Zheng Y. The transcription factor family in soybean: Genome-wide identification, expression profiling and genetic diversity analysis. Febs Open Bio. 9: 629-642. PMID 30984538 DOI: 10.1002/2211-5463.12596   
2019 Liu S, Lu M, Li H, Zuo Y. Prediction of Gene Expression Patterns With Generalized Linear Regression Model. Frontiers in Genetics. 10: 120. PMID 30886626 DOI: 10.3389/fgene.2019.00120   
2019 Liu X, Wu X, Sun C, Rong J. Identification and Expression Profiling of the Gene Family in L. under Abiotic Stress and Hormone Treatments. International Journal of Molecular Sciences. 20. PMID 30965557 DOI: 10.3390/ijms20071727   
2019 Armenta TC, Cole SW, Geschwind DH, Blumstein DT, Wayne RK. Gene expression shifts in yellow-bellied marmots prior to natal dispersal. Behavioral Ecology : Official Journal of the International Society For Behavioral Ecology. 30: 267-277. PMID 30971856 DOI: 10.1093/beheco/ary175   
2019 Edling CE, Fazmin IT, Chadda KR, Ahmad S, Valli H, Grace AA, Huang CL, Jeevaratnam K. Ageing in mice modelling mitochondrial dysfunction induces differential expression of a range of genes regulating ventricular electrophysiology. Bioscience Reports. PMID 30914453 DOI: 10.1042/BSR20190127   
2019 Gu H, Qi X, Jia Y, Zhang Z, Nie C, Li X, Li J, Jiang Z, Wang Q, Qu L. Inheritance patterns of the transcriptome in hybrid chickens and their parents revealed by expression analysis. Scientific Reports. 9: 5750. PMID 30962479 DOI: 10.1038/s41598-019-42019-x   
2019 Zhang W, Zhang S, Xu Y, Ma Y, Zhang D, Li X, Zhao S. The DNA Methylation Status of Wnt and Tgfβ Signals Is a Key Factor on Functional Regulation of Skeletal Muscle Satellite Cell Development. Frontiers in Genetics. 10: 220. PMID 30949196 DOI: 10.3389/fgene.2019.00220   
2019 Wheeler HE, Ploch S, Barbeira AN, Bonazzola R, Andaleon A, Fotuhi Sishpirani A, Saha A, Battle A, Roy S, Im HK. Imputed gene associations identify replicable trans-acting genes enriched in transcription pathways and complex traits. Genetic Epidemiology. PMID 30950127 DOI: 10.1002/gepi.22205   
2019 Das S, Bansal M. Variation of gene expression in plants is influenced by gene architecture and structural properties of promoters. Plos One. 14: e0212678. PMID 30908494 DOI: 10.1371/journal.pone.0212678   
2019 Yan S, Wang Q, Huo Z, Yang T, Yin X, Wang Z, Zhang Z, Wu H. Gene expression profiles between cystic and solid vestibular schwannoma indicate susceptible molecules and pathways in the cystic formation of vestibular schwannoma. Functional & Integrative Genomics. PMID 30953268 DOI: 10.1007/s10142-019-00672-5   
2019 Roos-Weil D, Decaudin C, Armand M, Della-Valle V, Diop MK, Ghamlouch H, Ropars V, Herate C, Lara D, Durot E, Haddad R, Mylonas E, Damm F, Pflumio F, Stoilova B, et al. A recurrent activating missense mutation in Waldenström macroglobulinemia affects the DNA binding of the ETS transcription factor SPI1 and enhances proliferation. Cancer Discovery. PMID 31018969 DOI: 10.1158/2159-8290.CD-18-0873   
2019 McNeill RV, Mason AS, Hodson ME, Catto JWF, Southgate J. Specificity of the Metallothionein-1 Response by Cadmium-Exposed Normal Human Urothelial Cells. International Journal of Molecular Sciences. 20. PMID 30884885 DOI: 10.3390/ijms20061344   
2019 Mancuso N, Freund MK, Johnson R, Shi H, Kichaev G, Gusev A, Pasaniuc B. Probabilistic fine-mapping of transcriptome-wide association studies. Nature Genetics. 51: 675-682. PMID 30926970 DOI: 10.1038/s41588-019-0367-1   
2019 Ravindran SP, Herrmann M, Cordellier M. Contrasting patterns of divergence at the regulatory and sequence level in European natural populations. Ecology and Evolution. 9: 2487-2504. PMID 30891195 DOI: 10.1002/ece3.4894   
