81 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Kloosterman WP, Wienholds E, Ketting RF, Plasterk RH. Substrate requirements for let-7 function in the developing zebrafish embryo. Nucleic Acids Research. PMID 26969732 DOI: 10.1093/nar/gkw173  0.54
2013 Howe K, Clark MD, Torroja CF, Torrance J, Berthelot C, Muffato M, Collins JE, Humphray S, McLaren K, Matthews L, McLaren S, Sealy I, Caccamo M, Churcher C, Scott C, ... ... Plasterk RH, et al. The zebrafish reference genome sequence and its relationship to the human genome. Nature. 496: 498-503. PMID 23594743 DOI: 10.1038/Nature12111  0.324
2008 Gort EH, van Haaften G, Verlaan I, Groot AJ, Plasterk RH, Shvarts A, Suijkerbuijk KP, van Laar T, van der Wall E, Raman V, van Diest PJ, Tijsterman M, Vooijs M. The TWIST1 oncogene is a direct target of hypoxia-inducible factor-2alpha. Oncogene. 27: 1501-10. PMID 17873906 DOI: 10.1038/Sj.Onc.1210795  0.3
2007 Frische EW, Pellis-van Berkel W, van Haaften G, Cuppen E, Plasterk RH, Tijsterman M, Bos JL, Zwartkruis FJ. RAP-1 and the RAL-1/exocyst pathway coordinate hypodermal cell organization in Caenorhabditis elegans. The Embo Journal. 26: 5083-92. PMID 17989692 DOI: 10.1038/Sj.Emboj.7601922  0.318
2007 Steiner FA, Hoogstrate SW, Okihara KL, Thijssen KL, Ketting RF, Plasterk RH, Sijen T. Structural features of small RNA precursors determine Argonaute loading in Caenorhabditis elegans. Nature Structural & Molecular Biology. 14: 927-33. PMID 17891148 DOI: 10.1038/Nsmb1308  0.707
2007 Kapsimali M, Kloosterman WP, de Bruijn E, Rosa F, Plasterk RH, Wilson SW. MicroRNAs show a wide diversity of expression profiles in the developing and mature central nervous system. Genome Biology. 8: R173. PMID 17711588 DOI: 10.1186/Gb-2007-8-8-R173  0.338
2007 Kloosterman WP, Lagendijk AK, Ketting RF, Moulton JD, Plasterk RH. Targeted inhibition of miRNA maturation with morpholinos reveals a role for miR-375 in pancreatic islet development. Plos Biology. 5: e203. PMID 17676975 DOI: 10.1371/Journal.Pbio.0050203  0.623
2007 Longman D, Plasterk RH, Johnstone IL, Cáceres JF. Mechanistic insights and identification of two novel factors in the C. elegans NMD pathway. Genes & Development. 21: 1075-85. PMID 17437990 DOI: 10.1101/Gad.417707  0.438
2007 Houwing S, Kamminga LM, Berezikov E, Cronembold D, Girard A, van den Elst H, Filippov DV, Blaser H, Raz E, Moens CB, Plasterk RH, Hannon GJ, Draper BW, Ketting RF. A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in Zebrafish. Cell. 129: 69-82. PMID 17418787 DOI: 10.1016/J.Cell.2007.03.026  0.751
2007 Cuppen E, Gort E, Hazendonk E, Mudde J, van de Belt J, Nijman IJ, Guryev V, Plasterk RH. Efficient target-selected mutagenesis in Caenorhabditis elegans: toward a knockout for every gene. Genome Research. 17: 649-58. PMID 17416746 DOI: 10.1101/Gr.6080607  0.347
2007 Hornsten A, Lieberthal J, Fadia S, Malins R, Ha L, Xu X, Daigle I, Markowitz M, O'Connor G, Plasterk R, Li C. APL-1, a Caenorhabditis elegans protein related to the human β-amyloid precursor protein, is essential for viability Proceedings of the National Academy of Sciences of the United States of America. 104: 1971-1976. PMID 17267616 DOI: 10.1073/Pnas.0603997104  0.321
