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Da-Neng Wang - Publications

Affiliations: 
Basic Medical Science New York University, New York, NY, United States 
Area:
Molecular Biology, Microbiology Biology
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38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Sauer DB, Marden JJ, Sudar JC, Song J, Mulligan C, Wang DN. Structural basis of ion - substrate coupling in the Na-dependent dicarboxylate transporter VcINDY. Nature Communications. 13: 2644. PMID 35551191 DOI: 10.1038/s41467-022-30406-4  0.654
2022 Brawley DN, Sauer DB, Li J, Zheng X, Koide A, Jedhe GS, Suwatthee T, Song J, Liu Z, Arora PS, Koide S, Torres VJ, Wang DN, Traaseth NJ. Structural basis for inhibition of the drug efflux pump NorA from Staphylococcus aureus. Nature Chemical Biology. PMID 35361990 DOI: 10.1038/s41589-022-00994-9  0.632
2021 Sauer DB, Wang B, Sudar JC, Song J, Marden J, Rice WJ, Wang DN. The ups and downs of elevator-type di-/tricarboxylate membrane transporters. The Febs Journal. PMID 34403567 DOI: 10.1111/febs.16158  0.715
2021 Sauer DB, Song J, Wang B, Hilton JK, Karpowich NK, Mindell JA, Rice WJ, Wang DN. Structure and inhibition mechanism of the human citrate transporter NaCT. Nature. PMID 33597751 DOI: 10.1038/s41586-021-03230-x  0.676
2020 Sauer DB, Trebesch N, Marden JJ, Cocco N, Song J, Koide A, Koide S, Tajkhorshid E, Wang DN. Structural basis for the reaction cycle of DASS dicarboxylate transporters. Elife. 9. PMID 32869741 DOI: 10.7554/Elife.61350  0.699
2019 Sauer DB, Wang DN. Predicting the Optimal Growth Temperatures of Prokaryotes using only Genome Derived Features. Bioinformatics (Oxford, England). PMID 30689741 DOI: 10.1093/Bioinformatics/Btz059  0.586
2015 Sauer DB, Karpowich NK, Song JM, Wang DN. Rapid Bioinformatic Identification of Thermostabilizing Mutations. Biophysical Journal. 109: 1420-8. PMID 26445442 DOI: 10.1016/J.Bpj.2015.07.026  0.669
2015 Sauer DB, Karpowich NK, Wang D. Bioinformatic Methods for the Rapid Identification of Thermostabilizing Mutants Biophysical Journal. 108: 92a. DOI: 10.1016/J.Bpj.2014.11.537  0.695
2014 Mulligan C, Fitzgerald GA, Wang DN, Mindell JA. Functional characterization of a Na+-dependent dicarboxylate transporter from Vibrio cholerae. The Journal of General Physiology. 143: 745-59. PMID 24821967 DOI: 10.1085/jgp.201311141  0.345
2013 Waight AB, Czyzewski BK, Wang DN. Ion selectivity and gating mechanisms of FNT channels. Current Opinion in Structural Biology. 23: 499-506. PMID 23773802 DOI: 10.1016/J.Sbi.2013.05.007  0.747
2013 Karpowich NK, Wang DN. Assembly and mechanism of a group II ECF transporter. Proceedings of the National Academy of Sciences of the United States of America. 110: 2534-9. PMID 23359690 DOI: 10.1073/Pnas.1217361110  0.398
2012 Mancusso R, Gregorio GG, Liu Q, Wang DN. Structure and mechanism of a bacterial sodium-dependent dicarboxylate transporter. Nature. 491: 622-6. PMID 23086149 DOI: 10.1038/Nature11542  0.732
2012 Czyzewski BK, Wang DN. Identification and characterization of a bacterial hydrosulphide ion channel. Nature. 483: 494-7. PMID 22407320 DOI: 10.1038/Nature10881  0.743
2012 Wang D, Czyzewski BK. Identification and Structure Determination of a Bacterial Hydrosulfide Ion Channel Biophysical Journal. 102: 8a. DOI: 10.1016/J.Bpj.2011.11.067  0.75
2011 Mancusso R, Karpowich NK, Czyzewski BK, Wang DN. Simple screening method for improving membrane protein thermostability. Methods (San Diego, Calif.). 55: 324-9. PMID 21840396 DOI: 10.1016/J.Ymeth.2011.07.008  0.635
2010 Nyola A, Karpowich NK, Zhen J, Marden J, Reith ME, Wang DN. Substrate and drug binding sites in LeuT. Current Opinion in Structural Biology. 20: 415-22. PMID 20739005 DOI: 10.1016/J.Sbi.2010.05.007  0.372
2010 Love J, Mancia F, Shapiro L, Punta M, Rost B, Girvin M, Wang DN, Zhou M, Hunt JF, Szyperski T, Gouaux E, MacKinnon R, McDermott A, Honig B, Inouye M, et al. The New York Consortium on Membrane Protein Structure (NYCOMPS): a high-throughput platform for structural genomics of integral membrane proteins. Journal of Structural and Functional Genomics. 11: 191-9. PMID 20690043 DOI: 10.1007/S10969-010-9094-7  0.351
2010 Karpowich NK, Wang DN. Biophysics: Transporter in the spotlight. Nature. 465: 171-2. PMID 20463728 DOI: 10.1038/465171A  0.413
2010 Waight AB, Love J, Wang DN. Structure and mechanism of a pentameric formate channel. Nature Structural & Molecular Biology. 17: 31-7. PMID 20010838 DOI: 10.1038/nsmb.1740  0.427
2009 Law CJ, Enkavi G, Wang DN, Tajkhorshid E. Structural basis of substrate selectivity in the glycerol-3-phosphate: phosphate antiporter GlpT. Biophysical Journal. 97: 1346-53. PMID 19720022 DOI: 10.1016/J.Bpj.2009.06.026  0.329