2019 Lim WJ, Kim KH, Kim JY, Jeong S, Kim N. Identification of DNA-Methylated CpG Islands Associated With Gene Silencing in the Adult Body Tissues of the Ogye Chicken Using RNA-Seq and Reduced Representation Bisulfite Sequencing. Frontiers in Genetics. 10: 346. PMID 31040866 DOI: 10.3389/fgene.2019.00346   
2019 Wang Y, Jin S, Fu H, Qiao H, Sun S, Zhang W, Jiang S, Gong Y, Xiong Y, Wu Y. Identification and Characterization of the Gene in the Oriental River Prawn . International Journal of Molecular Sciences. 20. PMID 30965605 DOI: 10.3390/ijms20071734   
2019 Rossmassler K, Snow CD, Taggart D, Brown C, De Long SK. Advancing biomarkers for anaerobic o-xylene biodegradation via metagenomic analysis of a methanogenic consortium. Applied Microbiology and Biotechnology. PMID 30968165 DOI: 10.1007/s00253-019-09762-7   
2019 Brown A, Winter J, Gapinske M, Tague N, Woods WS, Perez-Pinera P. Multiplexed and tunable transcriptional activation by promoter insertion using nuclease-assisted vector integration. Nucleic Acids Research. PMID 30931472 DOI: 10.1093/nar/gkz210   
2019 Shaikh S, Shettigar SKG, Kumar S, Kantharia S, Kurva J, Cherian S. Novel mutation in gene in a family diagnosed with 3M syndrome. Journal of Genetics. 98. PMID 30945686   
2019 Xiang M, Zhang W, Wen H, Mo L, Zhao Y, Zhan Y. Comparative transcriptome analysis of human conjunctiva between normal and conjunctivochalasis persons by RNA sequencing. Experimental Eye Research. PMID 30999002 DOI: 10.1016/j.exer.2019.04.005   
2019 Hu X, Hao C, Cheng ZM, Zhong Y. Genome-Wide Identification, Characterization, and Expression Analysis of the Grapevine Superoxide Dismutase (SOD) Family. International Journal of Genomics. 2019: 7350414. PMID 30923713 DOI: 10.1155/2019/7350414   
2019 Cai H, Deng J, Li J, Ma M, Huang C, Zhao P, Ming F, Liang Q, Jia J, Zhang S, Zeng M, Zhang L. Modulating the 3' end-DNA and the fermentation process for enhanced production and biological activity of porcine interferon-gamma. Plos One. 14: e0214319. PMID 30913245 DOI: 10.1371/journal.pone.0214319   
2019 Xiong Y, Mi BB, Liu MF, Xue H, Wu QP, Liu GH. Bioinformatics Analysis and Identification of Genes and Molecular Pathways Involved in Synovial Inflammation in Rheumatoid Arthritis. Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 25: 2246-2256. PMID 30916045 DOI: 10.12659/MSM.915451   
2019 Cera A, Holganza MK, Hardan AA, Gamarra I, Eldabagh RS, Deschaine M, Elkamhawy S, Sisso EM, Foley JJ, Arnone JT. Functionally Related Genes Cluster into Genomic Regions That Coordinate Transcription at a Distance in Saccharomyces cerevisiae. Msphere. 4. PMID 30867326 DOI: 10.1128/mSphere.00063-19   
2019 Damasceno JD, Tosi LRO, Santos RERS, Mottram JC. DiCre-Based Inducible Gene Expression. Methods in Molecular Biology (Clifton, N.J.). 1971: 225-235. PMID 30980306 DOI: 10.1007/978-1-4939-9210-2_11   
2019 Todd CD, Deniz Ö, Taylor D, Branco MR. Functional evaluation of transposable elements as enhancers in mouse embryonic and trophoblast stem cells. Elife. 8. PMID 31012843 DOI: 10.7554/eLife.44344   
2019 Jo SS, Choi SS. Enrichment of rare alleles within epigenetic chromatin marks in the first intron. Genomics & Informatics. 17: e9. PMID 30929410 DOI: 10.5808/GI.2019.17.1.e9   
2019 Yan H, Wang Y, Hu B, Qiu Z, Zeng B, Fan C. Genome-Wide Characterization, Evolution, and Expression Profiling of Gene Family in Response to Phytohormone Treatments and Abiotic Stress in . International Journal of Molecular Sciences. 20. PMID 30974801 DOI: 10.3390/ijms20071765