2007 Sijen T, Steiner FA, Thijssen KL, Plasterk RH. Secondary siRNAs result from unprimed RNA synthesis and form a distinct class. Science (New York, N.Y.). 315: 244-7. PMID 17158288 DOI: 10.1126/Science.1136699  0.465
2006 Ketting RF, Tijsterman M, Plasterk RH. Isolation of RNA from C. elegans. Csh Protocols. 2006. PMID 22485697 DOI: 10.1101/Pdb.Prot4321  0.679
2006 Ketting RF, Tijsterman M, Plasterk RH. Detection of si/miRNA in C. elegans by Northern Blot. Csh Protocols. 2006. PMID 22485696 DOI: 10.1101/Pdb.Prot4320  0.622
2006 Ketting RF, Tijsterman M, Plasterk RH. Detection of siRNA in C. elegans Using RNase Protection. Csh Protocols. 2006. PMID 22485695 DOI: 10.1101/Pdb.Prot4319  0.62
2006 Ketting RF, Tijsterman M, Plasterk RH. Cosuppression in C. elegans. Csh Protocols. 2006. PMID 22485694 DOI: 10.1101/Pdb.Prot4318  0.599
2006 Ketting RF, Tijsterman M, Plasterk RH. Introduction of Double-Stranded RNA in C. elegans by Feeding. Csh Protocols. 2006. PMID 22485693 DOI: 10.1101/pdb.prot4317  0.665
2006 Ketting RF, Tijsterman M, Plasterk RH. Introduction of Double-Stranded RNA in C. elegans by Soaking. Csh Protocols. 2006. PMID 22485692 DOI: 10.1101/Pdb.Prot4316  0.691
2006 Ketting RF, Tijsterman M, Plasterk RH. Introduction of Double-Stranded RNA in C. elegans by Injection. Csh Protocols. 2006. PMID 22485691 DOI: 10.1101/Pdb.Prot4315  0.685
2006 Tops BB, Plasterk RH, Ketting RF. The Caenorhabditis elegans Argonautes ALG-1 and ALG-2: almost identical yet different. Cold Spring Harbor Symposia On Quantitative Biology. 71: 189-94. PMID 17381296 DOI: 10.1101/sqb.2006.71.035  0.681
2006 Li Y, Alvarez OA, Gutteling EW, Tijsterman M, Fu J, Riksen JA, Hazendonk E, Prins P, Plasterk RH, Jansen RC, Breitling R, Kammenga JE. Mapping determinants of gene expression plasticity by genetical genomics in C. elegans. Plos Genetics. 2: e222. PMID 17196041 DOI: 10.1371/Journal.Pgen.0020222  0.332
2006 Taniguchi Y, Takeda S, Furutani-Seiki M, Kamei Y, Todo T, Sasado T, Deguchi T, Kondoh H, Mudde J, Yamazoe M, Hidaka M, Mitani H, Toyoda A, Sakaki Y, Plasterk RH, et al. Generation of medaka gene knockout models by target-selected mutagenesis. Genome Biology. 7: R116. PMID 17156454 DOI: 10.1186/Gb-2006-7-12-R116  0.318
2006 Berezikov E, Thuemmler F, van Laake LW, Kondova I, Bontrop R, Cuppen E, Plasterk RH. Diversity of microRNAs in human and chimpanzee brain. Nature Genetics. 38: 1375-7. PMID 17072315 DOI: 10.1038/Ng1914  0.329
2006 Ason B, Darnell DK, Wittbrodt B, Berezikov E, Kloosterman WP, Wittbrodt J, Antin PB, Plasterk RH. Differences in vertebrate microRNA expression. Proceedings of the National Academy of Sciences of the United States of America. 103: 14385-9. PMID 16983084 DOI: 10.1073/Pnas.0603529103  0.361
2006 Takada S, Berezikov E, Yamashita Y, Lagos-Quintana M, Kloosterman WP, Enomoto M, Hatanaka H, Fujiwara S, Watanabe H, Soda M, Choi YL, Plasterk RH, Cuppen E, Mano H. Mouse microRNA profiles determined with a new and sensitive cloning method. Nucleic Acids Research. 34: e115. PMID 16973894 DOI: 10.1093/Nar/Gkl653  0.4
