Dennis P. Wall - Publications

Affiliations: 
Center for Biomedical Informatics Harvard Medical School, Boston, MA, United States 

58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Washington P, Leblanc E, Dunlap K, Penev Y, Kline A, Paskov K, Sun MW, Chrisman B, Stockham N, Varma M, Voss C, Haber N, Wall DP. Precision Telemedicine through Crowdsourced Machine Learning: Testing Variability of Crowd Workers for Video-Based Autism Feature Recognition. Journal of Personalized Medicine. 10. PMID 32823538 DOI: 10.3390/Jpm10030086  0.325
2020 Sun MW, Moretti S, Paskov KM, Stockham NT, Varma M, Chrisman BS, Washington PY, Jung JY, Wall DP. Game theoretic centrality: a novel approach to prioritize disease candidate genes by combining biological networks with the Shapley value. Bmc Bioinformatics. 21: 356. PMID 32787845 DOI: 10.1186/S12859-020-03693-1  0.371
2020 Kalantarian H, Jedoui K, Dunlap K, Schwartz J, Washington P, Husic A, Tariq Q, Ning M, Kline A, Wall DP. The Performance of Emotion Classifiers for Children With Parent-Reported Autism: Quantitative Feasibility Study. Jmir Mental Health. 7: e13174. PMID 32234701 DOI: 10.2196/13174  0.36
2020 Abbas H, Garberson F, Liu-Mayo S, Glover E, Wall DP. Multi-modular AI Approach to Streamline Autism Diagnosis in Young Children. Scientific Reports. 10: 5014. PMID 32193406 DOI: 10.1038/S41598-020-61213-W  0.306
2019 Washington P, Park N, Srivastava P, Voss C, Kline A, Varma M, Tariq Q, Kalantarian H, Schwartz J, Patnaik R, Chrisman B, Stockham N, Paskov K, Haber N, Wall DP. Data-Driven Diagnostics and the Potential of Mobile Artificial Intelligence for Digital Therapeutic Phenotyping in Computational Psychiatry. Biological Psychiatry. Cognitive Neuroscience and Neuroimaging. PMID 32085921 DOI: 10.1016/J.Bpsc.2019.11.015  0.365
2019 Kalantarian H, Jedoui K, Washington P, Tariq Q, Dunlap K, Schwartz J, Wall DP. Labeling images with facial emotion and the potential for pediatric healthcare. Artificial Intelligence in Medicine. 98: 77-86. PMID 31521254 DOI: 10.1016/J.Artmed.2019.06.004  0.335
2019 Voss C, Haber N, Wall DP. The Potential for Machine Learning-Based Wearables to Improve Socialization in Teenagers and Adults With Autism Spectrum Disorder-Reply. Jama Pediatrics. 173: 1106-1106. PMID 31498377 DOI: 10.1001/Jamapediatrics.2019.2969  0.31
2019 Ruzzo EK, Pérez-Cano L, Jung JY, Wang LK, Kashef-Haghighi D, Hartl C, Singh C, Xu J, Hoekstra JN, Leventhal O, Leppä VM, Gandal MJ, Paskov K, Stockham N, Polioudakis D, ... ... Wall DP, et al. Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks. Cell. 178: 850-866.e26. PMID 31398340 DOI: 10.1016/J.Cell.2019.07.015  0.413
2019 Ning M, Daniels J, Schwartz J, Dunlap K, Washington P, Kalantarian H, Du M, Wall DP. Identification and Quantification of Gaps in Access to Autism Resources in the United States: An Infodemiological Study. Journal of Medical Internet Research. 21: e13094. PMID 31293243 DOI: 10.2196/13094  0.312
2019 Washington P, Kalantarian H, Tariq Q, Schwartz J, Dunlap K, Chrisman B, Varma M, Ning M, Kline A, Stockham N, Paskov K, Voss C, Haber N, Wall DP. Validity of Online Screening for Autism: Crowdsourcing Study Comparing Paid and Unpaid Diagnostic Tasks. Journal of Medical Internet Research. 21: e13668. PMID 31124463 DOI: 10.2196/13668  0.337
2019 Tariq Q, Fleming SL, Schwartz JN, Dunlap K, Corbin C, Washington P, Kalantarian H, Khan NZ, Darmstadt GL, Wall DP. Detecting Developmental Delay and Autism Through Machine Learning Models Using Home Videos of Bangladeshi Children: Development and Validation Study. Journal of Medical Internet Research. 21: e13822. PMID 31017583 DOI: 10.2196/13822  0.36