2009 Zhou Z, Zhen J, Karpowich NK, Law CJ, Reith ME, Wang DN. Antidepressant specificity of serotonin transporter suggested by three LeuT-SSRI structures. Nature Structural & Molecular Biology. 16: 652-7. PMID 19430461 DOI: 10.1038/Nsmb.1602  0.418
2008 Karpowich NK, Wang DN. Structural biology. Symmetric transporters for asymmetric transport. Science (New York, N.Y.). 321: 781-2. PMID 18687947 DOI: 10.1126/Science.1161495  0.441
2008 Law CJ, Maloney PC, Wang DN. Ins and outs of major facilitator superfamily antiporters. Annual Review of Microbiology. 62: 289-305. PMID 18537473 DOI: 10.1146/annurev.micro.61.080706.093329  0.375
2008 Law CJ, Almqvist J, Bernstein A, Goetz RM, Huang Y, Soudant C, Laaksonen A, Hovmöller S, Wang DN. Salt-bridge dynamics control substrate-induced conformational change in the membrane transporter GlpT. Journal of Molecular Biology. 378: 828-39. PMID 18395745 DOI: 10.1016/J.Jmb.2008.03.029  0.433
2007 Law CJ, Yang Q, Soudant C, Maloney PC, Wang DN. Kinetic evidence is consistent with the rocker-switch mechanism of membrane transport by GlpT. Biochemistry. 46: 12190-7. PMID 17915951 DOI: 10.1021/bi701383g  0.325
2007 Zhou Z, Zhen J, Karpowich NK, Goetz RM, Law CJ, Reith ME, Wang DN. LeuT-desipramine structure reveals how antidepressants block neurotransmitter reuptake. Science (New York, N.Y.). 317: 1390-3. PMID 17690258 DOI: 10.1126/Science.1147614  0.403
2007 Almqvist J, Huang Y, Laaksonen A, Wang DN, Hovmöller S. Docking and homology modeling explain inhibition of the human vesicular glutamate transporters. Protein Science : a Publication of the Protein Society. 16: 1819-29. PMID 17660252 DOI: 10.1110/Ps.072944707  0.443
2004 Lemieux MJ, Huang Y, Wang DN. Glycerol-3-phosphate transporter of Escherichia coli: structure, function and regulation. Research in Microbiology. 155: 623-9. PMID 15380549 DOI: 10.1016/J.Resmic.2004.05.016  0.458
2004 Lemieux MJ, Huang Y, Wang DN. The structural basis of substrate translocation by the Escherichia coli glycerol-3-phosphate transporter: a member of the major facilitator superfamily. Current Opinion in Structural Biology. 14: 405-12. PMID 15313233 DOI: 10.1016/J.Sbi.2004.06.003  0.444
2004 Jiang QX, Wang DN, MacKinnon R. Electron microscopic analysis of KvAP voltage-dependent K+ channels in an open conformation. Nature. 430: 806-10. PMID 15306816 DOI: 10.1038/Nature02735  0.361
2003 Chen Y, Song J, Sui SF, Wang DN. DnaK and DnaJ facilitated the folding process and reduced inclusion body formation of magnesium transporter CorA overexpressed in Escherichia coli. Protein Expression and Purification. 32: 221-31. PMID 14965767 DOI: 10.1016/S1046-5928(03)00233-X  0.406
2003 Safferling M, Griffith H, Jin J, Sharp J, De Jesus M, Ng C, Krulwich TA, Wang DN. TetL tetracycline efflux protein from Bacillus subtilis is a dimer in the membrane and in detergent solution. Biochemistry. 42: 13969-76. PMID 14636065 DOI: 10.1021/Bi035173Q  0.313
2003 Lemieux MJ, Song J, Kim MJ, Huang Y, Villa A, Auer M, Li XD, Wang DN. Three-dimensional crystallization of the Escherichia coli glycerol-3-phosphate transporter: a member of the major facilitator superfamily. Protein Science : a Publication of the Protein Society. 12: 2748-56. PMID 14627735 DOI: 10.1110/Ps.03276603  0.389
2003 Huang Y, Lemieux MJ, Song J, Auer M, Wang DN. Structure and mechanism of the glycerol-3-phosphate transporter from Escherichia coli. Science (New York, N.Y.). 301: 616-20. PMID 12893936 DOI: 10.1126/Science.1087619  0.461
2003 Wang DN, Lemieux MJ, Boulter JM. Purification and characterization of transporter proteins from human erythrocyte membrane. Methods in Molecular Biology (Clifton, N.J.). 228: 239-55. PMID 12824558 DOI: 10.1385/1-59259-400-X:239  0.452
2003 Wang DN, Safferling M, Lemieux MJ, Griffith H, Chen Y, Li XD. Practical aspects of overexpressing bacterial secondary membrane transporters for structural studies. Biochimica Et Biophysica Acta. 1610: 23-36. PMID 12586376 DOI: 10.1016/S0005-2736(02)00709-5  0.511
2002 Lemieux MJ, Reithmeier RA, Wang DN. Importance of detergent and phospholipid in the crystallization of the human erythrocyte anion-exchanger membrane domain. Journal of Structural Biology. 137: 322-32. PMID 12096900 DOI: 10.1016/S1047-8477(02)00010-2  0.41
2001 Li XD, Villa A, Gownley C, Kim MJ, Song J, Auer M, Wang DN. Monomeric state and ligand binding of recombinant GABA transporter from Escherichia coli. Febs Letters. 494: 165-9. PMID 11311234 DOI: 10.1016/S0014-5793(01)02334-1  0.363
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