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Guillaume F. Chanfreau - Publications

Affiliations: 
Chemistry University of California, Los Angeles, Los Angeles, CA 
Area:
Biochemistry, Systems Biology and Biological Regulation, Metabolism, Aging and Development, Development and Gene Regulation, Proteomics and Bioinformatics
Website:
http://www.chemistry.ucla.edu/directory/chanfreau-guillaume-f
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66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Roy KR, Gabunilas J, Neutel D, Ai M, Samson J, Lyu G, Chanfreau GF. Spliceosomal mutations decouple 3' splice site fidelity from cellular fitness. Biorxiv : the Preprint Server For Biology. PMID 36711521 DOI: 10.1101/2023.01.12.523824  0.357
2022 Liu Y, DeMario S, He K, Gibbs MR, Barr KW, Chanfreau GF. Splicing inactivation generates hybrid mRNA-snoRNA transcripts targeted by cytoplasmic RNA decay. Proceedings of the National Academy of Sciences of the United States of America. 119: e2202473119. PMID 35878033 DOI: 10.1073/pnas.2202473119  0.587
2021 Wang C, Barr KW, Neutel D, Roy K, Liu Y, Chanfreau G. Stress-induced inhibition of mRNA export triggers RNase III-mediated decay of the BDF2 mRNA. Rna (New York, N.Y.). PMID 34497070 DOI: 10.1261/rna.078880.121  0.377
2020 Wang C, Liu Y, DeMario SM, Mandric I, Gonzalez-Figueroa C, Chanfreau GF. Rrp6 Moonlights in an RNA Exosome-Independent Manner to Promote Cell Survival and Gene Expression during Stress. Cell Reports. 31: 107754. PMID 32521279 DOI: 10.1016/J.Celrep.2020.107754  0.458
2019 White JT, Cato T, Deramchi N, Gabunilas J, Roy K, Wang C, Chanfreau GF, Clarke SG. Protein methylation and translation: Role of lysine modification on the function of yeast elongation factor 1A. Biochemistry. PMID 31738538 DOI: 10.1021/Acs.Biochem.9B00818  0.353
2019 Roy K, Chanfreau GF. Robust mapping of polyadenylated and non-polyadenylated RNA 3'-ends at nucleotide resolution by 3́end sequencing. Methods (San Diego, Calif.). PMID 31128237 DOI: 10.1016/J.Ymeth.2019.05.016  0.407
2017 Roy K, Chanfreau GF. A global function for transcription factors in assisting RNA polymerase II termination. Transcription. 1-6. PMID 29106321 DOI: 10.1080/21541264.2017.1300121  0.492
2017 Chanfreau GF. Impact of RNA Modifications and RNA-Modifying Enzymes on Eukaryotic Ribonucleases. The Enzymes. 41: 299-329. PMID 28601225 DOI: 10.1016/Bs.Enz.2017.03.008  0.625
2017 Gillespie A, Gabunilas J, Jen JC, Chanfreau GF. Mutations of EXOSC3/Rrp40p associated with neurological diseases impact ribosomal RNA processing functions of the exosome in S. cerevisiae. Rna (New York, N.Y.). PMID 28053271 DOI: 10.1261/Rna.060004.116  0.442
2016 Roy K, Gabunilas J, Gillespie A, Ngo D, Chanfreau GF. Common genomic elements promote transcriptional and DNA replication roadblocks. Genome Research. PMID 27540088 DOI: 10.1101/Gr.204776.116  0.489
2016 Gabunilas J, Chanfreau G. Splicing-Mediated Autoregulation Modulates Rpl22p Expression in Saccharomyces cerevisiae. Plos Genetics. 12: e1005999. PMID 27097027 DOI: 10.1371/Journal.Pgen.1005999  0.555