2019 Voss C, Schwartz J, Daniels J, Kline A, Haber N, Washington P, Tariq Q, Robinson TN, Desai M, Phillips JM, Feinstein C, Winograd T, Wall DP. Effect of Wearable Digital Intervention for Improving Socialization in Children With Autism Spectrum Disorder: A Randomized Clinical Trial. Jama Pediatrics. PMID 30907929 DOI: 10.1001/Jamapediatrics.2019.0285  0.336
2018 Tariq Q, Daniels J, Schwartz JN, Washington P, Kalantarian H, Wall DP. Mobile detection of autism through machine learning on home video: A development and prospective validation study. Plos Medicine. 15: e1002705. PMID 30481180 DOI: 10.1371/Journal.Pmed.1002705  0.344
2018 Abbas H, Garberson F, Glover E, Wall DP. Machine learning approach for early detection of autism by combining questionnaire and home video screening. Journal of the American Medical Informatics Association : Jamia. PMID 29741630 DOI: 10.1093/Jamia/Ocy039  0.343
2018 Duda M, Zhang H, Li HD, Wall DP, Burmeister M, Guan Y. Brain-specific functional relationship networks inform autism spectrum disorder gene prediction. Translational Psychiatry. 8: 56. PMID 29507298 DOI: 10.1038/S41398-018-0098-6  0.41
2018 Daniels J, Haber N, Voss C, Schwartz J, Tamura S, Fazel A, Kline A, Washington P, Phillips J, Winograd T, Feinstein C, Wall DP. Feasibility Testing of a Wearable Behavioral Aid for Social Learning in Children with Autism. Applied Clinical Informatics. 9: 129-140. PMID 29466819 DOI: 10.1055/S-0038-1626727  0.349
2017 Levy S, Duda M, Haber N, Wall DP. Sparsifying machine learning models identify stable subsets of predictive features for behavioral detection of autism. Molecular Autism. 8: 65. PMID 29270283 DOI: 10.1186/S13229-017-0180-6  0.358
2017 Daniels J, Schwartz J, Albert N, Du M, Wall DP. The GapMap project: a mobile surveillance system to map diagnosed autism cases and gaps in autism services globally. Molecular Autism. 8: 55. PMID 29075431 DOI: 10.1186/S13229-017-0163-7  0.334
2017 Goldfeder RL, Wall DP, Khoury MJ, Ioannidis JPA, Ashley EA. Human Genome Sequencing at the Population Scale: A Primer on High-Throughput DNA Sequencing and Analysis. American Journal of Epidemiology. 186: 1000-1009. PMID 29040395 DOI: 10.1093/Aje/Kww224  0.329
2017 Duda M, Haber N, Daniels J, Wall DP. Crowdsourced validation of a machine-learning classification system for autism and ADHD. Translational Psychiatry. 7: e1133. PMID 28509905 DOI: 10.1038/Tp.2017.86  0.366
2017 Diaz-Beltran L, Esteban FJ, Varma M, Ortuzk A, David M, Wall DP. Cross-disorder comparative analysis of comorbid conditions reveals novel autism candidate genes. Bmc Genomics. 18: 315. PMID 28427329 DOI: 10.1186/S12864-017-3667-9  0.374
2017 Kosmicki JA, Samocha KE, Howrigan DP, Sanders SJ, Slowikowski K, Lek M, Karczewski KJ, Cutler DJ, Devlin B, Roeder K, Buxbaum JD, Neale BM, MacArthur DG, Wall DP, Robinson EB, et al. Refining the role of de novo protein-truncating variants in neurodevelopmental disorders by using population reference samples. Nature Genetics. PMID 28191890 DOI: 10.1038/Ng.3789  0.382
2017 Elshazly H, Souilmi Y, Tonellato PJ, Wall DP, Abouelhoda M. MC-GenomeKey: a multicloud system for the detection and annotation of genomic variants. Bmc Bioinformatics. 18: 49. PMID 28107819 DOI: 10.1186/S12859-016-1454-2  0.324
2016 David MM, Enard D, Ozturk A, Daniels J, Jung JY, Diaz-Beltran L, Wall DP. Comorbid Analysis of Genes Associated with Autism Spectrum Disorders Reveals Differential Evolutionary Constraints. Plos One. 11: e0157937. PMID 27414027 DOI: 10.1371/Journal.Pone.0157937  0.389
2016 Saxe GN, Statnikov A, Fenyo D, Ren J, Li Z, Prasad M, Wall D, Bergman N, Briggs EC, Aliferis C. A Complex Systems Approach to Causal Discovery in Psychiatry. Plos One. 11: e0151174. PMID 27028297 DOI: 10.1371/Journal.Pone.0151174  0.321
