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Parminder Kaur, Ph.D. - Publications

Affiliations: 
2012 Physics Arizona State University, Tempe, AZ, United States 
Area:
General Biophysics, Oncology
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Kaur P, Lu X, Xu Q, Irvin EM, Pappas C, Zhang H, Finkelstein IJ, Shi Z, Tao YJ, Yu H, Wang H. High-speed AFM imaging reveals DNA capture and loop extrusion dynamics by cohesin-NIPBL. The Journal of Biological Chemistry. 105296. PMID 37774974 DOI: 10.1016/j.jbc.2023.105296  0.414
2023 Wojtaszek JL, Hoff KE, Longley MJ, Kaur P, Andres SN, Wang H, Williams RS, Copeland WC. Structure-specific roles for PolG2-DNA complexes in maintenance and replication of mitochondrial DNA. Nucleic Acids Research. PMID 37592734 DOI: 10.1093/nar/gkad679  0.362
2023 Liu M, Pan H, Kaur P, Wang LJ, Jin M, Detwiler AC, Opresko PL, Tao YJ, Wang H, Riehn R. Assembly Path Dependence of Telomeric DNA Compaction by TRF1, TIN2, and SA1. Biophysical Journal. PMID 37081787 DOI: 10.1016/j.bpj.2023.04.014  0.397
2022 Leighton GO, Irvin EM, Kaur P, Liu M, You C, Bhattaram D, Piehler J, Riehn R, Wang H, Pan H, Williams DC. Densely methylated DNA traps Methyl-CpG Binding Domain protein 2 but permits free diffusion by Methyl-CpG Binding Domain protein 3. The Journal of Biological Chemistry. 102428. PMID 36037972 DOI: 10.1016/j.jbc.2022.102428  0.313
2021 Kaur P, Barnes R, Pan H, Detwiler AC, Liu M, Mahn C, Hall J, Messenger Z, You C, Piehler J, Smart RC, Riehn R, Opresko PL, Wang H. TIN2 is an architectural protein that facilitates TRF2-mediated trans- and cis-interactions on telomeric DNA. Nucleic Acids Research. PMID 34883513 DOI: 10.1093/nar/gkab1142  0.398
2021 Kaur P, Pan H, Longley MJ, Copeland WC, Wang H. Using Atomic Force Microscopy to Study the Real Time Dynamics of DNA Unwinding by Mitochondrial Twinkle Helicase. Bio-Protocol. 11: e4139. PMID 34604445 DOI: 10.21769/BioProtoc.4139  0.398
2021 Pan H, Kaur P, Barnes R, Detwiler AC, Sanford SL, Liu M, Xu P, Mahn C, Tang Q, Hao P, Bhattaram D, You C, Gu X, Lu W, Piehler J, et al. Structure, dynamics, and regulation of TRF1-TIN2-mediated trans- and cis-interactions on telomeric DNA. The Journal of Biological Chemistry. 101080. PMID 34403696 DOI: 10.1016/j.jbc.2021.101080  0.399
2020 Pan H, Jin M, Ghadiyaram A, Kaur P, Miller HE, Ta HM, Liu M, Fan Y, Mahn C, Gorthi A, You C, Piehler J, Riehn R, Bishop AJR, Tao YJ, et al. Cohesin SA1 and SA2 are RNA binding proteins that localize to RNA containing regions on DNA. Nucleic Acids Research. PMID 32352519 DOI: 10.1093/Nar/Gkaa284  0.403
2020 Kaur P, Longley MJ, Pan H, Wang W, Countryman P, Wang H, Copeland WC. Single-molecule level structural dynamics of DNA unwinding by human mitochondrial Twinkle helicase. The Journal of Biological Chemistry. PMID 32213598 DOI: 10.1074/Jbc.Ra120.012795  0.432
2020 Liu M, Movahed S, Dangi S, Pan H, Kaur P, Bilinovich SM, Faison EM, Leighton GO, Wang H, Williams DC, Riehn R. DNA looping by two 5-methylcytosine-binding proteins quantified using nanofluidic devices. Epigenetics & Chromatin. 13: 18. PMID 32178718 DOI: 10.1186/S13072-020-00339-7  0.413