2016 Hodko D, Ward T, Chanfreau G. The Rtr1p CTD phosphatase autoregulates its mRNA through a degradation pathway involving the REX exonucleases. Rna (New York, N.Y.). 22: 559-70. PMID 26843527 DOI: 10.1261/rna.055723.115  0.513
2016 Al-Hadid Q, Roy K, Chanfreau G, Clarke SG. Methylation of yeast ribosomal protein Rpl3 promotes translational elongation fidelity. Rna (New York, N.Y.). PMID 26826131 DOI: 10.1261/Rna.054569.115  0.402
2016 Hodko D, Ward T, Chanfreau G. The Rtr1p CTD phosphatase autoregulates its mRNA through a degradation pathway involving the REX exonucleases Rna. 22: 559-570. DOI: 10.1261/Rna.055723.115  0.583
2015 Chanfreau G. Two degrading decades for RNA. Rna (New York, N.Y.). 21: 584-5. PMID 25780149 DOI: 10.1261/Rna.050146.115  0.621
2015 Chanfreau G. Two degrading decades for RNA Rna. 21: 584-585. DOI: 10.1261/rna.050146.115  0.432
2014 Roy K, Chanfreau G. Stress-induced nuclear RNA degradation pathways regulate yeast bromodomain factor 2 to promote cell survival. Plos Genetics. 10: e1004661. PMID 25232960 DOI: 10.1371/Journal.Pgen.1004661  0.516
2014 Dzialo MC, Travaglini KJ, Shen S, Roy K, Chanfreau GF, Loo JA, Clarke SG. Translational roles of elongation factor 2 protein lysine methylation. The Journal of Biological Chemistry. 289: 30511-24. PMID 25231983 DOI: 10.1074/Jbc.M114.605527  0.36
2014 Al-Hadid Q, Roy K, Munroe W, Dzialo MC, Chanfreau GF, Clarke SG. Histidine methylation of yeast ribosomal protein Rpl3p is required for proper 60S subunit assembly. Molecular and Cellular Biology. 34: 2903-16. PMID 24865971 DOI: 10.1128/Mcb.01634-13  0.38
2014 Kawashima T, Douglass S, Gabunilas J, Pellegrini M, Chanfreau GF. Widespread use of non-productive alternative splice sites in Saccharomyces cerevisiae. Plos Genetics. 10: e1004249. PMID 24722551 DOI: 10.1371/Journal.Pgen.1004249  0.819
2013 Chanfreau GF. Zinc'ing down RNA polymerase I Transcription. 4. PMID 24135703 DOI: 10.4161/trns.26594  0.436
2013 Lee YJ, Lee CY, Grzechnik A, Gonzales-Zubiate F, Vashisht AA, Lee A, Wohlschlegel J, Chanfreau GF. RNA polymerase I stability couples cellular growth to metal availability. Molecular Cell. 51: 105-15. PMID 23747013 DOI: 10.1016/J.Molcel.2013.05.005  0.804
2013 Hartman E, Wang Z, Zhang Q, Roy K, Chanfreau G, Feigon J. Intrinsic dynamics of an extended hydrophobic core in the S. cerevisiae RNase III dsRBD contributes to recognition of specific RNA binding sites Journal of Molecular Biology. 425: 546-562. PMID 23201338 DOI: 10.1016/J.Jmb.2012.11.025  0.433
2012 Roy K, Chanfreau GF. The Diverse Functions of Fungal RNase III Enzymes in RNA Metabolism. The Enzymes. 31: 213-35. PMID 27166447 DOI: 10.1016/B978-0-12-404740-2.00010-0  0.602
2012 Lee YJ, Huang X, Kropat J, Henras A, Merchant SS, Dickson RC, Chanfreau GF. Sphingolipid signaling mediates iron toxicity. Cell Metabolism. 16: 90-6. PMID 22768841 DOI: 10.1016/J.Cmet.2012.06.004  0.527