2016 Duda M, Daniels J, Wall DP. Clinical Evaluation of a Novel and Mobile Autism Risk Assessment. Journal of Autism and Developmental Disorders. 46: 1953-61. PMID 26873142 DOI: 10.1007/S10803-016-2718-4  0.345
2016 Duda M, Ma R, Haber N, Wall DP. Use of machine learning for behavioral distinction of autism and ADHD. Translational Psychiatry. 6: e732. PMID 26859815 DOI: 10.1038/Tp.2015.221  0.362
2016 Diaz-Beltran L, Esteban FJ, Wall DP. A common molecular signature in ASD gene expression: following Root 66 to autism Translational Psychiatry. 6. PMID 26731442 DOI: 10.1038/Tp.2015.112  0.359
2016 David MM, Babineau BA, Wall DP. Can we accelerate autism discoveries through crowdsourcing? Research in Autism Spectrum Disorders. 32: 80-83. DOI: 10.1016/J.Rasd.2016.09.001  0.352
2015 Duda M, Wall DP. Rising interdisciplinary collaborations refine our understanding of autisms and give hope to more personalized solutions Personalized Medicine. 12: 359-369. PMID 29771659 DOI: 10.2217/Pme.15.8  0.309
2015 Li J, Ma Z, Shi M, Malty RH, Aoki H, Minic Z, Phanse S, Jin K, Wall DP, Zhang Z, Urban AE, Hallmayer J, Babu M, Snyder M. Identification of Human Neuronal Protein Complexes Reveals Biochemical Activities and Convergent Mechanisms of Action in Autism Spectrum Disorders. Cell Systems. 1: 361-374. PMID 26949739 DOI: 10.1016/J.Cels.2015.11.002  0.352
2015 Kosmicki JA, Sochat V, Duda M, Wall DP. Searching for a minimal set of behaviors for autism detection through feature selection-based machine learning. Translational Psychiatry. 5: e514. PMID 25710120 DOI: 10.1038/Tp.2015.7  0.367
2015 Souilmi Y, Jung J, Lancaster A, Gafni E, Amzazi S, Ghazal H, Wall DP, Tonellato PJ. COSMOS: cloud enabled NGS analysis Bmc Bioinformatics. 16: 1-1. DOI: 10.1186/1471-2105-16-S2-A2  0.332
2014 Duda M, Kosmicki JA, Wall DP. Testing the accuracy of an observation-based classifier for rapid detection of autism risk. Translational Psychiatry. 4: e424. PMID 25116834 DOI: 10.1038/Tp.2014.65  0.348
2014 Samocha KE, Robinson EB, Sanders SJ, Stevens C, Sabo A, McGrath LM, Kosmicki JA, Rehnström K, Mallick S, Kirby A, Wall DP, MacArthur DG, Gabriel SB, DePristo M, Purcell SM, et al. A framework for the interpretation of de novo mutation in human disease. Nature Genetics. 46: 944-50. PMID 25086666 DOI: 10.1038/Ng.3050  0.313
2014 Fusaro VA, Daniels J, Duda M, DeLuca TF, D'Angelo O, Tamburello J, Maniscalco J, Wall DP. The potential of accelerating early detection of autism through content analysis of YouTube videos. Plos One. 9: e93533. PMID 24740236 DOI: 10.1371/Journal.Pone.0093533  0.35
2014 Jung JY, DeLuca TF, Nelson TH, Wall DP. A literature search tool for intelligent extraction of disease-associated genes. Journal of the American Medical Informatics Association : Jamia. 21: 399-405. PMID 23999671 DOI: 10.1136/Amiajnl-2012-001563  0.361
2013 Diaz-Beltran L, Cano C, Wall DP, Esteban FJ. Systems biology as a comparative approach to understand complex gene expression in neurological diseases. Behavioral Sciences (Basel, Switzerland). 3: 253-72. PMID 25379238 DOI: 10.3390/Bs3020253  0.353
2013 Issa SA, Kienzler R, El-Kalioby M, Tonellato PJ, Wall D, Bruggmann R, Abouelhoda M. Streaming support for data intensive cloud-based sequence analysis. Biomed Research International. 2013: 791051. PMID 23710461 DOI: 10.1155/2013/791051  0.303
2012 Wall DP, Tonellato PJ. Deriving clinical action from whole-genome analysis. Personalized Medicine. 9: 247-252. PMID 29758797 DOI: 10.2217/Pme.12.32  0.344
2012 Wall DP, Dally R, Luyster R, Jung JY, Deluca TF. Use of artificial intelligence to shorten the behavioral diagnosis of autism. Plos One. 7: e43855. PMID 22952789 DOI: 10.1371/Journal.Pone.0043855  0.386
