Julie Hunkapiller, Ph.D. - Publications

Affiliations: 
2011 Biomedical Sciences University of California, San Francisco, San Francisco, CA 
Area:
Molecular Biology, Cell Biology, Human Development

5/19 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2014 Wetzel-Smith MK, Hunkapiller J, Bhangale TR, Srinivasan K, Maloney JA, Atwal JK, Sa SM, Yaylaoglu MB, Foreman O, Ortmann W, Rathore N, Hansen DV, Tessier-Lavigne M, Mayeux R, et al. A rare mutation in UNC5C predisposes to late-onset Alzheimer's disease and increases neuronal cell death. Nature Medicine. 20: 1452-7. PMID 25419706 DOI: 10.1038/Nm.3736  0.68
2012 Hunkapiller J, Shen Y, Diaz A, Cagney G, McCleary D, Ramalho-Santos M, Krogan N, Ren B, Song JS, Reiter JF. Polycomb-like 3 promotes polycomb repressive complex 2 binding to CpG islands and embryonic stem cell self-renewal. Plos Genetics. 8: e1002576. PMID 22438827 DOI: 10.1371/Journal.Pgen.1002576  0.68
2011 Hunkapiller J, Singla V, Seol A, Reiter JF. The ciliogenic protein Oral-Facial-Digital 1 regulates the neuronal differentiation of embryonic stem cells. Stem Cells and Development. 20: 831-41. PMID 20873986 DOI: 10.1089/Scd.2010.0362  0.68
2010 Walker E, Chang WY, Hunkapiller J, Cagney G, Garcha K, Torchia J, Krogan NJ, Reiter JF, Stanford WL. Polycomb-like 2 associates with PRC2 and regulates transcriptional networks during mouse embryonic stem cell self-renewal and differentiation. Cell Stem Cell. 6: 153-66. PMID 20144788 DOI: 10.1016/J.Stem.2009.12.014  0.68
2010 Singla V, Hunkapiller J, Santos N, Seol AD, Norman AR, Wakenight P, Skarnes WC, Reiter JF. Floxin, a resource for genetically engineering mouse ESCs. Nature Methods. 7: 50-2. PMID 19966808 DOI: 10.1038/Nmeth.1406  0.68
Low-probability matches
2021 Khan Z, Hammer C, Carroll J, Di Nucci F, Acosta SL, Maiya V, Bhangale T, Hunkapiller J, Mellman I, Albert ML, McCarthy MI, Chandler GS. Genetic variation associated with thyroid autoimmunity shapes the systemic immune response to PD-1 checkpoint blockade. Nature Communications. 12: 3355. PMID 34099659 DOI: 10.1038/s41467-021-23661-4  0.01
2020 Chen J, Madireddi S, Nagarkar D, Migdal M, Vander Heiden J, Chang D, Mukhyala K, Selvaraj S, Kadel EE, Brauer MJ, Mariathasan S, Hunkapiller J, Jhunjhunwala S, Albert ML, Hammer C. In silico tools for accurate HLA and KIR inference from clinical sequencing data empower immunogenetics on individual-patient and population scales. Briefings in Bioinformatics. PMID 32940337 DOI: 10.1093/Bib/Bbaa223  0.01
2020 Khan Z, Di Nucci F, Kwan A, Hammer C, Mariathasan S, Rouilly V, Carroll J, Fontes M, Ley Acosta S, Guardino E, Chen-Harris H, Bhangale T, Mellman I, Rosenberg J, Powles T, ... Hunkapiller J, et al. Polygenic risk for skin autoimmunity impacts immune checkpoint blockade in bladder cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 32430334 DOI: 10.1073/Pnas.1922867117  0.01
2019 Simpfendorfer KR, Li W, Shih A, Wen H, Kothari HP, Einsidler EA, Wuster A, Hunkapiller J, Behrens TW, Graham RR, Townsend MJ, Behar DM, Hu R, Greenspan E, Gregersen PK. Influence of genetic copy number variants of the human GLUT3 glucose transporter gene on protein expression, glycolysis and rheumatoid arthritis risk: A genetic replication study. Molecular Genetics and Metabolism Reports. 19: 100470. PMID 30997344 DOI: 10.1016/J.Ymgmr.2019.100470  0.01