2012 Sayani S, Chanfreau GF. Sequential RNA degradation pathways provide a fail-safe mechanism to limit the accumulation of unspliced transcripts in Saccharomyces cerevisiae Rna. 18: 1563-1572. PMID 22753783 DOI: 10.1261/Rna.033779.112  0.83
2012 Egecioglu DE, Kawashima TR, Chanfreau GF. Quality control of MATa1 splicing and exon skipping by nuclear RNA degradation. Nucleic Acids Research. 40: 1787-96. PMID 22021379 DOI: 10.1093/Nar/Gkr864  0.773
2012 Roy K, Chanfreau GF. The Diverse Functions of Fungal RNase III Enzymes in RNA Metabolism Enzymes. 31: 213-235. DOI: 10.1016/B978-0-12-404740-2.00010-0  0.339
2011 Wang Z, Hartman E, Roy K, Chanfreau G, Feigon J. Structure of a yeast RNase III dsRBD complex with a noncanonical RNA substrate provides new insights into binding specificity of dsRBDs Structure. 19: 999-1010. PMID 21742266 DOI: 10.1016/J.Str.2011.03.022  0.436
2011 Toesca I, Nery CR, Fernandez CF, Sayani S, Chanfreau GF. Cryptic transcription mediates repression of subtelomeric metal homeostasis genes Plos Genetics. 7. PMID 21738494 DOI: 10.1371/Journal.Pgen.1002163  0.734
2011 Koo BK, Park CJ, Fernandez CF, Chim N, Ding Y, Chanfreau G, Feigon J. Structure of H/ACA RNP protein Nhp2p reveals cis/trans isomerization of a conserved proline at the RNA and Nop10 binding interface Journal of Molecular Biology. 411: 927-942. PMID 21708174 DOI: 10.1016/J.Jmb.2011.06.022  0.426
2011 Egecioglu DE, Chanfreau G. Proofreading and spellchecking: A two-tier strategy for pre-mRNA splicing quality control Rna. 17: 383-389. PMID 21205840 DOI: 10.1261/Rna.2454711  0.781
2010 Chanfreau GF. A dual role for RNA splicing signals Embo Reports. 11: 720-721. PMID 20877291 DOI: 10.1038/Embor.2010.148  0.577
2010 Chanfreau G. InvIGOrating mRNAs during Quiescence. Molecular Cell. 38: 317-8. PMID 20471936 DOI: 10.1016/J.Molcel.2010.04.020  0.355
2009 Kawashima T, Pellegrini M, Chanfreau GF. Nonsense-mediated mRNA decay mutes the splicing defects of spliceosome component mutations. Rna (New York, N.Y.). 15: 2236-47. PMID 19850912 DOI: 10.1261/Rna.1736809  0.81
2009 Singh M, Gonzales FA, Cascio D, Heckmann N, Chanfreau G, Feigon J. Structure and functional studies of the CS domain of the essential H/ACA ribonucleoparticle assembly protein SHQ1. The Journal of Biological Chemistry. 284: 1906-16. PMID 19019820 DOI: 10.1074/Jbc.M807337200  0.449
2008 Sayani S, Janis M, Lee CY, Toesca I, Chanfreau GF. Widespread Impact of Nonsense-Mediated mRNA Decay on the Yeast Intronome Molecular Cell. 31: 360-370. PMID 18691968 DOI: 10.1016/J.Molcel.2008.07.005  0.809
2006 Oberstrass FC, Lee A, Stefl R, Janis M, Chanfreau G, Allain FHT. Shape-specific recognition in the structure of the Vts1p SAM domain with RNA Nature Structural and Molecular Biology. 13: 160-167. PMID 16429156 DOI: 10.1038/Nsmb1038  0.643
2006 Egecioglu DE, Henras AK, Chanfreau GF. Contributions of Trf4p- And Trf5p-dependent polyadenylation to the processing and degradative functions of the yeast nuclear exosome Rna. 12: 26-32. PMID 16373491 DOI: 10.1261/Rna.2207206  0.817