2012 Wall DP, Kosmicki J, Deluca TF, Harstad E, Fusaro VA. Use of machine learning to shorten observation-based screening and diagnosis of autism. Translational Psychiatry. 2: e100. PMID 22832900 DOI: 10.1038/Tp.2012.10  0.392
2012 Suzuki S, Takai-Igarashi T, Fukuoka Y, Wall DP, Tanaka H, Tonellato PJ. Systems analysis of inflammatory bowel disease based on comprehensive gene information. Bmc Medical Genetics. 13: 25. PMID 22480395 DOI: 10.1186/1471-2350-13-25  0.308
2012 DeLuca TF, Cui J, Jung JY, St Gabriel KC, Wall DP. Roundup 2.0: enabling comparative genomics for over 1800 genomes. Bioinformatics (Oxford, England). 28: 715-6. PMID 22247275 DOI: 10.1093/Bioinformatics/Bts006  0.332
2011 Cui J, DeLuca TF, Jung JY, Wall DP. Detecting biological network organization and functional gene orthologs. Bioinformatics (Oxford, England). 27: 2919-20. PMID 21856738 DOI: 10.1093/Bioinformatics/Btr485  0.341
2011 Esteban FJ, Wall DP. Using game theory to detect genes involved in Autism Spectrum Disorder Top. 19: 121-129. DOI: 10.1007/S11750-009-0111-6  0.375
2010 Kudtarkar P, Deluca TF, Fusaro VA, Tonellato PJ, Wall DP. Cost-effective cloud computing: a case study using the comparative genomics tool, roundup. Evolutionary Bioinformatics Online. 6: 197-203. PMID 21258651 DOI: 10.4137/Ebo.S6259  0.307
2010 Wall DP, Kudtarkar P, Fusaro VA, Pivovarov R, Patil P, Tonellato PJ. Cloud computing for comparative genomics. Bmc Bioinformatics. 11: 259. PMID 20482786 DOI: 10.1186/1471-2105-11-259  0.309
2009 Cano C, Monaghan T, Blanco A, Wall DP, Peshkin L. Collaborative text-annotation resource for disease-centered relation extraction from biomedical text. Journal of Biomedical Informatics. 42: 967-77. PMID 19232400 DOI: 10.1016/J.Jbi.2009.02.001  0.313
2009 Wall DP, Esteban FJ, Deluca TF, Huyck M, Monaghan T, Velez de Mendizabal N, Goñí J, Kohane IS. Comparative analysis of neurological disorders focuses genome-wide search for autism genes. Genomics. 93: 120-9. PMID 18950700 DOI: 10.1016/J.Ygeno.2008.09.015  0.403
2008 Singh S, Wall DP. Testing the accuracy of eukaryotic phylogenetic profiles for prediction of biological function. Evolutionary Bioinformatics Online. 4: 217-23. PMID 19204819 DOI: 10.4137/Ebo.S863  0.335
2007 Wall DP, Deluca T. Ortholog detection using the reciprocal smallest distance algorithm. Methods in Molecular Biology (Clifton, N.J.). 396: 95-110. PMID 18025688 DOI: 10.1007/978-1-59745-515-2_7  0.364
2007 Fisher KM, Wall DP, Yip KL, Mishler BD. Phylogeny of the Calymperaceae with a rank-free systematic treatment Bryologist. 110: 46-73. DOI: 10.1639/0007-2745(2007)110[46:Potcwa]2.0.Co;2  0.302
2006 Deluca TF, Wu IH, Pu J, Monaghan T, Peshkin L, Singh S, Wall DP. Roundup: a multi-genome repository of orthologs and evolutionary distances. Bioinformatics (Oxford, England). 22: 2044-6. PMID 16777906 DOI: 10.1093/Bioinformatics/Btl286  0.365
2005 Wall DP. Origin and rapid diversification of a tropical moss. Evolution; International Journal of Organic Evolution. 59: 1413-24. PMID 16153028 DOI: 10.1111/J.0014-3820.2005.Tb01792.X  0.313
2005 Herbeck JT, Wall DP. Converging on a general model of protein evolution. Trends in Biotechnology. 23: 485-7. PMID 16054255 DOI: 10.1016/J.Tibtech.2005.07.009  0.306
2005 Sivakumaran TA, Shen P, Wall DP, Do BH, Kucheria K, Oefner PJ. Conservation of the RB1 gene in human and primates. Human Mutation. 25: 396-409. PMID 15776430 DOI: 10.1002/Humu.20154  0.309
2002 Wall DP. Use of the nuclear gene glyceraldehyde 3-phosphate dehydrogenase for phylogeny reconstruction of recently diverged lineages in Mitthyridium (Musci: Calymperaceae). Molecular Phylogenetics and Evolution. 25: 10-26. PMID 12383747 DOI: 10.1016/S1055-7903(02)00355-X  0.309
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