2018 Tom J, Chang D, Wuster A, Mukhyala K, Cuenco K, Cowgill A, Vogel J, Reeder J, Yaspan B, Hunkapiller J, Brauer M, Behrens T, Forrest W, Bhangale T. Enabling genome-wide association testing with multiple diseases and no healthy controls. Gene. PMID 30366082 DOI: 10.1016/J.Gene.2018.10.047  0.01
2018 Dressen A, Abbas AR, Cabanski C, Reeder J, Ramalingam TR, Neighbors M, Bhangale TR, Brauer MJ, Hunkapiller J, Reeder J, Mukhyala K, Cuenco K, Tom J, Cowgill A, Vogel J, et al. Analysis of protein-altering variants in telomerase genes and their association with MUC5B common variant status in patients with idiopathic pulmonary fibrosis: a candidate gene sequencing study. The Lancet. Respiratory Medicine. PMID 29891356 DOI: 10.1016/S2213-2600(18)30135-8  0.01
2018 Patin E, Hasan M, Bergstedt J, Rouilly V, Libri V, Urrutia A, Alanio C, Scepanovic P, Hammer C, Jönsson F, Beitz B, Quach H, Lim YW, Hunkapiller J, Zepeda M, et al. Publisher Correction: Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors. Nature Immunology. PMID 29725081 DOI: 10.1038/S41590-018-0105-3  0.01
2018 Haug-Baltzell A, Bhangale TR, Chang D, Dressen A, Yaspan BL, Ortmann W, Brauer MJ, Hunkapiller J, Reeder J, Mukhyala K, Cuenco KT, Tom JA, Cowgill A, Vogel J, Forrest WF, et al. Previously reported placebo-response-associated variants do not predict patient outcomes in inflammatory disease Phase III trial placebo arms. Genes and Immunity. PMID 29550837 DOI: 10.1038/S41435-018-0018-Z  0.01
2018 Patin E, Hasan M, Bergstedt J, Rouilly V, Libri V, Urrutia A, Alanio C, Scepanovic P, Hammer C, Jönsson F, Beitz B, Quach H, Lim YW, Hunkapiller J, Zepeda M, et al. Natural variation in the parameters of innate immune cells is preferentially driven by genetic factors. Nature Immunology. PMID 29476184 DOI: 10.1038/S41590-018-0049-7  0.01
2018 Chang D, Choy D, Bhangale T, Wuster A, Khan Z, Dressen A, Cuenco K, Blanco LR, Arron JR, Wilson M, Pappu R, Yi T, Lafkas D, Staton T, Cai F, ... ... Hunkapiller J, et al. A whole genome sequencing association study of severe, uncontrolled asthma European Respiratory Journal. 52. DOI: 10.1183/13993003.Congress-2018.Oa2194  0.01
2017 Chang D, Nalls MA, Hallgrímsdóttir IB, Hunkapiller J, van der Brug M, Cai F, Kerchner GA, Ayalon G, Bingol B, Sheng M, Hinds D, Behrens TW, Singleton AB, et al. A meta-analysis of genome-wide association studies identifies 17 new Parkinson's disease risk loci. Nature Genetics. PMID 28892059 DOI: 10.1038/Ng.3955  0.01
2017 Tom JA, Reeder J, Forrest WF, Graham RR, Hunkapiller J, Behrens TW, Bhangale TR. Identifying and mitigating batch effects in whole genome sequencing data. Bmc Bioinformatics. 18: 351. PMID 28738841 DOI: 10.1186/S12859-017-1756-Z  0.01
2013 Hunkapiller J, Wetzel M, Bhangale T, Maloney J, Atwal J, Ortmann W, Tessier-Lavigne M, Goate A, Behrens T, Cruchaga C, Watts R, Graham R. P4-329: A rare coding variant alters UNC5C function and predisposes to Alzheimer's disease Alzheimer's & Dementia. 9: P853-P853. DOI: 10.1016/j.jalz.2013.08.163  0.01
2013 Hunkapiller J, Wetzel M, Bhangale T, Maloney J, Atwal J, Ortmann W, Tessier-Lavigne M, Goate A, Behrens T, Cruchaga C, Watts R, Graham R. A rare coding variant alters UNC5C function and predisposes to Alzheimer's disease Alzheimers & Dementia. 9: 311. DOI: 10.1016/J.Jalz.2013.04.125  0.01
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