2005 Chanfreau GF. CUTting genetic noise by polyadenylation-induced RNA degradation Trends in Cell Biology. 15: 635-637. PMID 16243527 DOI: 10.1016/J.Tcb.2005.10.004  0.608
2005 Lee A, Henras AK, Chanfreau G. Multiple RNA surveillance pathways limit aberrant expression of iron uptake mRNAs and prevent iron toxicity in S. cerevisiae Molecular Cell. 19: 39-51. PMID 15989963 DOI: 10.1016/J.Molcel.2005.05.021  0.549
2005 Henras AK, Sam M, Hiley SL, Haihong WU, Hughes TR, Feigon J, Chanfreau GF. Biochemical and genomic analysis of substrate recognition by the double-stranded RNA binding domain of yeast RNase III Rna. 11: 1225-1237. PMID 15987808 DOI: 10.1261/Rna.2760705  0.519
2005 Zer C, Chanfreau G. Regulation and surveillance of normal and 3′-extended forms of the yeast aci-reductone dioxygenase mRNA by RNase III cleavage and exonucleolytic degradation Journal of Biological Chemistry. 280: 28997-29003. PMID 15967792 DOI: 10.1074/Jbc.M505913200  0.526
2005 Pok KY, Hoareau C, Froment C, Monsarrat B, Henry Y, Chanfreau G. Cotranscriptional recruitment of the pseudouridylsynthetase Cbf5p and of the RNA binding protein Naf1p during H/ACA snoRNP assembly Molecular and Cellular Biology. 25: 3295-3304. PMID 15798213 DOI: 10.1128/Mcb.25.8.3295-3304.2005  0.52
2005 Sam M, Henras AK, Chanfreau G. A conserved major groove antideterminant for Saccharomyces cerevisiae RNase III recognition Biochemistry. 44: 4181-4187. PMID 15766245 DOI: 10.1021/Bi047483U  0.564
2004 Henras AK, Bertrand E, Chanfreau G. A cotranscriptional model for 3′-end processing of the Saccharomyces cerevisiae pre-ribosomal RNA precursor Rna. 10: 1572-1585. PMID 15337846 DOI: 10.1261/Rna.7750804  0.563
2004 Wu H, Henras A, Chanfreau G, Feigon J. Structural basis for of the AGNN tetraloop RNA fold by the double-stranded RNA-binding domain of Rnt1p RNase III Proceedings of the National Academy of Sciences of the United States of America. 101: 8307-8312. PMID 15150409 DOI: 10.1073/Pnas.0402627101  0.547
2003 Lee CY, Lee A, Chanfreau G. The roles of endonucleolytic cleavage and exonucleolytic digestion in the 5′-end processing of S. cerevisiae box C/D snoRNAs Rna. 9: 1362-1370. PMID 14561886 DOI: 10.1261/Rna.5126203  0.741
2003 Chanfreau G. Conservation of RNase III processing pathways and specificity in hemiascomycetes Eukaryotic Cell. 2: 901-909. PMID 14555472 DOI: 10.1128/Ec.2.5.901-909.2003  0.501
2003 Danin-Kreiselman M, Lee CY, Chanfreau G. RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns Molecular Cell. 11: 1279-1289. PMID 12769851 DOI: 10.1016/S1097-2765(03)00137-0  0.77
2002 Yang PK, Rotondo G, Porras T, Legrain P, Chanfreau G. The Shq1p·Naf1p complex is required for box H/ACA small nucleolar ribonucleoprotein particle biogenesis Journal of Biological Chemistry. 277: 45235-45242. PMID 12228251 DOI: 10.1074/Jbc.M207669200  0.689
2001 Wu H, Yang PK, Butcher SE, Kang S, Chanfreau G, Feigon J. A novel family of RNA tetraloop structure forms the recognition site for Saccharomyces cerevisiae RNase III. The Embo Journal. 20: 7240-9. PMID 11743000 DOI: 10.1093/Emboj/20.24.7240  0.74