2006 Berezikov E, Van Tetering G, Verheul M, Van De Belt J, Van Laake L, Vos J, Verloop R, Van De Wetering M, Guryev V, Takada S, Van Zonneveld AJ, Mano H, Plasterk R, Cuppen E. Many novel mammalian microRNA candidates identified by extensive cloning and RAKE analysis Genome Research. 16: 1289-1298. PMID 16954537 DOI: 10.1101/Gr.5159906  0.458
2006 Vastenhouw NL, Brunschwig K, Okihara KL, Müller F, Tijsterman M, Plasterk RH. Gene expression: long-term gene silencing by RNAi. Nature. 442: 882. PMID 16929289 DOI: 10.1038/442882a  0.383
2006 van Haaften G, Romeijn R, Pothof J, Koole W, Mullenders LH, Pastink A, Plasterk RH, Tijsterman M. Identification of conserved pathways of DNA-damage response and radiation protection by genome-wide RNAi. Current Biology : Cb. 16: 1344-50. PMID 16824923 DOI: 10.1016/J.Cub.2006.05.047  0.335
2006 Berezikov E, Cuppen E, Plasterk RH. Approaches to microRNA discovery. Nature Genetics. 38: S2-7. PMID 16736019 DOI: 10.1038/Ng1794  0.403
2006 Kloosterman WP, Steiner FA, Berezikov E, de Bruijn E, van de Belt J, Verheul M, Cuppen E, Plasterk RH. Cloning and expression of new microRNAs from zebrafish. Nucleic Acids Research. 34: 2558-69. PMID 16698962 DOI: 10.1093/Nar/Gkl278  0.355
2006 Guryev V, Koudijs MJ, Berezikov E, Johnson SL, Plasterk RH, van Eeden FJ, Cuppen E. Genetic variation in the zebrafish. Genome Research. 16: 491-7. PMID 16533913 DOI: 10.1101/Gr.4791006  0.309
2006 Plasterk RH. Micro RNAs in animal development. Cell. 124: 877-81. PMID 16530032 DOI: 10.1016/j.cell.2006.02.030  0.313
2006 Nelson PT, Baldwin DA, Kloosterman WP, Kauppinen S, Plasterk RH, Mourelatos Z. RAKE and LNA-ISH reveal microRNA expression and localization in archival human brain. Rna (New York, N.Y.). 12: 187-91. PMID 16373485 DOI: 10.1261/Rna.2258506  0.367
2006 Kloosterman WP, Wienholds E, de Bruijn E, Kauppinen S, Plasterk RH. In situ detection of miRNAs in animal embryos using LNA-modified oligonucleotide probes. Nature Methods. 3: 27-9. PMID 16369549 DOI: 10.1038/Nmeth843  0.397
2005 Berezikov E, Plasterk RH. Camels and zebrafish, viruses and cancer: a microRNA update. Human Molecular Genetics. 14: R183-90. PMID 16244316 DOI: 10.1093/Hmg/Ddi271  0.38
2005 Wienholds E, Plasterk RH. MicroRNA function in animal development. Febs Letters. 579: 5911-22. PMID 16111679 DOI: 10.1016/J.Febslet.2005.07.070  0.37
2005 Wienholds E, Kloosterman WP, Miska E, Alvarez-Saavedra E, Berezikov E, de Bruijn E, Horvitz HR, Kauppinen S, Plasterk RH. MicroRNA expression in zebrafish embryonic development. Science (New York, N.Y.). 309: 310-1. PMID 15919954 DOI: 10.1126/Science.1114519  0.39
2005 Robert VJ, Sijen T, van Wolfswinkel J, Plasterk RH. Chromatin and RNAi factors protect the C. elegans germline against repetitive sequences. Genes & Development. 19: 782-7. PMID 15774721 DOI: 10.1101/Gad.332305  0.41
2005 Tops BB, Tabara H, Sijen T, Simmer F, Mello CC, Plasterk RH, Ketting RF. RDE-2 interacts with MUT-7 to mediate RNA interference in Caenorhabditis elegans. Nucleic Acids Research. 33: 347-55. PMID 15653635 DOI: 10.1093/Nar/Gki183  0.706