2019 Kaur P, Barnes R, Pan H, Opresko P, Riehn R, Wang H. Single-Molecule Study of TRF2 Mediated DNA Compaction using Physiologically Relevant Long Telomeric DNA Biophysical Journal. 116: 505a. DOI: 10.1016/J.Bpj.2018.11.2725  0.44
2018 Kaur P, Longley MJ, Pan H, Wang H, Copeland WC. Single-molecule DREEM imaging reveals DNA wrapping around human mitochondrial single-stranded DNA binding protein. Nucleic Acids Research. PMID 30256971 DOI: 10.1093/Nar/Gky875  0.474
2017 Countryman P, Fan Y, Gorthi A, Pan H, Strickland J, Kaur P, Wang X, Lin J, Lei X, White C, You C, Wirth N, Tessmer I, Pieler J, Riehn R, et al. Cohesin SA2 is a sequence independent DNA binding protein that recognizes DNA replication and repair intermediates. The Journal of Biological Chemistry. PMID 29175904 DOI: 10.1074/Jbc.M117.806406  0.479
2017 LeBlanc S, Wilkins H, Li Z, Kaur P, Wang H, Erie DA. Using Atomic Force Microscopy to Characterize the Conformational Properties of Proteins and Protein-DNA Complexes That Carry Out DNA Repair. Methods in Enzymology. 592: 187-212. PMID 28668121 DOI: 10.1016/Bs.Mie.2017.04.004  0.468
2017 Pan H, Bilinovich SM, Kaur P, Riehn R, Wang H, Williams DC. CpG and methylation-dependent DNA binding and dynamics of the methylcytosine binding domain 2 protein at the single-molecule level. Nucleic Acids Research. PMID 28637186 DOI: 10.1093/Nar/Gkx548  0.47
2017 Adkins NL, Swygert SG, Kaur P, Niu H, Grigoryev SA, Sung P, Wang H, Peterson CL. Nucleosome-like, ssDNA-histone octamer complexes and the implication for DNA double-strand break repair. The Journal of Biological Chemistry. PMID 28202543 DOI: 10.1074/Jbc.M117.776369  0.446
2017 Bilinovich SM, Pan H, Kaur P, Wang H, Williams DC. Walking the DNA Methylation Tightrope: The Involvement of Intrinsically Disordered Regions of Transcription Factors Biophysical Journal. 112: 207a. DOI: 10.1016/J.Bpj.2016.11.1144  0.455
2017 Erie D, Bradford K, Wilkins H, Bower J, Wang Z, Gauer J, Satusky M, Qiu R, Weninger K, Kaur P, Wang H. Single Molecule Fluorescence and Atomic Force Microscopy Studies of DNA Repair Biophysical Journal. 112: 7a. DOI: 10.1016/J.Bpj.2016.11.061  0.493
2016 Lin J, Countryman P, Chen H, Pan H, Fan Y, Jiang Y, Kaur P, Miao W, Gurgel G, You C, Piehler J, Kad NM, Riehn R, Opresko PL, Smith S, et al. Functional interplay between SA1 and TRF1 in telomeric DNA binding and DNA-DNA pairing. Nucleic Acids Research. PMID 27298259 DOI: 10.1093/Nar/Gkw518  0.485
2016 Kaur P, Wu D, Lin J, Countryman P, Bradford KC, Erie DA, Riehn R, Opresko PL, Wang H. Enhanced electrostatic force microscopy reveals higher-order DNA looping mediated by the telomeric protein TRF2. Scientific Reports. 6: 20513. PMID 26856421 DOI: 10.1038/Srep20513  0.49
2016 Wu D, Kaur P, Li ZM, Bradford KC, Wang H, Erie DA. Visualizing the Path of DNA through Proteins Using DREEM Imaging. Molecular Cell. PMID 26774284 DOI: 10.1016/J.Molcel.2015.12.012  0.475
2016 Benarroch-Popivker D, Pisano S, Mendez-Bermudez A, Lototska L, Kaur P, Bauwens S, Djerbi N, Latrick CM, Fraisier V, Pei B, Gay A, Jaune E, Foucher K, Cherfils-Vicini J, Aeby E, et al. TRF2-Mediated Control of Telomere DNA Topology as a Mechanism for Chromosome-End Protection. Molecular Cell. PMID 26774283 DOI: 10.1016/J.Molcel.2015.12.009  0.434