2000 Kufel J, Allmang C, Chanfreau G, Petfalski E, Lafontaine DLJ, Tollervey D. Precursors to the U3 small nucleolar RNA lack small nucleolar RNP proteins but are stabilized by la binding Molecular and Cellular Biology. 20: 5415-5424. PMID 10891482 DOI: 10.1128/Mcb.20.15.5415-5424.2000  0.451
2000 Chanfreau G, Buckle M, Jacquier A. Recognition of a conserved class of RNA tetraloops by Saccharomyces cerevisiae RNase III Proceedings of the National Academy of Sciences of the United States of America. 97: 3142-3147. PMID 10716739 DOI: 10.1073/Pnas.97.7.3142  0.712
1999 Allmang C, Kufel J, Chanfreau G, Mitchell P, Petfalski E, Tollervey D. Functions of the exosome in rRNA, snoRNA and snRNA synthesis Embo Journal. 18: 5399-5410. PMID 10508172 DOI: 10.1093/Emboj/18.19.5399  0.552
1999 Chanfreau G, Gouyette C, Schwer B, Jacquier A. Trans-complementation of the second step of pre-mRNA splicing by exogenous 5' exons Rna. 5: 876-882. PMID 10411131 DOI: 10.1017/S1355838299990544  0.729
1998 Chanfreau G, Legrain P, Jacquier A. Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism Journal of Molecular Biology. 284: 975-988. PMID 9837720 DOI: 10.1006/Jmbi.1998.2237  0.692
1998 Chanfreau G, Rotondo G, Legrain P, Jacquier A. Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1 Embo Journal. 17: 3726-3737. PMID 9649442 DOI: 10.1093/Emboj/17.13.3726  0.724
1998 Nolte A, Chanfreau G, Jacquier A. Influence of substrate structure on in vitro ribozyme activity of a group II intron Rna. 4: 694-708. PMID 9622128 DOI: 10.1017/S1355838298980165  0.666
1997 Chanfreau G, Elela SA, Ares M, Guthrie C. Alternative 3'-end processing of U5 snRNA by RNase III Genes and Development. 11: 2741-2751. PMID 9334335 DOI: 10.1101/Gad.11.20.2741  0.679
1996 Chanfreau G, Noble SM, Guthrie C. Essential yeast protein with unexpected similarity to subunits of mammalian cleavage and polyadenylation specificity factor (CPSF) Science. 274: 1511-1514. PMID 8929408 DOI: 10.1126/Science.274.5292.1511  0.65
1996 Chanfreau G, Jacquier A. An RNA conformational change between the two chemical steps of group II self-splicing Embo Journal. 15: 3466-3476. PMID 8670849 DOI: 10.1002/J.1460-2075.1996.Tb00713.X  0.623
1994 Chanfreau G, Legrain P, Dujon B, Jacquier A. Interaction between the first and last nucleotides of pre-mRNA introns is a determinant of 3′ splice site selection in S.cerevisiae Nucleic Acids Research. 22: 1981-1987. PMID 8029003 DOI: 10.1093/Nar/22.11.1981  0.727
1994 Chanfreau G, Jacquier A. Catalytic site components common to both splicing steps of a group II intron Science. 266: 1383-1387. PMID 7973729 DOI: 10.1126/Science.7973729  0.593
1994 Legrain P, Chanfreau G. Pre-mRNA splicing: From intron recognition to catalysis Bulletin De L'Institut Pasteur. 92: 153-179.  0.382
1993 Chanfreau G, Jacquier A. Interaction of intronic boundaries is required for the second splicing step efficiency of a group II intron Embo Journal. 12: 5173-5180. PMID 8262060 DOI: 10.1002/J.1460-2075.1993.Tb06212.X  0.648
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