2005 Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E. Phylogenetic shadowing and computational identification of human microRNA genes. Cell. 120: 21-4. PMID 15652478 DOI: 10.1016/J.Cell.2004.12.031  0.359
2005 May RC, Plasterk RH. RNA interference spreading in C. elegans. Methods in Enzymology. 392: 308-15. PMID 15644189 DOI: 10.1016/S0076-6879(04)92018-6  0.456
2004 van der Linden AM, Plasterk RH. Shotgun cloning of transposon insertions in the genome of Caenorhabditis elegans. Comparative and Functional Genomics. 5: 225-9. PMID 18629154 DOI: 10.1002/Cfg.392  0.35
2004 Robert VJ, Vastenhouw NL, Plasterk RH. RNA interference, transposon silencing, and cosuppression in the Caenorhabditis elegans germ line: similarities and differences. Cold Spring Harbor Symposia On Quantitative Biology. 69: 397-402. PMID 16117673 DOI: 10.1101/sqb.2004.69.397  0.313
2004 Wienholds E, Plasterk RH. Target-selected gene inactivation in zebrafish. Methods in Cell Biology. 77: 69-90. PMID 15602906 DOI: 10.1016/S0091-679X(04)77004-1  0.309
2004 Kloosterman WP, Wienholds E, Ketting RF, Plasterk RH. Substrate requirements for let-7 function in the developing zebrafish embryo. Nucleic Acids Research. 32: 6284-91. PMID 15585662 DOI: 10.1093/Nar/Gkh968  0.653
2004 Denli AM, Tops BB, Plasterk RH, Ketting RF, Hannon GJ. Processing of primary microRNAs by the Microprocessor complex. Nature. 432: 231-5. PMID 15531879 DOI: 10.1038/Nature03049  0.662
2004 van Haaften G, Plasterk RH, Tijsterman M. Genomic instability and cancer: scanning the Caenorhabditis elegans genome for tumor suppressors. Oncogene. 23: 8366-75. PMID 15517018 DOI: 10.1038/Sj.Onc.1208011  0.327
2004 van Haaften G, Vastenhouw NL, Nollen EA, Plasterk RH, Tijsterman M. Gene interactions in the DNA damage-response pathway identified by genome-wide RNA-interference analysis of synthetic lethality. Proceedings of the National Academy of Sciences of the United States of America. 101: 12992-6. PMID 15326288 DOI: 10.1073/Pnas.0403131101  0.409
2004 Ketting RF, Plasterk RH. What's new about RNAi? Meeting on siRNAs and miRNAs. Embo Reports. 5: 762-5. PMID 15272300 DOI: 10.1038/Sj.Embor.7400207  0.679
2004 Blacque OE, Reardon MJ, Li C, McCarthy J, Mahjoub MR, Ansley SJ, Badano JL, Mah AK, Beales PL, Davidson WS, Johnsen RC, Audeh M, Plasterk RH, Baillie DL, Katsanis N, et al. Loss of C. elegans BBS-7 and BBS-8 protein function results in cilia defects and compromised intraflagellar transport. Genes & Development. 18: 1630-42. PMID 15231740 DOI: 10.1101/Gad.1194004  0.313
2004 Vastenhouw NL, Plasterk RH. RNAi protects the Caenorhabditis elegans germline against transposition. Trends in Genetics : Tig. 20: 314-9. PMID 15219396 DOI: 10.1016/J.Tig.2004.04.011  0.47
2004 Nollen EA, Garcia SM, van Haaften G, Kim S, Chavez A, Morimoto RI, Plasterk RH. Genome-wide RNA interference screen identifies previously undescribed regulators of polyglutamine aggregation. Proceedings of the National Academy of Sciences of the United States of America. 101: 6403-8. PMID 15084750 DOI: 10.1073/Pnas.0307697101  0.349
2004 Tijsterman M, Plasterk RH. Dicers at RISC; the mechanism of RNAi. Cell. 117: 1-3. PMID 15066275 DOI: 10.1016/S0092-8674(04)00293-4  0.473