2015 Schneeweis LA, Obenauer-Kutner L, Kaur P, Yamniuk AP, Tamura J, Jaffe N, O'Mara BW, Lindsay S, Doyle M, Bryson J. Comparison of Ensemble and Single Molecule Methods for Particle Characterization and Binding Analysis of a PEGylated Single-Domain Antibody. Journal of Pharmaceutical Sciences. PMID 26343417 DOI: 10.1002/Jps.24624  0.525
2015 kaur P. Enhanced Electrostatic Force Microscopy Imaging Reveals Mechanism of TRF2 Mediated DNA Compaction Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.914  0.497
2015 Countryman PJ, Lin J, Kaur P, Brennan E, Chen H, You C, Piehler J, Tao YJ, Wang H. Determining the DNA Diffusion Behavior of SA2 on Various DNA Substrates Biophysical Journal. 108: 397a. DOI: 10.1016/J.Bpj.2014.11.2177  0.481
2015 Lin J, Chen H, Kaur P, Miao W, Countryman P, You C, Piehler J, Tao YJ, Smith S, Wang H. Single-Molecule Imaging Reveals Dynamics of SA1-TRF1 Interactions on Telomeric DNA Biophysical Journal. 108: 206a. DOI: 10.1016/J.Bpj.2014.11.1138  0.461
2015 Wang H, Lin J, Kaur P, Countryman P, Opresko P, Smith S, Tao J. Revealing Structure and Dynamics of Telomere Maintenance Proteins on DNA: One Molecule at a Time Biophysical Journal. 108: 7a. DOI: 10.1016/J.Bpj.2014.11.059  0.489
2014 Roushan M, Kaur P, Karpusenko A, Countryman PJ, Ortiz CP, Fang Lim S, Wang H, Riehn R. Probing transient protein-mediated DNA linkages using nanoconfinement. Biomicrofluidics. 8: 034113. PMID 25379073 DOI: 10.1063/1.4882775  0.464
2014 Swygert SG, Manning BJ, Senapati S, Kaur P, Lindsay S, Demeler B, Peterson CL. Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres. Nature Communications. 5: 4751. PMID 25163529 DOI: 10.1038/Ncomms5751  0.546
2014 Lin J, Kaur P, Countryman P, Opresko PL, Wang H. Unraveling secrets of telomeres: one molecule at a time. Dna Repair. 20: 142-53. PMID 24569170 DOI: 10.1016/J.Dnarep.2014.01.012  0.364
2014 Lin J, Countryman P, Buncher N, Kaur P, E L, Zhang Y, Gibson G, You C, Watkins SC, Piehler J, Opresko PL, Kad NM, Wang H. TRF1 and TRF2 use different mechanisms to find telomeric DNA but share a novel mechanism to search for protein partners at telomeres. Nucleic Acids Research. 42: 2493-504. PMID 24271387 DOI: 10.1093/Nar/Gkt1132  0.458
2013 Lormand JD, Buncher N, Murphy CT, Kaur P, Lee MY, Burgers P, Wang H, Kunkel TA, Opresko PL. DNA polymerase δ stalls on telomeric lagging strand templates independently from G-quadruplex formation. Nucleic Acids Research. 41: 10323-33. PMID 24038470 DOI: 10.1093/Nar/Gkt813  0.334
2013 Tessmer I, Kaur P, Lin J, Wang H. Investigating bioconjugation by atomic force microscopy. Journal of Nanobiotechnology. 11: 25. PMID 23855448 DOI: 10.1186/1477-3155-11-25  0.356
2012 Kaur P, Plochberger B, Costa P, Cope SM, Vaiana SM, Lindsay S. Hydrophobicity of methylated DNA as a possible mechanism for gene silencing. Physical Biology. 9: 065001. PMID 23196865 DOI: 10.1088/1478-3975/9/6/065001  0.574
2011 Kaur P, Qiang-Fu, Fuhrmann A, Ros R, Kutner LO, Schneeweis LA, Navoa R, Steger K, Xie L, Yonan C, Abraham R, Grace MJ, Lindsay S. Antibody-unfolding and metastable-state binding in force spectroscopy and recognition imaging. Biophysical Journal. 100: 243-50. PMID 21190677 DOI: 10.1016/J.Bpj.2010.11.050  0.503
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