2004 Hilliard MA, Bergamasco C, Arbucci S, Plasterk RH, Bazzicalupo P. Worms taste bitter: ASH neurons, QUI-1, GPA-3 and ODR-3 mediate quinine avoidance in Caenorhabditis elegans. The Embo Journal. 23: 1101-11. PMID 14988722 DOI: 10.1038/Sj.Emboj.7600107  0.618
2004 Berezikov E, Bargmann CI, Plasterk RH. Homologous gene targeting in Caenorhabditis elegans by biolistic transformation. Nucleic Acids Research. 32: e40. PMID 14982959 DOI: 10.1093/Nar/Gnh033  0.567
2004 Tijsterman M, May RC, Simmer F, Okihara KL, Plasterk RH. Genes required for systemic RNA interference in Caenorhabditis elegans. Current Biology : Cb. 14: 111-6. PMID 14738731 DOI: 10.1016/J.Cub.2003.12.029  0.449
2003 Cuppen E, van der Linden AM, Jansen G, Plasterk RH. Proteins interacting with Caenorhabditis elegans Galpha subunits. Comparative and Functional Genomics. 4: 479-91. PMID 18629017 DOI: 10.1002/Cfg.318  0.327
2003 Sijen T, Plasterk RH. Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi. Nature. 426: 310-4. PMID 14628056 DOI: 10.1038/Nature02107  0.486
2003 Wienholds E, van Eeden F, Kosters M, Mudde J, Plasterk RH, Cuppen E. Efficient target-selected mutagenesis in zebrafish. Genome Research. 13: 2700-7. PMID 14613981 DOI: 10.1101/Gr.1725103  0.326
2003 Simmer F, Moorman C, van der Linden AM, Kuijk E, van den Berghe PV, Kamath RS, Fraser AG, Ahringer J, Plasterk RH. Genome-wide RNAi of C. elegans using the hypersensitive rrf-3 strain reveals novel gene functions. Plos Biology. 1: E12. PMID 14551910 DOI: 10.1371/Journal.Pbio.0000012  0.418
2003 Wienholds E, Koudijs MJ, van Eeden FJ, Cuppen E, Plasterk RH. The microRNA-producing enzyme Dicer1 is essential for zebrafish development. Nature Genetics. 35: 217-8. PMID 14528306 DOI: 10.1038/Ng1251  0.352
2003 Caudy AA, Ketting RF, Hammond SM, Denli AM, Bathoorn AM, Tops BB, Silva JM, Myers MM, Hannon GJ, Plasterk RH. A micrococcal nuclease homologue in RNAi effector complexes. Nature. 425: 411-4. PMID 14508492 DOI: 10.1038/Nature01956  0.693
2003 Vastenhouw NL, Fischer SE, Robert VJ, Thijssen KL, Fraser AG, Kamath RS, Ahringer J, Plasterk RH. A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans. Current Biology : Cb. 13: 1311-6. PMID 12906791 DOI: 10.1016/S0960-9822(03)00539-6  0.384
2003 Krijgsveld J, Ketting RF, Mahmoudi T, Johansen J, Artal-Sanz M, Verrijzer CP, Plasterk RH, Heck AJ. Metabolic labeling of C. elegans and D. melanogaster for quantitative proteomics. Nature Biotechnology. 21: 927-31. PMID 12858183 DOI: 10.1038/Nbt848  0.557
2003 Pothof J, van Haaften G, Thijssen K, Kamath RS, Fraser AG, Ahringer J, Plasterk RH, Tijsterman M. Identification of genes that protect the C. elegans genome against mutations by genome-wide RNAi. Genes & Development. 17: 443-8. PMID 12600937 DOI: 10.1101/Gad.1060703  0.383
2002 Tijsterman M, Ketting R, Fischer S, Simmer F, Sijen T, Okihara K, Tops B, Vastenhouw N, Plasterk R. The Mechanism of RNA Interference and the Transposon Silencing in Caenorhabditis elegans. The Scientific World Journal. 2: 3-4. PMID 29973776 DOI: 10.1100/Tsw.2002.2  0.485
2002 Tijsterman M, Ketting RF, Plasterk RH. The genetics of RNA silencing. Annual Review of Genetics. 36: 489-519. PMID 12429701 DOI: 10.1146/Annurev.Genet.36.043002.091619  0.694
2002 Tijsterman M, Okihara KL, Thijssen K, Plasterk RH. PPW-1, a PAZ/PIWI protein required for efficient germline RNAi, is defective in a natural isolate of C. elegans. Current Biology : Cb. 12: 1535-40. PMID 12225671 DOI: 10.1016/S0960-9822(02)01110-7  0.423
2002 Simmer F, Tijsterman M, Parrish S, Koushika SP, Nonet ML, Fire A, Ahringer J, Plasterk RH. Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi. Current Biology : Cb. 12: 1317-9. PMID 12176360 DOI: 10.1016/S0960-9822(02)01041-2  0.483
2002 Wienholds E, Schulte-Merker S, Walderich B, Plasterk RH. Target-selected inactivation of the zebrafish rag1 gene. Science (New York, N.Y.). 297: 99-102. PMID 12098699 DOI: 10.1126/Science.1071762  0.311
2002 Plasterk RH. RNA silencing: the genome's immune system. Science (New York, N.Y.). 296: 1263-5. PMID 12016302 DOI: 10.1126/Science.1072148  0.337
2002 Tijsterman M, Ketting RF, Okihara KL, Sijen T, Plasterk RH. RNA helicase MUT-14-dependent gene silencing triggered in C. elegans by short antisense RNAs. Science (New York, N.Y.). 295: 694-7. PMID 11809977 DOI: 10.1126/Science.1067534  0.701
2001 Sijen T, Fleenor J, Simmer F, Thijssen KL, Parrish S, Timmons L, Plasterk RH, Fire A. On the role of RNA amplification in dsRNA-triggered gene silencing. Cell. 107: 465-76. PMID 11719187 DOI: 10.1016/S0092-8674(01)00576-1  0.479
2001 Ketting RF, Fischer SE, Bernstein E, Sijen T, Hannon GJ, Plasterk RH. Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans. Genes & Development. 15: 2654-9. PMID 11641272 DOI: 10.1101/Gad.927801  0.716
2000 Plasterk RH, Ketting RF. The silence of the genes. Current Opinion in Genetics & Development. 10: 562-7. PMID 10980436 DOI: 10.1016/S0959-437X(00)00128-3  0.654
2000 Ketting RF, Plasterk RH. A genetic link between co-suppression and RNA interference in C. elegans. Nature. 404: 296-8. PMID 10749214 DOI: 10.1038/35005113  0.688
1999 Ketting RF, Haverkamp TH, van Luenen HG, Plasterk RH. Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD. Cell. 99: 133-41. PMID 10535732 DOI: 10.1016/S0092-8674(00)81645-1  0.665
1997 Ketting RF, Fischer SE, Plasterk RH. Target choice determinants of the Tc1 transposon of Caenorhabditis elegans. Nucleic Acids Research. 25: 4041-7. PMID 9321655 DOI: 10.1093/nar/25.20.4041  0.567
1997 van Pouderoyen G, Ketting RF, Perrakis A, Plasterk RH, Sixma TK. Crystal structure of the specific DNA-binding domain of Tc3 transposase of C.elegans in complex with transposon DNA. The Embo Journal. 16: 6044-54. PMID 9312061 DOI: 10.1093/Emboj/16.19.6044  0.552
1985 Plasterk RH, van de Putte P. The invertible P-DNA segment in the chromosome of Escherichia coli. The Embo Journal. 4: 237-42. PMID 3894006 DOI: 10.1002/j.1460-2075.1985.tb02341.x  0.496
1983 Plasterk RH, Brinkman A, van de Putte P. DNA inversions in the chromosome of Escherichia coli and in bacteriophage Mu: relationship to other site-specific recombination systems. Proceedings of the National Academy of Sciences of the United States of America. 80: 5355-8. PMID 6310572 DOI: 10.1073/pnas.80.17.5355  0.498
Show low-probability matches.